Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 5.9e-123 444.1 212 100.0
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 4.9e-93 344.7 208 82.2
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 7.1e-92 340.9 211 79.6
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 7.8e-91 337.4 201 84.1
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-79 299.3 211 65.9
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 4.9e-77 291.6 211 66.4
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-71 273.9 211 61.6
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-71 273.1 211 62.6
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 4.9e-69 265.0 211 60.7
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 3.0e-66 255.8 211 60.2
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 8.2e-64 247.7 211 58.3
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 3.2e-60 235.7 211 56.4
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-53 213.8 211 53.6
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 3.1e-47 192.6 177 55.4
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-46 190.7 200 46.5
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-45 186.8 200 45.5
BcaC03g16486 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-44 183.3 177 54.2
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-43 179.9 167 50.9
BcaC05g28043 Brassica carinata HOM05D006121 ORTHO05D009559 3.6e-43 179.1 177 53.1
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 7.9e-43 177.9 204 44.1
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 1.0e-42 177.6 206 43.7
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-40 170.2 199 43.7
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 8.2e-40 167.9 166 48.8
BcaC02g09767 Brassica carinata HOM05D006121 ORTHO05D009559 8.2e-40 167.9 139 59.0
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 8.2e-40 167.9 212 46.7
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-38 163.7 121 64.5
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 2.6e-38 162.9 121 63.6
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 4.5e-38 162.2 200 42.5
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-37 159.8 159 47.8
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 8.5e-37 157.9 168 47.0
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 9.4e-36 154.5 200 42.0
BcaC04g20823 Brassica carinata HOM05D006121 ORTHO05D009559 5.7e-33 145.2 147 51.7
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 8.2e-32 141.4 201 38.8
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-31 140.6 159 47.2
BcaC06g35841 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-31 140.6 109 62.4
BcaC07g37265 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-31 139.8 109 64.2
BcaC03g15126 Brassica carinata HOM05D006121 ORTHO05D009559 7.7e-30 134.8 145 50.3
BolC7t41498H Brassica oleracea HOM05D006121 ORTHO05D009559 1.0e-29 134.4 166 41.0
BcaC08g42838 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-29 134.0 91 64.8
BraA06t25079Z Brassica rapa HOM05D006121 ORTHO05D009559 6.1e-27 125.2 121 47.9
BcaC01g00176 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-26 124.4 89 64.0
BcaC03g15823 Brassica carinata HOM05D006121 ORTHO05D009559 4.0e-26 122.5 106 54.7
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 4.0e-26 122.5 125 46.4
BcaC09g50206 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-25 120.9 106 55.7
BcaC02g10718 Brassica carinata HOM05D006121 ORTHO05D009559 4.4e-25 119.0 94 61.7
BcaC04g20594 Brassica carinata HOM05D006121 ORTHO05D009559 5.7e-25 118.6 201 39.3
BolC9t56759H Brassica oleracea HOM05D006121 ORTHO05D009559 4.8e-24 115.5 102 55.9
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 1.8e-23 113.6 173 33.5
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.0e-23 111.7 174 33.9
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 9.1e-23 111.3 196 30.1
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 9.1e-23 111.3 196 30.1
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.2e-22 110.9 173 32.4
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.0e-22 110.2 174 33.9
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.7e-22 109.8 196 29.6
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 2.7e-22 109.8 150 33.3
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 2.7e-22 109.8 172 33.1
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 3.5e-22 109.4 139 37.4
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.5e-22 109.4 174 33.3
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.5e-22 109.4 197 31.0
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.5e-22 109.0 174 33.3
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.9e-22 108.6 196 29.6
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.9e-22 108.6 196 29.6
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.7e-22 108.2 173 31.8
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.0e-21 107.8 174 32.8
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 1.3e-21 107.5 172 31.4
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-21 107.1 174 32.8
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-21 107.1 174 32.8
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-21 107.1 197 31.0
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-21 107.1 134 43.3
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 2.9e-21 106.3 206 29.6
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.8e-21 105.9 174 32.8
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.5e-20 104.0 142 38.0
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.5e-20 103.2 142 38.0
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 2.5e-20 103.2 122 36.9
C05p29190 Brassica napus HOM05D006121 ORTHO05D009559 1.6e-19 100.5 84 53.6
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-19 100.5 165 31.5
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.8e-18 97.1 204 31.9
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.8e-18 97.1 153 33.3
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 3.0e-18 96.3 137 35.0
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 3.0e-18 96.3 123 38.2
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 5.2e-18 95.5 136 36.0
BcaC04g22048 Brassica carinata HOM05D006121 ORTHO05D009559 6.8e-18 95.1 81 59.3
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 6.8e-18 95.1 143 35.7
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 8.8e-18 94.7 200 28.5
BcaC08g43697 Brassica carinata HOM05D006121 ORTHO05D009559 6.3e-16 88.6 73 58.9
BcaC03g16745 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-15 87.0 76 56.6
BcaC03g16668 Brassica carinata HOM05D006121 ORTHO05D009559 3.1e-15 86.3 60 63.3
Carub.0007s3212 Capsella rubella HOM05D009492 ORTHO05D011693 4.1e-15 85.9 172 27.3
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 7.0e-15 85.1 123 34.1
BcaC09g51377 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-14 84.3 94 45.7
BolC3t19110H Brassica oleracea HOM05D006121 ORTHO05D043263 7.7e-14 81.6 63 69.8
Carub.0004s0672 Capsella rubella HOM05D009492 ORTHO05D011693 7.7e-14 81.6 172 26.7
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 1.3e-13 80.9 175 26.9
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 2.3e-13 80.1 211 24.6
BcaC04g22047 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-13 79.3 56 62.5
AL8G10170 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.6e-13 78.2 196 24.0
AT1G46696 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 8.6e-13 78.2 151 27.2
BcaB04g17962 Brassica carinata HOM05D006121 ORTHO05D009559 8.6e-13 78.2 89 41.6
BcaC08g43032 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-12 77.8 56 62.5
Carub.0001s3424 Capsella rubella HOM05D009492 ORTHO05D011693 1.1e-12 77.8 181 26.0
A08p08190 Brassica napus HOM05D008596 ORTHO05D003268 1.9e-12 77.0 182 28.6
Carub.0003s2830 Capsella rubella HOM05D009492 ORTHO05D011693 3.3e-12 76.3 162 27.2
AL3G43600 Arabidopsis lyrata HOM05D010629 ORTHO05D005680 4.3e-12 75.9 177 26.0
BolC4t24012H Brassica oleracea HOM05D006121 ORTHO05D009559 7.3e-12 75.1 68 50.0
Carub.0002s1244 Capsella rubella HOM05D010629 ORTHO05D005680 1.6e-11 73.9 186 22.6
BolC5t33453H Brassica oleracea HOM05D003421 ORTHO05D003268 2.1e-11 73.6 158 28.5
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 2.1e-11 73.6 186 22.6
Carub.0007s2123 Capsella rubella HOM05D010629 ORTHO05D005680 2.1e-11 73.6 186 22.6
BolC2t09439H Brassica oleracea HOM05D003421 ORTHO05D003268 2.8e-11 73.2 149 26.8
Carub.0005s0210 Capsella rubella HOM05D010629 ORTHO05D005680 2.8e-11 73.2 187 24.1
Carub.0353s0001 Capsella rubella HOM05D010629 ORTHO05D005680 3.6e-11 72.8 186 24.2
AT3G30230 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 4.7e-11 72.4 113 36.3
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 4.7e-11 72.4 205 26.3
CARHR035710 Cardamine hirsuta HOM05D008458 ORTHO05D010628 6.1e-11 72.0 147 29.9
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 1.4e-10 70.9 168 25.6
BolC4t23765H Brassica oleracea HOM05D003421 ORTHO05D003268 1.8e-10 70.5 161 26.1
A03p66670 Brassica napus HOM05D008596 ORTHO05D003268 2.3e-10 70.1 151 27.2
Carub.0006s2663 Capsella rubella HOM05D009492 ORTHO05D011693 2.3e-10 70.1 111 32.4
BraA05t20949Z Brassica rapa HOM05D006121 ORTHO05D009559 3.0e-10 69.7 88 42.0
CARHR105800 Cardamine hirsuta HOM05D008458 ORTHO05D010628 4.0e-10 69.3 99 36.4
A05p23070 Brassica napus HOM05D008596 ORTHO05D003268 5.2e-10 68.9 151 28.5
Carub.0008s0719 Capsella rubella HOM05D009492 ORTHO05D011693 5.2e-10 68.9 131 28.2
CARHR118560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 6.8e-10 68.6 107 40.2
AL5G19630 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.9e-10 68.2 141 27.0
A06p24280 Brassica napus HOM05D008596 ORTHO05D003268 8.9e-10 68.2 151 28.5
A06p25180 Brassica napus HOM05D008596 ORTHO05D003268 8.9e-10 68.2 151 28.5
AT2G15420 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 2.6e-09 66.6 127 23.6
AT3G43148 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 2.6e-09 66.6 106 34.9
BcaC03g15125 Brassica carinata HOM05D006121 ORTHO05D009559 2.6e-09 66.6 55 58.2
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 4.4e-09 65.9 165 25.5
A03p68840 Brassica napus HOM05D008596 ORTHO05D003268 4.4e-09 65.9 164 25.6
BraSC39t46179Z Brassica rapa HOM05D008596 ORTHO05D003268 4.4e-09 65.9 164 25.6
BolC3t19358H Brassica oleracea HOM05D003421 ORTHO05D003268 5.7e-09 65.5 126 29.4
CARHR174650 Cardamine hirsuta HOM05D008458 ORTHO05D010628 5.7e-09 65.5 136 27.2
BolC3t19281H Brassica oleracea HOM05D003421 ORTHO05D003268 7.5e-09 65.1 149 24.2
BolC9t56748H Brassica oleracea HOM05D003421 ORTHO05D003268 7.5e-09 65.1 182 26.4
Sp4g11160 Schrenkiella parvula HOM05D010772 ORTHO05D005680 9.8e-09 64.7 137 23.4
BraA01t02722Z Brassica rapa HOM05D003421 ORTHO05D003268 1.3e-08 64.3 183 22.4
BolC9t58013H Brassica oleracea HOM05D006121 ORTHO05D009559 1.7e-08 63.9 111 34.2
BraA06t25464Z Brassica rapa HOM05D008596 ORTHO05D003268 2.2e-08 63.5 144 27.8
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 2.9e-08 63.2 142 25.4
AT2G11010 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.7e-08 62.8 172 23.8
AT4G06688 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.7e-08 62.8 137 32.1
A01p26930 Brassica napus HOM05D008596 ORTHO05D003268 3.7e-08 62.8 158 24.7
BolC2t10336H Brassica oleracea HOM05D003421 ORTHO05D003268 6.4e-08 62.0 140 26.4
BolC4t24275H Brassica oleracea HOM05D007986 ORTHO05D003268 8.3e-08 61.6 143 26.6
AT1G36100 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.4e-07 60.8 96 33.3
BolC2t10401H Brassica oleracea HOM05D007986 ORTHO05D003268 1.8e-07 60.5 136 29.4
Carub.0003s2886 Capsella rubella HOM05D016834 ORTHO05D016863 1.8e-07 60.5 203 22.7
Carub.0004s1088 Capsella rubella HOM05D010629 ORTHO05D005680 1.8e-07 60.5 147 21.8
Carub.0007s3091 Capsella rubella HOM05D016834 ORTHO05D016863 1.8e-07 60.5 203 23.2
Carub.0003s2394 Capsella rubella HOM05D016834 ORTHO05D016863 2.4e-07 60.1 203 22.7
Carub.0004s1788 Capsella rubella HOM05D009492 ORTHO05D011693 3.2e-07 59.7 173 22.5
Sp6g07550 Schrenkiella parvula HOM05D010772 ORTHO05D005680 3.2e-07 59.7 103 26.2
Carub.0072s0001 Capsella rubella HOM05D010629 ORTHO05D005680 4.1e-07 59.3 141 22.7
BolC9t56870H Brassica oleracea HOM05D003421 ORTHO05D003268 5.4e-07 58.9 165 23.0
AT3G42060 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 7.0e-07 58.5 129 25.6
Carub.0014s0006 Capsella rubella HOM05D009492 ORTHO05D011693 7.0e-07 58.5 155 22.6
A01p26540 Brassica napus HOM05D003421 ORTHO05D003268 9.2e-07 58.2 142 25.4
A05p19660 Brassica napus HOM05D008596 ORTHO05D003268 9.2e-07 58.2 131 26.0
Carub.0008s1221 Capsella rubella HOM05D016834 ORTHO05D016863 1.2e-06 57.8 166 24.1
CARHR119450 Cardamine hirsuta HOM05D006121 ORTHO05D043487 1.2e-06 57.8 84 34.5
Carub.0108s0001 Capsella rubella HOM05D016834 ORTHO05D016863 1.6e-06 57.4 166 23.5
BolC4t25137H Brassica oleracea HOM05D003421 ORTHO05D003268 4.6e-06 55.8 136 27.2
BolC5t31483H Brassica oleracea HOM05D028664 ORTHO05D032055 5.9e-06 55.5 86 31.4
Carub.0005s0837 Capsella rubella HOM05D010629 ORTHO05D005680 5.9e-06 55.5 152 23.7
Carub.0006s2612 Capsella rubella HOM05D016834 ORTHO05D016863 5.9e-06 55.5 167 23.4


User provided reference genes

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