Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-115 419.1 203 100.0
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 3.4e-91 338.6 201 84.1
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 3.5e-88 328.6 202 81.2
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 6.8e-84 314.3 202 78.7
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-72 276.2 202 65.3
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 4.6e-72 275.0 202 63.4
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 6.2e-69 264.6 202 61.4
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 8.9e-68 260.8 202 61.4
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-66 256.9 202 61.4
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 6.0e-64 248.1 202 59.4
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 6.6e-63 244.6 202 58.9
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-58 230.3 202 56.4
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 6.2e-53 211.5 202 55.0
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-49 198.7 177 55.9
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-45 187.2 201 48.8
BcaC03g16486 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-45 187.2 177 53.7
BcaC05g28043 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-44 183.7 177 53.1
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 9.0e-44 181.0 189 47.6
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-39 167.5 201 44.8
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 3.0e-39 166.0 183 45.9
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 5.1e-39 165.2 192 43.8
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 3.3e-38 162.5 179 48.0
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 7.4e-38 161.4 203 46.8
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-36 157.5 201 44.8
BcaC04g20823 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-36 156.4 147 53.7
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 3.4e-35 152.5 202 44.6
BcaC02g09767 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-34 150.6 130 56.2
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-34 150.6 147 49.0
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 1.3e-34 150.6 192 39.6
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-33 146.7 104 63.5
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 2.5e-33 146.4 104 63.5
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 5.5e-33 145.2 156 47.4
BcaC07g37265 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-32 143.7 109 65.1
BcaC03g15126 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-32 143.3 145 51.7
BcaC06g35841 Brassica carinata HOM05D006121 ORTHO05D009559 3.5e-32 142.5 109 62.4
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 6.0e-32 141.7 202 42.1
BcaC08g42838 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-29 133.7 91 63.7
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-27 127.1 148 45.9
BolC7t41498H Brassica oleracea HOM05D006121 ORTHO05D009559 3.4e-27 125.9 166 40.4
BcaC01g00176 Brassica carinata HOM05D006121 ORTHO05D009559 7.6e-27 124.8 89 62.9
BcaC03g15823 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-26 123.6 115 52.2
BraA06t25079Z Brassica rapa HOM05D006121 ORTHO05D009559 2.9e-26 122.9 121 46.3
BcaC09g50206 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-26 122.5 115 53.0
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 8.4e-26 121.3 149 40.9
BcaC02g10718 Brassica carinata HOM05D006121 ORTHO05D009559 3.2e-25 119.4 93 61.3
BcaC04g20594 Brassica carinata HOM05D006121 ORTHO05D009559 5.5e-25 118.6 201 39.8
BolC9t56759H Brassica oleracea HOM05D006121 ORTHO05D009559 6.7e-23 111.7 101 53.5
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 6.3e-21 105.1 123 44.7
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 3.1e-20 102.8 147 32.0
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.1e-20 102.4 149 36.2
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.9e-20 101.7 130 37.7
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 9.0e-20 101.3 130 37.7
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.5e-19 100.5 130 36.9
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.4e-19 99.4 149 35.6
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.4e-19 99.4 149 35.6
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.4e-19 99.4 130 37.7
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.4e-19 99.4 130 37.7
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.5e-19 99.0 130 37.7
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.9e-19 98.6 130 37.7
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.9e-19 98.6 130 37.7
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.9e-19 98.6 126 38.1
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.0e-18 97.8 130 36.9
BcaC04g22048 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-18 97.8 81 60.5
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-18 97.4 149 34.9
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-18 97.1 130 36.9
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-18 97.1 130 36.2
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-18 97.1 130 36.2
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.2e-18 96.7 130 36.2
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 2.2e-18 96.7 132 37.1
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 2.2e-18 96.7 169 30.2
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 3.8e-18 95.9 136 34.6
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.8e-18 95.9 130 36.9
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.5e-18 95.1 140 37.9
C05p29190 Brassica napus HOM05D006121 ORTHO05D009559 1.1e-17 94.4 72 58.3
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.4e-17 94.0 122 32.8
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 2.5e-17 93.2 137 35.0
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 3.2e-17 92.8 122 35.2
BcaC08g43697 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-17 92.4 73 60.3
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 4.2e-17 92.4 123 36.6
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 2.1e-16 90.1 123 36.6
BcaC03g16668 Brassica carinata HOM05D006121 ORTHO05D009559 4.6e-16 89.0 60 63.3
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 4.6e-16 89.0 126 35.7
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 2.3e-15 86.7 138 31.9
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.0e-15 86.3 137 33.6
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.4e-14 81.6 140 37.1
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 7.4e-14 81.6 116 34.5
BolC3t19110H Brassica oleracea HOM05D006121 ORTHO05D043263 3.7e-13 79.3 48 79.2
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-12 77.4 123 30.9
BcaC03g16745 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-12 77.0 63 57.1
BcaC09g51377 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-12 76.6 97 45.4
Carub.0003s2830 Capsella rubella HOM05D009492 ORTHO05D011693 1.5e-11 73.9 153 28.1
AT1G46696 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 2.0e-11 73.6 148 27.0
BolC4t24012H Brassica oleracea HOM05D006121 ORTHO05D009559 7.7e-11 71.6 69 52.2
Carub.0004s0672 Capsella rubella HOM05D009492 ORTHO05D011693 2.9e-10 69.7 136 27.9
Sp7g05200 Schrenkiella parvula HOM05D002078 ORTHO05D005680 2.9e-10 69.7 165 27.9
Carub.0002s1048 Capsella rubella HOM05D009492 ORTHO05D011693 3.8e-10 69.3 129 29.5
CARHR035710 Cardamine hirsuta HOM05D008458 ORTHO05D010628 5.0e-10 68.9 158 30.4
BraA05t20949Z Brassica rapa HOM05D006121 ORTHO05D009559 1.4e-09 67.4 88 43.2
Carub.0006s2663 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-09 67.4 87 35.6
Carub.0007s3212 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-09 67.4 123 29.3
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 4.2e-09 65.9 132 29.5
AL3G43600 Arabidopsis lyrata HOM05D010629 ORTHO05D005680 1.6e-08 63.9 131 26.7
BolC2t09439H Brassica oleracea HOM05D003421 ORTHO05D003268 2.1e-08 63.5 145 25.5
BcaC08g43032 Brassica carinata HOM05D006121 ORTHO05D009559 2.7e-08 63.2 47 61.7
A08p08190 Brassica napus HOM05D008596 ORTHO05D003268 2.7e-08 63.2 174 27.0
AL5G19630 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.6e-08 62.8 98 32.7
CARHR105800 Cardamine hirsuta HOM05D008458 ORTHO05D010628 4.7e-08 62.4 107 34.6
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 1.4e-07 60.8 147 24.5
Carub.0008s0719 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-07 60.8 116 27.6
AT2G15420 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 2.3e-07 60.1 127 22.8
BcaC04g22047 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-07 60.1 47 59.6
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 3.0e-07 59.7 57 43.9
Carub.0014s0006 Capsella rubella HOM05D009492 ORTHO05D011693 3.9e-07 59.3 178 21.9
Sp6g07550 Schrenkiella parvula HOM05D010772 ORTHO05D005680 3.9e-07 59.3 103 27.2
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 6.7e-07 58.5 118 28.0
BolC9t58013H Brassica oleracea HOM05D006121 ORTHO05D009559 6.7e-07 58.5 111 31.5
AL8G10170 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.1e-06 57.8 130 26.2
BolC4t23765H Brassica oleracea HOM05D003421 ORTHO05D003268 2.6e-06 56.6 106 28.3
A03p66670 Brassica napus HOM05D008596 ORTHO05D003268 3.3e-06 56.2 113 27.4
A03p68840 Brassica napus HOM05D008596 ORTHO05D003268 4.4e-06 55.8 146 25.3
A05p23070 Brassica napus HOM05D008596 ORTHO05D003268 4.4e-06 55.8 139 27.3
BraA06t25464Z Brassica rapa HOM05D008596 ORTHO05D003268 4.4e-06 55.8 140 25.0
BraSC39t46179Z Brassica rapa HOM05D008596 ORTHO05D003268 4.4e-06 55.8 146 25.3
CARHR118560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 4.4e-06 55.8 101 36.6
CARHR174650 Cardamine hirsuta HOM05D008458 ORTHO05D010628 4.4e-06 55.8 86 32.6
A06p24280 Brassica napus HOM05D008596 ORTHO05D003268 7.4e-06 55.1 139 27.3
A06p25180 Brassica napus HOM05D008596 ORTHO05D003268 7.4e-06 55.1 139 27.3
A01p26930 Brassica napus HOM05D008596 ORTHO05D003268 9.7e-06 54.7 158 24.1


User provided reference genes

Program Settings