Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49679 Brassica carinata HOM05D004760 ORTHO05D006114 8.3e-70 266.9 136 100.0
C01p34030 Brassica napus HOM05D004760 ORTHO05D006114 1.2e-68 263.1 136 98.5
BolC1t03372H Brassica oleracea HOM05D004760 ORTHO05D006114 1.2e-68 263.1 136 98.5
A06p21630 Brassica napus HOM05D004760 ORTHO05D006114 7.8e-60 233.8 136 88.2
BraA06t25253Z Brassica rapa HOM05D004760 ORTHO05D006114 7.8e-60 233.8 136 88.2
Thhalv10002715m.g Eutrema salsugineum HOM05D004760 ORTHO05D006114 2.3e-59 232.3 136 87.5
Sp5g16240 Schrenkiella parvula HOM05D004760 ORTHO05D006114 3.0e-59 231.9 136 86.8
BcaC01g02002 Brassica carinata HOM05D004760 ORTHO05D006114 3.9e-59 231.5 136 86.8
C03p69650 Brassica napus HOM05D004760 ORTHO05D006114 3.9e-59 231.5 136 86.8
BolC3t19223H Brassica oleracea HOM05D004760 ORTHO05D006114 3.9e-59 231.5 136 86.8
BcaB01g01128 Brassica carinata HOM05D004760 ORTHO05D006114 1.1e-58 229.9 136 86.0
CARHR150950 Cardamine hirsuta HOM05D004760 ORTHO05D006114 4.7e-57 224.6 136 86.0
AT3G45020 Arabidopsis thaliana HOM05D004760 ORTHO05D006114 1.7e-54 216.1 136 83.8
AL5G23480 Arabidopsis lyrata HOM05D004760 ORTHO05D006114 2.2e-54 215.7 136 83.1
Carub.0005s1081 Capsella rubella HOM05D004760 ORTHO05D006114 3.2e-53 211.8 136 82.4
Aa31LG4G14120 Aethionema arabicum HOM05D004760 ORTHO05D006114 5.1e-51 204.5 128 82.8
THA.LOC104810873 Tarenaya hassleriana HOM05D004760 ORTHO05D006114 2.1e-49 199.1 127 78.7
BcaB05g23055 Brassica carinata HOM05D004760 ORTHO05D006114 1.2e-47 193.4 134 78.4
CsaV3_4G002110 Cucumis sativus L. HOM05D004760 ORTHO05D006114 1.2e-47 193.4 123 76.4
MELO3C033128.2 Cucumis melo HOM05D004760 ORTHO05D006114 1.5e-47 193.0 123 76.4
Atru.chr10.822 Acer truncatum HOM05D004760 ORTHO05D006114 7.6e-47 190.7 117 76.9
QL01p015831 Quercus lobata HOM05D004760 ORTHO05D006114 7.6e-47 190.7 127 74.0
Atru.chr10.811 Acer truncatum HOM05D004760 ORTHO05D006114 9.9e-47 190.3 119 75.6
Cfa010341 Carpinus fangiana HOM05D004760 ORTHO05D006114 1.3e-46 189.9 117 77.8
Cpa.g.sc94.2 Carica papaya HOM05D004760 ORTHO05D006114 2.2e-46 189.1 132 71.2
ClCG02G021440 Citrullus lanatus HOM05D004760 ORTHO05D006114 2.2e-46 189.1 129 70.5
A01p26650 Brassica napus HOM05D004760 ORTHO05D006114 2.9e-46 188.7 136 77.2
BraA01t02596Z Brassica rapa HOM05D004760 ORTHO05D006114 2.9e-46 188.7 136 77.2
GSVIVG01031504001 Vitis vinifera HOM05D004760 ORTHO05D006114 2.9e-46 188.7 127 70.9
Haze_23747 Corylus avellana HOM05D004760 ORTHO05D006114 3.8e-46 188.3 117 76.9
TWI79G1159 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 3.8e-46 188.3 121 73.6
Ciclev10002842m.g Citrus clementina HOM05D004760 ORTHO05D006114 4.9e-46 188.0 117 75.2
COL.COLO4_03696 Corchorus olitorius HOM05D004760 ORTHO05D006114 4.9e-46 188.0 117 76.9
Thecc.09G348500 Theobroma cacao HOM05D004760 ORTHO05D006114 4.9e-46 188.0 117 76.1
Dinv29358 Davidia involucrata HOM05D004760 ORTHO05D006114 6.4e-46 187.6 117 76.1
CANSAT80G1575 Cannabis sativa HOM05D004760 ORTHO05D006114 8.4e-46 187.2 117 74.4
Gohir.A03G030600 Gossypium hirsutum HOM05D004760 ORTHO05D006114 8.4e-46 187.2 117 75.2
Rhsim01G0212000 Rhododendron simsii HOM05D004760 ORTHO05D006114 8.4e-46 187.2 117 75.2
Gohir.D03G137800 Gossypium hirsutum HOM05D004760 ORTHO05D006114 1.1e-45 186.8 117 75.2
Gorai.003G144700 Gossypium raimondii HOM05D004760 ORTHO05D006114 1.1e-45 186.8 117 75.2
CSS0038756 Camellia sinensis var. sinensis HOM05D004760 ORTHO05D006114 1.4e-45 186.4 117 76.9
ECA233G3649 Erigeron canadensis HOM05D004760 ORTHO05D006114 1.4e-45 186.4 119 75.6
Aqoxy1G01159 Aquilegia oxysepala HOM05D004760 ORTHO05D006114 1.9e-45 186.0 117 76.9
CiPaw.14G087800 Carya illinoinensis HOM05D004760 ORTHO05D006114 1.9e-45 186.0 117 74.4
Lsat_1_v5_gn_2_99521 Lactuca sativa HOM05D004760 ORTHO05D006114 1.9e-45 186.0 119 75.6
Duzib150G1663 Durio zibethinus HOM05D004760 ORTHO05D006114 2.4e-45 185.7 117 76.1
TAR636G2244 Trochodendron aralioides HOM05D004760 ORTHO05D006114 4.2e-45 184.9 117 75.2
vmacro14407 Vaccinium macrocarpon HOM05D004760 ORTHO05D006114 4.2e-45 184.9 117 74.4
MSTRG.22442 Avicennia marina HOM05D004760 ORTHO05D006114 9.3e-45 183.7 117 74.4
CAN.G546.10 Capsicum annuum HOM05D004760 ORTHO05D006114 9.3e-45 183.7 124 71.8
Migut.D02262 Erythranthe guttata HOM05D004760 ORTHO05D006114 9.3e-45 183.7 133 66.2
Lj1C207G1 Lonicera japonica HOM05D000681 ORTHO05D003832 1.6e-44 183.0 124 73.4
Manes.15G173300 Manihot esculenta HOM05D004760 ORTHO05D006114 1.6e-44 183.0 117 71.8
Sopen11g027800 Solanum pennellii HOM05D004760 ORTHO05D006114 2.1e-44 182.6 117 75.2
PGSC0003DMG400008071 Solanum tuberosum HOM05D004760 ORTHO05D006114 2.1e-44 182.6 117 75.2
Manes.04G015300 Manihot esculenta HOM05D004760 ORTHO05D006114 4.6e-44 181.4 117 71.8
Potri.004G214400 Populus trichocarpa HOM05D004760 ORTHO05D006114 4.6e-44 181.4 124 66.9
Lj3g0014185 Lotus japonicus HOM05D004760 ORTHO05D006114 6.0e-44 181.0 117 72.6
SalBow3G2862 Salvia bowleyana HOM05D004760 ORTHO05D006114 6.0e-44 181.0 128 69.5
PGR083G1146 Punica granatum HOM05D004760 ORTHO05D006114 7.9e-44 180.6 117 76.1
Eucgr.C00623 Eucalyptus grandis HOM05D004760 ORTHO05D006114 1.3e-43 179.9 121 69.4
FAN25G2761 Fragaria x ananassa HOM05D004760 ORTHO05D006114 1.3e-43 179.9 117 71.8
Oeu014013.2 Olea europaea HOM05D004760 ORTHO05D006114 1.3e-43 179.9 129 69.0
PGSC0003DMG400005521 Solanum tuberosum HOM05D004760 ORTHO05D006114 1.3e-43 179.9 117 74.4
FAN11G0015 Fragaria x ananassa HOM05D004760 ORTHO05D006114 1.8e-43 179.5 117 71.8
PGSC0003DMG400008072 Solanum tuberosum HOM05D004760 ORTHO05D006114 1.8e-43 179.5 124 71.0
Oeu013537.1 Olea europaea HOM05D004760 ORTHO05D006114 3.0e-43 178.7 117 72.6
PGSC0003DMG400008118 Solanum tuberosum HOM05D004760 ORTHO05D006114 3.0e-43 178.7 124 70.2
TWI31G0427 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 3.0e-43 178.7 125 68.0
Prupe.6G108700 Prunus persica HOM05D004760 ORTHO05D006114 3.9e-43 178.3 117 70.1
Nitab4.5_0002033g0060 Nicotiana tabacum HOM05D004760 ORTHO05D006114 6.7e-43 177.6 135 64.4
Hund01473 Selenicereus undatus HOM05D004760 ORTHO05D006114 6.7e-43 177.6 121 68.6
Sed0008060 Sechium edule HOM05D004760 ORTHO05D006114 1.9e-42 176.0 132 65.9
Cc01_g10530 Coffea canephora HOM05D004760 ORTHO05D006114 2.5e-42 175.6 117 70.9
MD00G1033500 Malus domestica HOM05D004760 ORTHO05D006114 2.5e-42 175.6 126 67.5
arahy.Tifrunner.gnm1.ann1.TWBW4W Arachis hypogaea HOM05D004760 ORTHO05D006114 3.3e-42 175.3 117 70.9
AUR62034436 Chenopodium quinoa HOM05D004760 ORTHO05D006114 3.3e-42 175.3 119 68.9
Sc06g0010910 Simmondsia chinensis HOM05D004760 ORTHO05D006114 3.3e-42 175.3 117 71.8
arahy.Tifrunner.gnm1.ann1.HQ4852 Arachis hypogaea HOM05D004760 ORTHO05D006114 4.3e-42 174.9 117 70.1
FAN21G0726 Fragaria x ananassa HOM05D004760 ORTHO05D006114 4.3e-42 174.9 117 69.2
DCAR_013702 Daucus carota HOM05D004760 ORTHO05D006114 5.6e-42 174.5 119 71.4
Glyma.03G099400 Glycine max HOM05D004760 ORTHO05D006114 7.4e-42 174.1 124 67.7
Sc06g0010990 Simmondsia chinensis HOM05D004760 ORTHO05D006114 7.4e-42 174.1 117 70.9
arahy.Tifrunner.gnm1.ann1.KI0H1T Arachis hypogaea HOM05D004760 ORTHO05D006114 9.6e-42 173.7 117 70.1
VMungo0331G0086 Vigna mungo HOM05D004760 ORTHO05D006114 9.6e-42 173.7 125 65.6
Sabra04G0145500 Salix brachista HOM05D004760 ORTHO05D006114 1.6e-41 172.9 133 61.7
SGA_v2.0_scaffold263G45970 Striga asiatica HOM05D004760 ORTHO05D006114 3.7e-41 171.8 117 68.4
TPR.G21885 Trifolium pratense HOM05D004760 ORTHO05D006114 4.8e-41 171.4 117 68.4
AUR62014927 Chenopodium quinoa HOM05D004760 ORTHO05D006114 6.2e-41 171.0 115 68.7
unitig_21.g20191 Utricularia gibba HOM05D001235 ORTHO05D005684 6.2e-41 171.0 121 66.9
SHI30132 Sapria himalayana HOM05D004760 ORTHO05D006114 8.1e-41 170.6 121 66.9
Actinidia07172 Actinidia chinensis HOM05D004760 ORTHO05D006114 1.1e-40 170.2 105 76.2
HanXRQChr14g0432111 Helianthus annuus HOM05D004760 ORTHO05D006114 1.1e-40 170.2 107 76.6
Psat3g094560 Pisum sativum HOM05D004760 ORTHO05D006114 1.4e-40 169.9 121 66.9
Lalb_Chr01g0004501 Lupinus albus HOM05D004760 ORTHO05D006114 1.8e-40 169.5 117 68.4
Ca_08122_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 5.3e-40 167.9 117 68.4
PGSC0003DMG400035806 Solanum tuberosum HOM05D004760 ORTHO05D006114 5.3e-40 167.9 124 66.9
arahy.Tifrunner.gnm1.ann1.DTBR3Z Arachis hypogaea HOM05D004760 ORTHO05D006114 6.9e-40 167.5 117 68.4
MBI18_g16202_MAGBIO Magnolia biondii HOM05D004760 ORTHO05D006114 9.0e-40 167.2 124 68.5
Ah.15g090630 Amaranthus hybridus HOM05D004760 ORTHO05D006114 2.6e-39 165.6 121 63.6
Medtr7g083650 Medicago truncatula HOM05D004760 ORTHO05D006114 3.4e-39 165.2 117 68.4
Rhsim13G0099000 Rhododendron simsii HOM05D004760 ORTHO05D006114 2.9e-38 162.2 107 72.0
PGR102G1962 Punica granatum HOM05D004760 ORTHO05D006114 8.4e-38 160.6 117 68.4
FAN16G0053 Fragaria x ananassa HOM05D004760 ORTHO05D006114 1.4e-37 159.8 119 65.5
Haze_20543 Corylus avellana HOM05D004760 ORTHO05D006114 1.9e-37 159.5 116 63.8
Nn7g38254 Nelumbo nucifera HOM05D004760 ORTHO05D006114 2.4e-37 159.1 98 80.6
ECA240G4818 Erigeron canadensis HOM05D007880 ORTHO05D003386 3.2e-37 158.7 99 78.8
Eucgr.B02540 Eucalyptus grandis HOM05D004760 ORTHO05D006114 4.2e-37 158.3 117 64.1
Nitab4.5_0002186g0070 Nicotiana tabacum HOM05D004760 ORTHO05D006114 1.6e-36 156.4 110 70.9
EL10Ac9g22581 Beta vulgaris HOM05D004760 ORTHO05D006114 2.7e-36 155.6 101 70.3
RcHm_v2.0_Chr4g0444611 Rosa chinensis HOM05D004760 ORTHO05D006114 6.0e-36 154.5 115 66.1
HPP92_025344 Vanilla planifolia HOM05D004760 ORTHO05D006114 1.0e-35 153.7 127 62.2
CDE09G0496 Ceratophyllum demersum HOM05D004760 ORTHO05D001676 1.3e-35 153.3 120 64.2
RcHm_v2.0_Chr5g0057731 Rosa chinensis HOM05D004760 ORTHO05D006114 3.9e-35 151.8 98 74.5
ECA238G2603 Erigeron canadensis HOM05D004760 ORTHO05D006114 6.7e-35 151.0 99 73.7
CDE02G4002 Ceratophyllum demersum HOM05D004760 ORTHO05D006114 8.7e-35 150.6 120 63.3
FvH4_3g31090 Fragaria vesca HOM05D004760 ORTHO05D006114 1.5e-34 149.8 98 73.5
Actinidia13489 Actinidia chinensis HOM05D004760 ORTHO05D006114 7.4e-34 147.5 92 71.7
Os09g0549700 Oryza sativa ssp. japonica HOM05D004760 ORTHO05D006114 7.4e-34 147.5 117 64.1
Dinv37316 Davidia involucrata HOM05D004760 ORTHO05D006114 2.4e-32 142.5 95 74.7
arahy.Tifrunner.gnm1.ann1.0NB9P2 Arachis hypogaea HOM05D004760 ORTHO05D006114 5.3e-32 141.4 107 62.6
Zm00001eb320920 Zea mays HOM05D004760 ORTHO05D006114 1.2e-31 140.2 117 59.8
arahy.Tifrunner.gnm1.ann1.JVX2H3 Arachis hypogaea HOM05D004760 ORTHO05D002586 1.9e-29 132.9 100 61.0
Actinidia14009 Actinidia chinensis HOM05D004760 ORTHO05D006114 3.2e-29 132.1 86 72.1
Medtr1g080050 Medicago truncatula HOM05D004760 ORTHO05D006114 4.2e-29 131.7 117 59.0
PSO801G0746 Papaver somniferum HOM05D004760 ORTHO05D006114 5.5e-29 131.3 118 55.9
arahy.Tifrunner.gnm1.ann1.PKX4UH Arachis hypogaea HOM05D004760 ORTHO05D006114 1.2e-28 130.2 96 63.5
Lalb_Chr02g0155851 Lupinus albus HOM05D004760 ORTHO05D006114 3.5e-28 128.6 119 53.8
PSO339G3989 Papaver somniferum HOM05D004760 ORTHO05D006114 3.5e-28 128.6 118 55.1
Hund12449 Selenicereus undatus HOM05D004760 ORTHO05D006114 4.6e-28 128.3 80 72.5
Peaxi162Scf00351g00053 Petunia axillaris HOM05D004760 ORTHO05D006114 5.1e-27 124.8 84 67.9
CsaV3_6G014220 Cucumis sativus L. HOM05D004760 ORTHO05D006114 8.7e-27 124.0 122 54.9
ATR0152G025 Amborella trichopoda HOM05D004760 ORTHO05D006114 3.3e-26 122.1 107 56.1
Ca_06514_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 9.7e-26 120.6 102 59.8
QL11p023169 Quercus lobata HOM05D004760 ORTHO05D006114 1.6e-25 119.8 77 68.8
VMungo0720G1193 Vigna mungo HOM05D004760 ORTHO05D006114 1.8e-24 116.3 112 50.9
DCAR_008992 Daucus carota HOM05D004760 ORTHO05D006114 3.1e-24 115.5 117 47.0
SHI02979 Sapria himalayana HOM05D004760 ORTHO05D006114 3.1e-24 115.5 95 53.7
arahy.Tifrunner.gnm1.ann1.P1K6TB Arachis hypogaea HOM05D004760 ORTHO05D006114 4.1e-24 115.2 84 66.7
TPR.G11257 Trifolium pratense HOM05D004760 ORTHO05D006114 6.9e-24 114.4 111 50.5
SEGI_39147 Sequoiadendron giganteum HOM05D004760 ORTHO05D006114 9.0e-24 114.0 116 54.3
Lj5g0000803 Lotus japonicus HOM05D004760 ORTHO05D006114 3.4e-23 112.1 114 52.6
Medtr1g063230 Medicago truncatula HOM05D004760 ORTHO05D006114 4.5e-23 111.7 113 48.7
Phvul.007G219200 Phaseolus vulgaris HOM05D004760 ORTHO05D006114 4.5e-23 111.7 117 47.9
arahy.Tifrunner.gnm1.ann1.B7429M Arachis hypogaea HOM05D004760 ORTHO05D000042 1.3e-22 110.2 88 62.5
Psat6g074200 Pisum sativum HOM05D004760 ORTHO05D006114 3.8e-22 108.6 113 46.9
Ca_11503_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 5.0e-22 108.2 98 56.1
Glyma.10G055400 Glycine max HOM05D004760 ORTHO05D006114 5.0e-22 108.2 115 49.6
Sc20g0005490 Simmondsia chinensis HOM05D004760 ORTHO05D006114 8.5e-22 107.5 115 48.7
EL10Ac7g16630 Beta vulgaris HOM05D004760 ORTHO05D039006 6.1e-20 101.3 129 43.4
AUR62040351 Chenopodium quinoa HOM05D004760 ORTHO05D039006 6.1e-20 101.3 131 43.5
ECA233G6109 Erigeron canadensis HOM05D000473 ORTHO05D001219 3.0e-19 99.0 61 77.0
MELO3C026909.2 Cucumis melo HOM05D004760 ORTHO05D006114 5.7e-18 94.7 76 65.8
Solyc11g069080.3 Solanum lycopersicum HOM05D004760 ORTHO05D006114 3.8e-14 82.0 53 67.9
Lalb_Chr02g0155971 Lupinus albus HOM05D004760 ORTHO05D006114 1.8e-08 63.2 66 43.9
Nn7g38187 Nelumbo nucifera HOM05D004760 ORTHO05D006114 3.1e-08 62.4 42 71.4
AUR62042505 Chenopodium quinoa HOM05D004760 ORTHO05D138125 1.2e-07 60.5 77 42.9


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