Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 3.7e-129 464.9 241 100.0
BcaC03g17067 Brassica carinata HOM05D000496 ORTHO05D095706 4.6e-79 298.5 232 75.9
BcaC09g48801 Brassica carinata HOM05D000496 ORTHO05D090764 4.3e-45 185.7 164 67.7
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-22 110.2 208 44.7
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 5.2e-22 109.0 230 40.0
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-22 108.2 230 41.7
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 7.4e-21 105.1 135 54.8
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-20 102.1 209 41.6
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-19 101.3 204 41.7
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 4.5e-18 95.9 191 41.9
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 5.9e-18 95.5 227 36.6
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-18 95.5 214 38.8
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-17 94.4 219 37.4
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 1.7e-17 94.0 216 38.4
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-17 93.6 227 38.8
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 2.2e-17 93.6 216 38.4
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 2.9e-17 93.2 233 35.6
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 2.9e-17 93.2 133 51.1
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-17 92.8 202 41.6
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-17 92.4 134 47.8
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-17 92.4 139 48.2
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 6.5e-17 92.0 133 50.4
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 6.5e-17 92.0 140 49.3
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-16 90.9 222 36.5
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 1.2e-15 87.8 201 37.8
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 1.6e-15 87.4 134 44.8
BolC5t33309H Brassica oleracea HOM05D000496 ORTHO05D039269 1.6e-15 87.4 137 46.0
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 2.7e-15 86.7 128 47.7
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 6.1e-15 85.5 134 44.0
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 6.1e-15 85.5 132 46.2
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-15 85.1 228 35.1
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-14 84.7 215 34.0
BcaC01g05229 Brassica carinata HOM05D000496 ORTHO05D039269 1.0e-14 84.7 137 45.3
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 2.3e-14 83.6 134 43.3
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-14 83.2 240 34.6
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 4.0e-14 82.8 228 36.0
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 4.0e-14 82.8 228 36.0
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-14 82.4 238 34.0
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 6.7e-14 82.0 224 34.8
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-13 80.1 144 42.4
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 3.3e-13 79.7 205 34.6
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 9.7e-13 78.2 139 41.7
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-12 77.8 129 40.3
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 2.2e-12 77.0 139 42.4
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-12 76.6 232 32.8
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 2.8e-12 76.6 111 52.3
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 2.8e-12 76.6 138 42.8
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-12 75.9 142 38.0
BolC9t55004H Brassica oleracea HOM05D000496 ORTHO05D014937 4.8e-12 75.9 130 43.1
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 6.3e-12 75.5 230 33.5
A03p66750 Brassica napus HOM05D022631 ORTHO05D024363 8.2e-12 75.1 105 47.6
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-11 74.7 212 34.4
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 1.1e-11 74.7 230 33.5
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-11 73.9 134 42.5
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 1.8e-11 73.9 115 46.1
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-11 73.6 140 38.6
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 2.4e-11 73.6 126 42.9
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 2.4e-11 73.6 120 43.3
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 9.1e-11 71.6 137 40.1
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-10 70.9 221 30.8
C04p23060 Brassica napus HOM05D000496 ORTHO05D019920 1.6e-10 70.9 64 64.1
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 3.5e-10 69.7 129 41.9
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-09 67.0 239 31.8
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 5.0e-09 65.9 239 31.4
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-09 65.5 223 31.4
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-09 65.5 129 38.8
BcaC09g50172 Brassica carinata HOM05D025630 ORTHO05D032542 3.2e-08 63.2 88 47.7
BcaB01g01320 Brassica carinata HOM05D030143 ORTHO05D092293 5.5e-08 62.4 105 44.8
BcaC04g22137 Brassica carinata HOM05D000496 ORTHO05D019920 5.5e-08 62.4 66 60.6
BolC3t20864H Brassica oleracea HOM05D000496 ORTHO05D014937 9.4e-08 61.6 112 41.1
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-07 60.8 212 34.0
BcaC04g23650 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-07 60.5 188 34.6
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 2.1e-07 60.5 231 32.5
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-07 60.1 219 30.1
BolC4t26275H Brassica oleracea HOM05D000496 ORTHO05D039111 2.7e-07 60.1 126 41.3
BcaB06g27458 Brassica carinata HOM05D000496 ORTHO05D039111 3.6e-07 59.7 126 41.3
BolC2t08173H Brassica oleracea HOM05D022631 ORTHO05D024363 3.6e-07 59.7 97 50.5
BolC9t55084H Brassica oleracea HOM05D020706 ORTHO05D032392 3.6e-07 59.7 134 35.1
BcaNung03853 Brassica carinata HOM05D000496 ORTHO05D039941 4.7e-07 59.3 87 44.8
C02p20400 Brassica napus HOM05D022631 ORTHO05D024363 1.0e-06 58.2 97 49.5
BcaC05g25070 Brassica carinata HOM05D030143 ORTHO05D039637 1.4e-06 57.8 70 50.0
BraA01t02806Z Brassica rapa HOM05D022631 ORTHO05D024363 1.4e-06 57.8 106 45.3
BcaC06g33823 Brassica carinata HOM05D000496 ORTHO05D031880 1.8e-06 57.4 231 32.0
C08p18460 Brassica napus HOM05D000496 ORTHO05D042898 4.0e-06 56.2 174 32.8
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 6.8e-06 55.5 231 31.6
BcaC09g49773 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-06 55.1 229 31.0


User provided reference genes

Program Settings