Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49648 Brassica carinata HOM05D008686 ORTHO05D010632 7.9e-308 1059.7 562 100.0
BcaC08g44776 Brassica carinata HOM05D008686 ORTHO05D010632 5.6e-237 824.3 583 77.7
BcaB06g27296 Brassica carinata HOM05D008686 ORTHO05D010632 1.9e-200 703.0 582 67.7
BcaC06g36452 Brassica carinata HOM05D008686 ORTHO05D010632 7.2e-184 647.9 526 68.3
BcaC04g22807 Brassica carinata HOM05D008686 ORTHO05D010632 2.1e-175 619.8 562 63.9
BcaC03g18045 Brassica carinata HOM05D008686 ORTHO05D010632 3.0e-145 519.6 465 63.7
Sp7g05610 Schrenkiella parvula HOM05D008686 ORTHO05D010632 2.5e-51 207.6 518 32.2
CARHR114920 Cardamine hirsuta HOM05D008686 ORTHO05D010632 4.7e-50 203.4 287 41.1
Sp2g05560 Schrenkiella parvula HOM05D008686 ORTHO05D010632 5.7e-48 196.4 222 45.0
SpUn0001_0450 Schrenkiella parvula HOM05D008686 ORTHO05D010632 1.1e-43 182.2 365 36.2
Sp1g34790 Schrenkiella parvula HOM05D008686 ORTHO05D010632 3.6e-42 177.2 283 38.5
Sp7g07950 Schrenkiella parvula HOM05D008686 ORTHO05D010632 3.4e-40 170.6 502 30.5
BcaC07g37453 Brassica carinata HOM05D008686 ORTHO05D010632 4.4e-40 170.2 345 35.1
Carub.0008s1611 Capsella rubella HOM05D008686 ORTHO05D010632 1.0e-36 159.1 392 32.4
BcaB03g16491 Brassica carinata HOM05D008686 ORTHO05D010632 2.3e-36 157.9 225 46.7
Carub.0004s0690 Capsella rubella HOM05D008686 ORTHO05D010632 5.0e-36 156.8 400 31.0
Carub.0001s3313 Capsella rubella HOM05D008686 ORTHO05D010632 8.0e-34 149.4 415 31.1
Sp1g30550 Schrenkiella parvula HOM05D008686 ORTHO05D010632 1.2e-32 145.6 170 42.9
Carub.0005s2790 Capsella rubella HOM05D008686 ORTHO05D010632 1.5e-32 145.2 397 31.2
BolC3t16607H Brassica oleracea HOM05D008686 ORTHO05D010632 2.6e-32 144.4 315 35.2
BcaC01g04259 Brassica carinata HOM05D008686 ORTHO05D010632 2.2e-31 141.4 266 35.3
BcaB02g10761 Brassica carinata HOM05D008686 ORTHO05D010632 1.8e-30 138.3 269 37.5
BcaB08g35901 Brassica carinata HOM05D008686 ORTHO05D010632 3.9e-28 130.6 438 29.2
BcaC04g18968 Brassica carinata HOM05D008686 ORTHO05D010632 1.5e-27 128.6 94 76.6
BcaB06g27081 Brassica carinata HOM05D008686 ORTHO05D010632 1.3e-23 115.5 198 42.9
BcaC04g18666 Brassica carinata HOM05D008686 ORTHO05D010632 1.9e-22 111.7 93 68.8
BcaC09g50702 Brassica carinata HOM05D008686 ORTHO05D010632 1.9e-22 111.7 274 32.5
BcaC03g15446 Brassica carinata HOM05D008686 ORTHO05D010632 8.6e-20 102.8 184 35.3
BcaC08g42959 Brassica carinata HOM05D008686 ORTHO05D010632 2.5e-19 101.3 83 68.7
BcaB04g17116 Brassica carinata HOM05D008686 ORTHO05D010632 9.5e-19 99.4 191 40.8
BcaB03g16492 Brassica carinata HOM05D008686 ORTHO05D010632 1.2e-18 99.0 304 30.9
Sp7g03840 Schrenkiella parvula HOM05D016270 ORTHO05D019360 2.0e-16 91.7 210 27.6
BcaC08g43572 Brassica carinata HOM05D008686 ORTHO05D010632 2.6e-16 91.3 301 26.6
BcaC08g45173 Brassica carinata HOM05D008686 ORTHO05D010632 2.2e-15 88.2 456 24.3
Carub.0008s2399 Capsella rubella HOM05D007011 ORTHO05D008837 4.1e-14 84.0 272 27.2
Carub.0002s0999 Capsella rubella HOM05D018391 ORTHO05D020270 1.2e-13 82.4 301 28.2
Carub.0033s0001 Capsella rubella HOM05D007011 ORTHO05D008837 1.2e-13 82.4 318 27.0
Carub.0003s2810 Capsella rubella HOM05D018391 ORTHO05D020270 2.1e-13 81.6 403 25.6
Sp2g06580 Schrenkiella parvula HOM05D016270 ORTHO05D019360 6.0e-13 80.1 177 29.9
Carub.0211s0001 Capsella rubella HOM05D018391 ORTHO05D020270 1.0e-12 79.3 422 25.8
Sp2g07730 Schrenkiella parvula HOM05D016270 ORTHO05D019360 1.0e-12 79.3 272 25.0
Carub.0001s2793 Capsella rubella HOM05D018391 ORTHO05D020270 8.6e-12 76.3 391 26.1
Carub.0005s1694 Capsella rubella HOM05D018391 ORTHO05D020270 1.1e-11 75.9 366 26.0
BcaC09g52221 Brassica carinata HOM05D005703 ORTHO05D006643 1.5e-11 75.5 84 52.4
THA.LOC104808349 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 1.9e-11 75.1 257 28.0
BcaB02g11464 Brassica carinata HOM05D007986 ORTHO05D003268 3.3e-11 74.3 61 65.6
BcaB08g36053 Brassica carinata HOM05D008686 ORTHO05D010632 4.3e-11 73.9 99 48.5
THA.LOC104821895 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 5.6e-11 73.6 250 29.6
THA.LOC104805003 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 7.3e-11 73.2 227 30.8
THA.LOC104807979 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 7.3e-11 73.2 246 28.5
Carub.0004s0578 Capsella rubella HOM05D018391 ORTHO05D020270 9.5e-11 72.8 391 25.8
BcaB01g02673 Brassica carinata HOM05D000315 ORTHO05D000527 2.1e-10 71.6 114 39.5
THA.LOC104825583 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 2.8e-10 71.2 246 28.0
THA.LOC104810607 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 4.7e-10 70.5 246 28.0
Medtr6g053160 Medicago truncatula HOM05D003454 ORTHO05D004637 5.2e-09 67.0 180 26.7
THA.LOC104822876 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 8.9e-09 66.2 205 28.8
BcaC07g37533 Brassica carinata HOM05D007011 ORTHO05D008837 2.0e-08 65.1 151 29.1
BcaC02g09682 Brassica carinata HOM05D008686 ORTHO05D010632 2.6e-08 64.7 243 24.3
Carub.0003s2700 Capsella rubella HOM05D018391 ORTHO05D020270 4.4e-08 63.9 382 25.4
SpUn0037_0030 Schrenkiella parvula HOM05D021344 ORTHO05D010632 5.8e-08 63.5 104 36.5
BcaC02g07935 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-07 62.4 184 26.6
SpUn0097_0010 Schrenkiella parvula HOM05D021344 ORTHO05D010632 2.2e-07 61.6 104 34.6
THA.LOC104822798 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 2.9e-07 61.2 450 23.8
BcaC03g17624 Brassica carinata HOM05D007011 ORTHO05D008837 6.4e-07 60.1 202 25.2
Sp4g10290 Schrenkiella parvula HOM05D016270 ORTHO05D019360 8.4e-07 59.7 85 28.2
BcaC01g01763 Brassica carinata HOM05D007011 ORTHO05D008837 1.4e-06 58.9 180 24.4
MELO3C030164.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.4e-06 58.2 154 30.5
CsaV3_4G030450 Cucumis sativus L. HOM05D003454 ORTHO05D004637 2.4e-06 58.2 180 25.6
C07p51970 Brassica napus HOM05D007011 ORTHO05D008837 5.4e-06 57.0 123 29.3


User provided reference genes

Program Settings