Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49615 Brassica carinata HOM05D012153 ORTHO05D016051 1.4e-41 172.6 86 100.0
BolC1t03417H Brassica oleracea HOM05D012153 ORTHO05D016051 5.1e-41 170.6 86 98.8
BcaC03g16314 Brassica carinata HOM05D012153 ORTHO05D016051 3.7e-39 164.5 86 94.2
BraA01t02843Z Brassica rapa HOM05D012153 ORTHO05D016051 3.7e-39 164.5 86 95.3
BcaC05g27561 Brassica carinata HOM05D012153 ORTHO05D016051 2.0e-37 158.7 86 91.9
C01p34490 Brassica napus HOM05D012153 ORTHO05D016051 3.0e-17 91.7 45 93.3
A01p27090 Brassica napus HOM05D012153 ORTHO05D016051 2.2e-15 85.5 45 86.7
C05p35450 Brassica napus HOM05D012153 ORTHO05D016051 4.8e-15 84.3 45 84.4
BolC5t32257H Brassica oleracea HOM05D012153 ORTHO05D016051 6.3e-15 84.0 45 84.4
BcaNung05559 Brassica carinata HOM05D012153 ORTHO05D016051 1.2e-13 79.7 40 90.0
A08p36150 Brassica napus HOM05D000305 ORTHO05D000065 1.2e-08 63.2 53 49.1
C04p22130 Brassica napus HOM05D000305 ORTHO05D000065 1.2e-08 63.2 53 49.1
C08p32270 Brassica napus HOM05D000305 ORTHO05D000065 1.2e-08 63.2 53 49.1
C09p26930 Brassica napus HOM05D000305 ORTHO05D000065 1.2e-08 63.2 53 49.1
BolC2t10149H Brassica oleracea HOM05D063597 ORTHO05D041577 4.4e-08 61.2 43 72.1
BcaC02g10044 Brassica carinata HOM05D000305 ORTHO05D000065 8.3e-07 57.0 53 45.3
C01p45260 Brassica napus HOM05D021248 ORTHO05D018618 1.8e-06 55.8 66 42.4
BcaB08g36160 Brassica carinata HOM05D012153 ORTHO05D091101 2.4e-06 55.5 57 49.1
BcaB06g28038 Brassica carinata HOM05D000305 ORTHO05D017497 3.1e-06 55.1 45 51.1
BcaC09g48847 Brassica carinata HOM05D021248 ORTHO05D018618 3.1e-06 55.1 54 46.3
BcaNung06141 Brassica carinata HOM05D000305 ORTHO05D018618 3.1e-06 55.1 50 48.0
A04p16430 Brassica napus HOM05D000305 ORTHO05D000065 3.1e-06 55.1 52 44.2
A07p14010 Brassica napus HOM05D000305 ORTHO05D000065 3.1e-06 55.1 45 51.1
BraA01t01928Z Brassica rapa HOM05D000305 ORTHO05D000065 3.1e-06 55.1 45 51.1
BraA10t43656Z Brassica rapa HOM05D000305 ORTHO05D000065 3.1e-06 55.1 45 51.1
BcaB06g27117 Brassica carinata HOM05D000305 ORTHO05D000065 4.1e-06 54.7 55 45.5
A02p11560 Brassica napus HOM05D012153 ORTHO05D017497 4.1e-06 54.7 51 45.1
A08p30930 Brassica napus HOM05D012153 ORTHO05D017497 4.1e-06 54.7 51 45.1
BraA06t24521Z Brassica rapa HOM05D021248 ORTHO05D018618 4.1e-06 54.7 54 44.4
BcaB06g26158 Brassica carinata HOM05D000305 ORTHO05D000065 5.4e-06 54.3 54 46.3
BraA01t00626Z Brassica rapa HOM05D000305 ORTHO05D000065 5.4e-06 54.3 52 44.2
C03p85270 Brassica napus HOM05D000305 ORTHO05D000065 9.2e-06 53.5 52 46.2
C05p45350 Brassica napus HOM05D000305 ORTHO05D000065 9.2e-06 53.5 52 46.2
C05p54450 Brassica napus HOM05D021248 ORTHO05D018618 9.2e-06 53.5 54 44.4


User provided reference genes

Program Settings