Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49519 Brassica carinata HOM05D003591 ORTHO05D005681 5.7e-68 260.8 130 100.0
BolC5t33482H Brassica oleracea HOM05D003591 ORTHO05D005681 6.6e-48 194.1 108 92.6
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 4.3e-47 191.4 105 93.3
BcaC02g09149 Brassica carinata HOM05D003591 ORTHO05D005681 5.6e-47 191.0 105 93.3
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 5.6e-47 191.0 105 93.3
C02p09960 Brassica napus HOM05D003591 ORTHO05D005681 7.3e-47 190.7 105 93.3
BcaC06g34164 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-46 189.5 105 92.4
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-46 189.5 105 92.4
C02p51040 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-46 189.5 105 92.4
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-46 189.5 105 92.4
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-46 189.5 105 92.4
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-46 189.5 105 92.4
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-46 189.5 105 92.4
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 1.6e-46 189.5 105 92.4
BolC5t32233H Brassica oleracea HOM05D003591 ORTHO05D005681 2.1e-46 189.1 106 91.5
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 4.7e-46 188.0 105 91.4
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 6.1e-46 187.6 105 91.4
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 6.1e-46 187.6 105 91.4
BolC4t27380H Brassica oleracea HOM05D003591 ORTHO05D005681 6.1e-46 187.6 106 91.5
BcaC02g11382 Brassica carinata HOM05D003591 ORTHO05D005681 8.0e-46 187.2 105 91.4
BcaC04g20349 Brassica carinata HOM05D003591 ORTHO05D005681 8.0e-46 187.2 105 91.4
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 8.0e-46 187.2 105 91.4
BcaC02g10879 Brassica carinata HOM05D003591 ORTHO05D092259 1.4e-45 186.4 105 90.5
C01p09530 Brassica napus HOM05D003591 ORTHO05D005681 1.4e-45 186.4 105 90.5
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 1.4e-45 186.4 105 91.4
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 1.4e-45 186.4 105 90.5
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 2.3e-45 185.7 105 90.5
C08p14230 Brassica napus HOM05D003591 ORTHO05D005681 2.3e-45 185.7 105 89.5
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 2.3e-45 185.7 105 90.5
BcaC03g15229 Brassica carinata HOM05D003591 ORTHO05D003049 4.0e-45 184.9 105 90.5
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 4.0e-45 184.9 105 90.5
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 4.0e-45 184.9 105 90.5
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-45 184.5 105 88.6
BolC5t32448H Brassica oleracea HOM05D003591 ORTHO05D005681 5.2e-45 184.5 105 89.5
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 6.8e-45 184.1 105 89.5
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 6.8e-45 184.1 105 89.5
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 6.8e-45 184.1 105 88.6
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 6.8e-45 184.1 105 89.5
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 1.2e-44 183.3 105 89.5
C04p28010 Brassica napus HOM05D003591 ORTHO05D005681 2.0e-44 182.6 105 90.5
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 2.0e-44 182.6 105 89.5
BolC4t24345H Brassica oleracea HOM05D003591 ORTHO05D005681 2.0e-44 182.6 105 90.5
BcaC02g09819 Brassica carinata HOM05D003591 ORTHO05D005681 2.6e-44 182.2 105 87.6
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 2.6e-44 182.2 105 87.6
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 2.6e-44 182.2 105 88.6
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 2.6e-44 182.2 105 88.6
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 2.6e-44 182.2 105 87.6
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 3.4e-44 181.8 104 88.5
BcaC06g35756 Brassica carinata HOM05D003591 ORTHO05D090311 4.4e-44 181.4 105 88.6
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 4.4e-44 181.4 105 88.6
C03p87750 Brassica napus HOM05D003591 ORTHO05D005681 7.5e-44 180.6 105 90.5
C09p13180 Brassica napus HOM05D003591 ORTHO05D005681 7.5e-44 180.6 105 90.5
BolC9t54212H Brassica oleracea HOM05D003591 ORTHO05D005681 7.5e-44 180.6 105 90.5
BcaC01g03288 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-43 179.5 104 88.5
C07p25810 Brassica napus HOM05D003591 ORTHO05D005681 8.3e-43 177.2 105 88.6
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 7.0e-42 174.1 105 85.7
BolC9t56172H Brassica oleracea HOM05D003591 ORTHO05D005681 2.0e-41 172.6 99 87.9
BcaC05g27725 Brassica carinata HOM05D003591 ORTHO05D005681 4.6e-41 171.4 103 84.5
BcaC02g10516 Brassica carinata HOM05D006890 ORTHO05D009907 2.1e-38 162.5 95 89.5
BcaC02g09280 Brassica carinata HOM05D003591 ORTHO05D093581 8.9e-37 157.1 101 82.2
BcaC03g14809 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-34 150.2 87 88.5
BcaB04g17486 Brassica carinata HOM05D003591 ORTHO05D005681 1.9e-34 149.4 105 73.3
C07p21330 Brassica napus HOM05D003591 ORTHO05D005681 4.1e-34 148.3 89 87.6
BcaB08g35320 Brassica carinata HOM05D003591 ORTHO05D005681 2.1e-33 146.0 105 69.5
BcaB01g01038 Brassica carinata HOM05D003591 ORTHO05D005681 4.6e-33 144.8 105 72.4
C07p11480 Brassica napus HOM05D003591 ORTHO05D005681 6.0e-33 144.4 79 94.9
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-32 143.3 105 67.6
BraA09t38302Z Brassica rapa HOM05D003591 ORTHO05D005681 6.6e-32 141.0 105 71.4
A09p31710 Brassica napus HOM05D003591 ORTHO05D005681 1.9e-31 139.4 105 70.5
A06p32970 Brassica napus HOM05D003591 ORTHO05D005681 4.3e-31 138.3 105 70.5
BraA02t07580Z Brassica rapa HOM05D003591 ORTHO05D005681 4.3e-31 138.3 105 70.5
BraA03t14847Z Brassica rapa HOM05D003591 ORTHO05D005681 4.3e-31 138.3 105 70.5
BraA06t26229Z Brassica rapa HOM05D003591 ORTHO05D005681 4.3e-31 138.3 105 70.5
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 5.6e-31 137.9 105 65.7
BraA05t21769Z Brassica rapa HOM05D003591 ORTHO05D005681 5.6e-31 137.9 105 70.5
A01p14520 Brassica napus HOM05D003591 ORTHO05D005681 9.5e-31 137.1 101 71.3
A05p27760 Brassica napus HOM05D003591 ORTHO05D005681 9.5e-31 137.1 101 71.3
A06p23350 Brassica napus HOM05D003591 ORTHO05D005681 9.5e-31 137.1 105 69.5
A07p03450 Brassica napus HOM05D003591 ORTHO05D005681 9.5e-31 137.1 105 68.6
A08p10960 Brassica napus HOM05D003591 ORTHO05D005681 9.5e-31 137.1 101 71.3
BraA09t37347Z Brassica rapa HOM05D003591 ORTHO05D005681 9.5e-31 137.1 107 71.0
BraA09t39581Z Brassica rapa HOM05D003591 ORTHO05D005681 1.2e-30 136.7 105 69.5
BraSC36t46030Z Brassica rapa HOM05D003591 ORTHO05D005681 1.2e-30 136.7 105 69.5
BcaB06g27013 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-30 136.3 105 66.7
A06p27640 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-30 136.3 101 70.3
A01p28000 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-30 136.0 105 69.5
C07p26060 Brassica napus HOM05D003591 ORTHO05D014535 2.8e-30 135.6 76 90.8
C04p40830 Brassica napus HOM05D003591 ORTHO05D005681 4.7e-30 134.8 79 91.1
A02p27490 Brassica napus HOM05D003591 ORTHO05D005681 8.1e-30 134.0 105 68.6
BolC6t38533H Brassica oleracea HOM05D003591 ORTHO05D005681 8.1e-30 134.0 73 94.5
BraA02t07777Z Brassica rapa HOM05D003591 ORTHO05D005681 8.1e-30 134.0 105 68.6
BraA06t25603Z Brassica rapa HOM05D003591 ORTHO05D005681 8.1e-30 134.0 105 69.5
BcaB02g10642 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-29 133.7 105 63.8
C09p26480 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-29 133.7 105 71.4
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 5.2e-29 131.3 105 61.9
C04p57200 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-29 131.3 104 71.2
BcaB04g17038 Brassica carinata HOM05D003591 ORTHO05D005681 6.8e-29 131.0 105 65.7
C09p39080 Brassica napus HOM05D003591 ORTHO05D005681 6.8e-29 131.0 105 70.5
BolC8t47808H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-28 130.2 74 91.9
BraA09t37386Z Brassica rapa HOM05D003591 ORTHO05D005681 2.0e-28 129.4 99 70.7
BcaC07g37492 Brassica carinata HOM05D003591 ORTHO05D005681 3.4e-28 128.6 74 90.5
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 4.4e-28 128.3 105 64.8
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 4.4e-28 128.3 104 62.5
BcaB06g26933 Brassica carinata HOM05D003591 ORTHO05D005681 5.8e-28 127.9 98 65.3
BolC4t25666H Brassica oleracea HOM05D003591 ORTHO05D005681 5.8e-28 127.9 74 91.9
BraA09t40594Z Brassica rapa HOM05D003591 ORTHO05D005681 5.8e-28 127.9 96 71.9
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 9.9e-28 127.1 105 60.0
BcaB08g35182 Brassica carinata HOM05D003591 ORTHO05D005681 9.9e-28 127.1 105 62.9
BcaB03g16445 Brassica carinata HOM05D003591 ORTHO05D096213 1.3e-27 126.7 104 64.4
BcaB07g33061 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-27 126.7 104 65.4
BcaB03g16209 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-27 126.3 105 59.0
BcaB03g16169 Brassica carinata HOM05D003591 ORTHO05D005681 3.7e-27 125.2 105 59.0
BcaB04g17010 Brassica carinata HOM05D003591 ORTHO05D005681 1.9e-26 122.9 105 60.0
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 2.4e-26 122.5 105 61.9
BcaB05g24452 Brassica carinata HOM05D003591 ORTHO05D005681 2.4e-26 122.5 105 61.9
BcaB07g33402 Brassica carinata HOM05D003591 ORTHO05D005681 3.2e-26 122.1 105 62.9
A01p27630 Brassica napus HOM05D003591 ORTHO05D015527 3.2e-26 122.1 105 60.0
BcaB01g01281 Brassica carinata HOM05D003591 ORTHO05D093295 5.4e-26 121.3 105 61.9
A01p26630 Brassica napus HOM05D003591 ORTHO05D015527 9.2e-26 120.6 105 59.0
BcaB01g01500 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-25 119.8 98 63.3
BcaB02g11544 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-25 119.8 105 61.0
A03p68610 Brassica napus HOM05D003591 ORTHO05D015527 2.1e-25 119.4 105 58.1
A09p31670 Brassica napus HOM05D003591 ORTHO05D015527 2.1e-25 119.4 105 58.1
A10p07270 Brassica napus HOM05D003591 ORTHO05D015527 2.1e-25 119.4 105 58.1
BcaB04g17866 Brassica carinata HOM05D003591 ORTHO05D094092 2.7e-25 119.0 95 62.1
BcaB07g33117 Brassica carinata HOM05D003591 ORTHO05D009907 2.7e-25 119.0 105 61.0
A05p29690 Brassica napus HOM05D003591 ORTHO05D015527 2.7e-25 119.0 105 58.1
C09p43990 Brassica napus HOM05D003591 ORTHO05D005681 3.5e-25 118.6 105 63.8
A03p66450 Brassica napus HOM05D003591 ORTHO05D015527 4.6e-25 118.2 105 58.1
A05p29440 Brassica napus HOM05D003591 ORTHO05D015527 4.6e-25 118.2 105 58.1
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 6.0e-25 117.9 124 54.0
A05p29680 Brassica napus HOM05D003591 ORTHO05D015527 6.0e-25 117.9 105 57.1
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 1.7e-24 116.3 104 60.6
BcaC03g15680 Brassica carinata HOM05D003591 ORTHO05D031965 1.7e-24 116.3 68 89.7
BcaB07g33018 Brassica carinata HOM05D003591 ORTHO05D092282 2.3e-24 115.9 105 57.1
BcaB04g19404 Brassica carinata HOM05D003591 ORTHO05D009907 4.3e-23 111.7 98 60.2
BcaB05g24453 Brassica carinata HOM05D003591 ORTHO05D093807 1.2e-22 110.2 99 59.6
BcaC03g14967 Brassica carinata HOM05D003591 ORTHO05D005681 2.1e-22 109.4 68 85.3
A03p63750 Brassica napus HOM05D003591 ORTHO05D103373 2.8e-22 109.0 81 72.8
A09p29800 Brassica napus HOM05D003591 ORTHO05D099288 2.8e-22 109.0 81 72.8
BraA06t23871Z Brassica rapa HOM05D003591 ORTHO05D005681 4.7e-22 108.2 75 74.7
BcaB04g18233 Brassica carinata HOM05D003591 ORTHO05D005681 6.2e-22 107.8 92 63.0
A07p22590 Brassica napus HOM05D003591 ORTHO05D099096 1.4e-21 106.7 96 62.5
A03p57820 Brassica napus HOM05D003591 ORTHO05D005681 2.0e-20 102.8 105 58.1
A06p20300 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-20 102.1 76 72.4
A08p14820 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-20 102.1 105 55.2
A01p33180 Brassica napus HOM05D003591 ORTHO05D005681 1.7e-19 99.8 105 57.1
BcaB03g16256 Brassica carinata HOM05D003591 ORTHO05D005681 2.9e-19 99.0 96 55.2
C01p26850 Brassica napus HOM05D003591 ORTHO05D014029 2.9e-19 99.0 105 54.3
C02p44880 Brassica napus HOM05D003591 ORTHO05D005681 3.8e-19 98.6 51 96.1
BcaB03g16456 Brassica carinata HOM05D003591 ORTHO05D005681 4.9e-19 98.2 74 63.5
BcaB05g23044 Brassica carinata HOM05D003591 ORTHO05D005681 4.9e-19 98.2 80 62.5
BcaB05g24917 Brassica carinata HOM05D003591 ORTHO05D005681 6.4e-19 97.8 72 68.1
BcaC09g48473 Brassica carinata HOM05D003591 ORTHO05D092369 1.1e-18 97.1 76 68.4
BcaC02g09786 Brassica carinata HOM05D003591 ORTHO05D094424 1.9e-18 96.3 71 70.4
BcaB04g18052 Brassica carinata HOM05D003591 ORTHO05D023905 1.6e-17 93.2 75 62.7
A07p05580 Brassica napus HOM05D003591 ORTHO05D005681 2.7e-17 92.4 105 54.3
BcaC09g50299 Brassica carinata HOM05D003591 ORTHO05D005681 6.0e-17 91.3 53 83.0
BcaB04g18191 Brassica carinata HOM05D003591 ORTHO05D023905 7.8e-17 90.9 74 59.5
A05p23640 Brassica napus HOM05D003591 ORTHO05D005681 2.5e-15 85.9 48 89.6
BraA05t21231Z Brassica rapa HOM05D003591 ORTHO05D005681 2.5e-15 85.9 48 89.6
BcaB06g26777 Brassica carinata HOM05D003591 ORTHO05D023905 1.3e-14 83.6 74 54.1
BcaNung06545 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-14 83.2 84 56.0
BcaB04g17398 Brassica carinata HOM05D003591 ORTHO05D091303 1.8e-13 79.7 64 60.9
A09p40910 Brassica napus HOM05D003591 ORTHO05D099409 3.1e-13 79.0 54 77.8
BolC8t50331H Brassica oleracea HOM05D003591 ORTHO05D005681 3.1e-13 79.0 76 63.2
A05p31230 Brassica napus HOM05D003591 ORTHO05D100173 1.2e-12 77.0 83 55.4
BcaB05g23446 Brassica carinata HOM05D003591 ORTHO05D023905 1.5e-12 76.6 61 59.0
BcaC03g14227 Brassica carinata HOM05D003591 ORTHO05D005681 3.4e-12 75.5 53 69.8
A05p23340 Brassica napus HOM05D003591 ORTHO05D015527 4.4e-12 75.1 92 47.8
BcaC07g40267 Brassica carinata HOM05D003591 ORTHO05D005681 9.9e-12 73.9 53 67.9
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 1.3e-11 73.6 88 51.1
BcaB04g18787 Brassica carinata HOM05D003591 ORTHO05D095528 6.4e-11 71.2 60 60.0
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 1.6e-09 66.6 100 37.0
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 4.6e-09 65.1 104 38.5
BcaB04g17638 Brassica carinata HOM05D003591 ORTHO05D005681 6.0e-09 64.7 47 63.8
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 1.7e-08 63.2 104 37.5
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 3.0e-08 62.4 104 36.5
BcaB07g32445 Brassica carinata HOM05D003591 ORTHO05D023905 3.9e-08 62.0 43 65.1
BNapus_Darmor_BZH_scaffold_103p00030 Brassica napus HOM05D003591 ORTHO05D015462 1.9e-07 59.7 48 60.4
BNapus_Darmor_BZH_scaffold_104p00030 Brassica napus HOM05D003591 ORTHO05D015462 1.9e-07 59.7 48 60.4
BraSC36t46101Z Brassica rapa HOM05D003591 ORTHO05D015462 1.9e-07 59.7 48 60.4
BolC7t43136H Brassica oleracea HOM05D003591 ORTHO05D042843 4.3e-07 58.5 30 90.0
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 5.6e-07 58.2 101 33.7
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 9.6e-07 57.4 96 37.5
BcaB07g33924 Brassica carinata HOM05D006890 ORTHO05D009907 1.3e-06 57.0 42 61.9
C04p13460 Brassica napus HOM05D003591 ORTHO05D015462 1.6e-06 56.6 48 58.3
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 3.6e-06 55.5 123 31.7
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 3.6e-06 55.5 123 31.7
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 4.8e-06 55.1 96 36.5
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 4.8e-06 55.1 96 36.5
BraA03t15698Z Brassica rapa HOM05D003591 ORTHO05D015462 8.1e-06 54.3 48 56.2
BraA09t38695Z Brassica rapa HOM05D003591 ORTHO05D015462 8.1e-06 54.3 48 56.2


User provided reference genes

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