Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49514 Brassica carinata HOM05D001086 ORTHO05D009904 2.1e-52 208.8 104 100.0
BcaC02g09318 Brassica carinata HOM05D001086 ORTHO05D009904 1.1e-50 203.0 104 97.1
BcaC03g17428 Brassica carinata HOM05D001086 ORTHO05D009904 1.1e-50 203.0 104 97.1
BcaC08g43966 Brassica carinata HOM05D001086 ORTHO05D009904 1.1e-50 203.0 104 97.1
BcaC01g03337 Brassica carinata HOM05D001086 ORTHO05D009904 4.3e-50 201.1 104 96.2
BcaC03g13592 Brassica carinata HOM05D001086 ORTHO05D009904 1.3e-49 199.5 104 96.2
BcaC06g34058 Brassica carinata HOM05D001086 ORTHO05D009904 1.3e-46 189.5 99 94.9
BolC1t03658H Brassica oleracea HOM05D001086 ORTHO05D009904 5.4e-45 184.1 94 96.8
BcaB04g18059 Brassica carinata HOM05D001086 ORTHO05D009904 1.7e-43 179.1 101 88.1
BolC4t22507H Brassica oleracea HOM05D001086 ORTHO05D009904 5.1e-43 177.6 99 89.9
BolC6t39064H Brassica oleracea HOM05D001086 ORTHO05D009904 1.5e-42 176.0 93 92.5
BolC7t44295H Brassica oleracea HOM05D001086 ORTHO05D009904 4.3e-42 174.5 93 94.6
BraA08t32231Z Brassica rapa HOM05D001086 ORTHO05D001112 7.3e-42 173.7 92 92.4
BolC3t14117H Brassica oleracea HOM05D001086 ORTHO05D009904 5.3e-40 167.5 104 84.6
BolC4t24924H Brassica oleracea HOM05D001086 ORTHO05D009904 7.6e-39 163.7 87 93.1
BolC1t04057H Brassica oleracea HOM05D001086 ORTHO05D009904 3.0e-35 151.8 76 97.4
BcaB05g22654 Brassica carinata HOM05D001086 ORTHO05D009904 9.6e-34 146.7 88 84.1
BolC9t57564H Brassica oleracea HOM05D001086 ORTHO05D009904 5.5e-29 131.0 98 73.5
BolC4t27683H Brassica oleracea HOM05D001086 ORTHO05D009904 1.6e-28 129.4 67 95.5
BolC2t10559H Brassica oleracea HOM05D001086 ORTHO05D009904 1.6e-25 119.4 62 91.9
BolC9t58218H Brassica oleracea HOM05D001086 ORTHO05D009904 2.4e-24 115.5 63 87.3
BcaC03g15388 Brassica carinata HOM05D001086 ORTHO05D009904 5.0e-22 107.8 75 77.3
BolC5t30470H Brassica oleracea HOM05D001086 ORTHO05D001112 1.4e-21 106.3 58 86.2
BcaB04g18289 Brassica carinata HOM05D001086 ORTHO05D009904 2.5e-21 105.5 84 59.5
BolC9t57792H Brassica oleracea HOM05D001086 ORTHO05D001112 9.3e-21 103.6 85 58.8
Aa31sc688G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 7.9e-20 100.5 85 58.8
Aa31sc74G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.3e-19 99.8 97 54.6
Aa31sc135G30 Aethionema arabicum HOM05D001086 ORTHO05D009904 6.7e-19 97.4 90 54.4
Aa31LG8G12280 Aethionema arabicum HOM05D001086 ORTHO05D009904 8.7e-19 97.1 87 56.3
BcaB08g35690 Brassica carinata HOM05D001086 ORTHO05D009904 8.7e-19 97.1 84 61.9
BcaC02g11220 Brassica carinata HOM05D001086 ORTHO05D009904 8.7e-19 97.1 91 57.1
BcaC08g43692 Brassica carinata HOM05D001086 ORTHO05D009904 8.7e-19 97.1 81 59.3
BcaB04g17791 Brassica carinata HOM05D001086 ORTHO05D009904 1.5e-18 96.3 84 57.1
Aa31LG2G17950 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.9e-18 95.9 90 55.6
Aa31sc250G50 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.5e-18 95.5 84 57.1
Aa31sc21G160 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.3e-18 95.1 87 57.5
Aa31sc360G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.7e-18 93.6 85 54.1
Aa31sc41G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 9.7e-18 93.6 89 53.9
BcaNung02439 Brassica carinata HOM05D001086 ORTHO05D009904 1.3e-17 93.2 84 56.0
BolC8t50117H Brassica oleracea HOM05D001086 ORTHO05D009904 3.7e-17 91.7 90 53.3
BolC9t57246H Brassica oleracea HOM05D001086 ORTHO05D009904 3.7e-17 91.7 74 59.5
Aa31sc142G50 Aethionema arabicum HOM05D001086 ORTHO05D009904 8.2e-17 90.5 84 53.6
Aa31sc259G20 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.4e-16 89.7 85 52.9
Aa31sc309G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.4e-16 89.7 96 52.1
Aa31sc1568G20 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.8e-16 89.4 84 53.6
Aa31LG1G5710 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.4e-16 89.0 87 51.7
BolC2t08115H Brassica oleracea HOM05D001086 ORTHO05D009904 6.9e-16 87.4 72 58.3
Aa31sc1206G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 7.2e-13 77.4 100 47.0
Aa31sc555G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.2e-12 76.6 61 62.3
Aa31LG7G11710 Aethionema arabicum HOM05D001086 ORTHO05D009904 7.9e-12 73.9 70 55.7
Aa31sc465G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 7.9e-12 73.9 61 59.0
BcaB02g06425 Brassica carinata HOM05D001086 ORTHO05D009904 2.3e-11 72.4 77 57.1
BcaC04g21846 Brassica carinata HOM05D001086 ORTHO05D009904 8.8e-11 70.5 71 53.5
BcaC06g34115 Brassica carinata HOM05D001086 ORTHO05D009904 2.0e-10 69.3 76 57.9
C02p56970 Brassica napus HOM05D017026 ORTHO05D020016 4.3e-10 68.2 50 60.0
BcaC03g15312 Brassica carinata HOM05D001086 ORTHO05D009904 5.7e-10 67.8 47 83.0
BcaC09g49251 Brassica carinata HOM05D001086 ORTHO05D009904 6.3e-09 64.3 96 40.6
Aa31csc81G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.2e-07 60.1 87 44.8
Aa31sc99G90 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.0e-07 59.3 58 55.2
Aa31sc116G30 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.4e-07 58.5 51 54.9
Aa31sc639G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 4.5e-07 58.2 50 58.0


User provided reference genes

Program Settings