Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49508 Brassica carinata HOM05D033252 ORTHO05D000411 3.5e-100 368.2 180 100.0
BcaC02g08332 Brassica carinata HOM05D033252 ORTHO05D000411 7.9e-84 313.9 176 89.2
BcaC04g22246 Brassica carinata HOM05D033252 ORTHO05D000411 2.8e-28 129.4 68 95.6
BraA02t07562Z Brassica rapa HOM05D057546 ORTHO05D107621 1.9e-21 106.7 61 85.2
BcaNung04302 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-14 84.0 82 57.3
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-14 82.4 58 74.1
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-14 81.6 60 70.0
BolC5t32675H Brassica oleracea HOM05D000496 ORTHO05D000411 6.6e-14 81.6 82 56.1
BcaC05g29488 Brassica carinata HOM05D000496 ORTHO05D000411 8.6e-14 81.3 60 71.7
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-13 80.9 58 74.1
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-13 80.5 61 70.5
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-13 80.5 58 72.4
BolC1t03568H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-13 80.5 58 72.4
BolC3t19455H Brassica oleracea HOM05D000496 ORTHO05D032668 1.5e-13 80.5 61 70.5
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-13 80.5 58 72.4
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-13 80.1 71 60.6
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 1.9e-13 80.1 59 71.2
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-13 79.7 58 72.4
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-13 79.3 60 68.3
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-13 79.0 60 68.3
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-13 79.0 58 69.0
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-13 78.2 59 72.9
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-13 78.2 60 66.7
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 9.5e-13 77.8 61 67.2
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 9.5e-13 77.8 60 70.0
BcaB01g02818 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-12 77.0 60 68.3
BcaC04g19439 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-12 77.0 59 69.5
BcaC04g21193 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-12 77.0 57 70.2
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-12 77.0 58 72.4
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-12 76.6 59 67.8
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 2.1e-12 76.6 59 67.8
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 2.1e-12 76.6 58 72.4
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-12 76.3 61 67.2
BraA04t16615Z Brassica rapa HOM05D000496 ORTHO05D000411 3.6e-12 75.9 78 55.1
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-12 75.5 61 68.9
BcaC03g16657 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-12 75.5 59 69.5
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 6.2e-12 75.1 61 65.6
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-12 74.7 61 65.6
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-11 74.3 60 63.3
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-11 73.6 58 65.5
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-11 73.6 59 67.8
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-11 72.8 59 61.0
C06p42420 Brassica napus HOM05D000496 ORTHO05D000411 4.0e-11 72.4 60 66.7
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-11 72.0 56 69.6
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-10 70.9 49 77.6
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-10 70.5 49 77.6
BcaC09g49300 Brassica carinata HOM05D000496 ORTHO05D023877 1.5e-10 70.5 61 65.6
C01p40400 Brassica napus HOM05D000496 ORTHO05D023877 1.5e-10 70.5 61 65.6
BraA08t32350Z Brassica rapa HOM05D000496 ORTHO05D027404 3.4e-10 69.3 57 64.9
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-10 68.9 60 63.3
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 5.8e-10 68.6 60 61.7
BcaC04g21355 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-10 67.8 59 61.0
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-09 66.6 59 62.7
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-09 66.2 82 47.6
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-09 66.2 47 74.5
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 2.9e-09 66.2 47 72.3
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 3.7e-09 65.9 46 73.9
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 6.4e-09 65.1 60 58.3
BcaC01g00534 Brassica carinata HOM05D000020 ORTHO05D000543 8.3e-09 64.7 60 61.7
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-08 64.3 47 72.3
BcaC02g07871 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-08 64.3 56 64.3
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-08 64.3 48 72.9
Thhalv10019737m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.4e-08 63.2 59 62.7
BcaC05g26989 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-08 62.8 56 62.5
BcaB04g17268 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-08 62.0 60 56.7
Thhalv10009841m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.2e-08 61.2 59 57.6
BcaB03g16361 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-07 60.5 82 46.3
BcaC01g02265 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-07 59.3 48 64.6
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-07 59.3 59 55.9
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-07 59.3 60 51.7
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 3.5e-07 59.3 60 55.0
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 3.5e-07 59.3 60 55.0
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-07 58.9 82 43.9
Sp3g23630 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.6e-07 58.9 81 43.2
BcaC09g49480 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-06 57.0 39 76.9
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-06 56.6 60 50.0
BolC8t47690H Brassica oleracea HOM05D000496 ORTHO05D000411 5.0e-06 55.5 60 50.0
Thhalv10000620m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.0e-06 55.5 59 54.2
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-06 55.1 46 67.4
BcaC01g02090 Brassica carinata HOM05D010266 ORTHO05D000411 8.6e-06 54.7 43 67.4
Thhalv10027058m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.6e-06 54.7 59 52.5
Sp1g31040 Schrenkiella parvula HOM05D000496 ORTHO05D000411 8.6e-06 54.7 90 43.3


User provided reference genes

Program Settings