Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49494 Brassica carinata HOM05D009722 ORTHO05D000411 9.9e-107 390.2 206 100.0
BcaC09g49495 Brassica carinata HOM05D009722 ORTHO05D000411 5.6e-86 321.2 175 98.9
BcaC08g43695 Brassica carinata HOM05D009722 ORTHO05D000411 5.5e-57 224.9 203 67.0
BcaC05g27957 Brassica carinata HOM05D009722 ORTHO05D094851 7.0e-28 128.3 113 68.1
BcaC02g08417 Brassica carinata HOM05D009722 ORTHO05D039144 1.0e-26 124.4 173 47.4
A01p25350 Brassica napus HOM05D009722 ORTHO05D099801 8.0e-24 114.8 72 84.7
C02p36730 Brassica napus HOM05D009722 ORTHO05D039144 3.0e-18 96.3 95 57.9
BcaC01g02116 Brassica carinata HOM05D009722 ORTHO05D032209 3.9e-18 95.9 137 48.2
C03p68410 Brassica napus HOM05D009722 ORTHO05D032209 3.9e-18 95.9 137 48.2
BolC3t19076H Brassica oleracea HOM05D009722 ORTHO05D032209 3.9e-18 95.9 137 48.2
BolC3t20480H Brassica oleracea HOM05D009722 ORTHO05D000411 2.5e-17 93.2 150 42.7
C03p82040 Brassica napus HOM05D000496 ORTHO05D000411 4.3e-17 92.4 179 39.1
BcaB04g17801 Brassica carinata HOM05D009722 ORTHO05D000411 5.2e-15 85.5 183 42.1
BcaB06g26620 Brassica carinata HOM05D009722 ORTHO05D000411 5.8e-14 82.0 180 39.4
BolC7t40938H Brassica oleracea HOM05D009722 ORTHO05D027247 2.9e-13 79.7 199 38.2
BcaB05g22903 Brassica carinata HOM05D009722 ORTHO05D000411 1.1e-12 77.8 178 37.1
BcaC06g36324 Brassica carinata HOM05D000496 ORTHO05D027247 2.4e-12 76.6 172 39.5
C07p05370 Brassica napus HOM05D009722 ORTHO05D027247 2.0e-11 73.6 197 37.6
BcaB01g01934 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-11 73.2 187 35.8
BcaC09g49744 Brassica carinata HOM05D009722 ORTHO05D000411 1.0e-10 71.2 51 74.5
C06p41580 Brassica napus HOM05D009722 ORTHO05D102622 1.7e-10 70.5 153 39.2
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 1.5e-09 67.4 94 45.7
BcaC08g46291 Brassica carinata HOM05D000496 ORTHO05D027247 1.9e-09 67.0 198 34.8
BcaB01g01299 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-09 65.5 213 34.7
BcaB06g27750 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-09 65.1 169 36.7
BcaB02g06959 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-08 63.9 180 36.1
BcaC07g37521 Brassica carinata HOM05D009722 ORTHO05D031879 2.8e-08 63.2 208 34.6
BcaB04g17505 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-07 58.9 178 37.6
BcaB04g17415 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-06 57.8 137 35.8
BcaB08g34793 Brassica carinata HOM05D036832 ORTHO05D000411 1.5e-06 57.4 175 32.0


User provided reference genes

Program Settings