Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49317 Brassica carinata HOM05D007338 ORTHO05D009406 3.6e-51 204.5 95 100.0
BcaC09g49320 Brassica carinata HOM05D007338 ORTHO05D009406 3.1e-47 191.4 106 87.7
BraA01t03132Z Brassica rapa HOM05D007338 ORTHO05D009406 9.1e-47 189.9 106 85.8
BcaC09g49315 Brassica carinata HOM05D007338 ORTHO05D009406 1.7e-45 185.7 99 89.9
C01p38040 Brassica napus HOM05D007338 ORTHO05D009406 8.5e-45 183.3 107 84.1
C01p37960 Brassica napus HOM05D007338 ORTHO05D009406 4.2e-44 181.0 106 82.1
A01p30000 Brassica napus HOM05D007338 ORTHO05D009406 8.2e-32 140.2 78 84.6
C01p37940 Brassica napus HOM05D007338 ORTHO05D009406 8.2e-32 140.2 78 84.6
BcaC09g49318 Brassica carinata HOM05D007338 ORTHO05D009406 1.1e-31 139.8 78 83.3
BcaC09g49319 Brassica carinata HOM05D007338 ORTHO05D009406 1.1e-31 139.8 78 83.3
BcaC09g49324 Brassica carinata HOM05D007338 ORTHO05D009406 1.1e-31 139.8 78 83.3
A01p29990 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-31 139.8 78 83.3
A01p30010 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-31 139.8 78 83.3
A01p30020 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-31 139.8 78 83.3
A01p30030 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-31 139.8 78 83.3
C01p37910 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-31 139.8 78 83.3
C01p37970 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-31 139.8 78 83.3
C01p37980 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-31 139.8 78 83.3
A01p30050 Brassica napus HOM05D007338 ORTHO05D009406 2.4e-31 138.7 78 82.1
BcaB04g20324 Brassica carinata HOM05D007338 ORTHO05D009406 3.1e-31 138.3 78 80.8
A01p30040 Brassica napus HOM05D007338 ORTHO05D009406 3.1e-31 138.3 78 82.1
BcaC09g49311 Brassica carinata HOM05D007338 ORTHO05D009406 4.1e-31 137.9 78 82.1
BcaC09g49314 Brassica carinata HOM05D007338 ORTHO05D009406 4.1e-31 137.9 78 82.1
C01p38030 Brassica napus HOM05D007338 ORTHO05D009406 4.1e-31 137.9 78 82.1
BcaC09g49321 Brassica carinata HOM05D007338 ORTHO05D009406 5.3e-31 137.5 78 82.1
C01p37930 Brassica napus HOM05D007338 ORTHO05D009406 5.3e-31 137.5 78 82.1
A01p30060 Brassica napus HOM05D007338 ORTHO05D009406 7.0e-31 137.1 78 82.1
BcaC09g49322 Brassica carinata HOM05D007338 ORTHO05D009406 9.1e-31 136.7 78 80.8
C01p37920 Brassica napus HOM05D007338 ORTHO05D009406 9.1e-31 136.7 78 80.8
C01p37950 Brassica napus HOM05D007338 ORTHO05D009406 9.1e-31 136.7 77 81.8
BcaC09g49309 Brassica carinata HOM05D007338 ORTHO05D009406 1.2e-30 136.3 78 80.8
A01p30070 Brassica napus HOM05D007338 ORTHO05D009406 1.2e-30 136.3 76 82.9
C01p38060 Brassica napus HOM05D007338 ORTHO05D009406 1.2e-30 136.3 78 80.8
BcaC09g49310 Brassica carinata HOM05D007338 ORTHO05D009406 1.6e-30 136.0 79 82.3
BolC1t03768H Brassica oleracea HOM05D007338 ORTHO05D009406 1.6e-30 136.0 79 82.3
BcaB04g20323 Brassica carinata HOM05D007338 ORTHO05D009406 2.0e-30 135.6 78 80.8
BraA01t03129Z Brassica rapa HOM05D007338 ORTHO05D009406 3.5e-30 134.8 85 75.3
BraA01t03131Z Brassica rapa HOM05D007338 ORTHO05D009406 3.5e-30 134.8 85 75.3
BraA01t03133Z Brassica rapa HOM05D007338 ORTHO05D009406 3.5e-30 134.8 85 75.3
BraA01t03134Z Brassica rapa HOM05D007338 ORTHO05D009406 3.5e-30 134.8 85 75.3
BraA01t03136Z Brassica rapa HOM05D007338 ORTHO05D009406 3.5e-30 134.8 85 75.3
BraA01t03130Z Brassica rapa HOM05D007338 ORTHO05D009406 4.5e-30 134.4 86 74.4
BcaC09g49316 Brassica carinata HOM05D007338 ORTHO05D009406 5.9e-30 134.0 78 79.5
C01p38000 Brassica napus HOM05D007338 ORTHO05D009406 5.9e-30 134.0 78 79.5
C01p38020 Brassica napus HOM05D007338 ORTHO05D009406 1.7e-29 132.5 85 74.1
BolC1t03766H Brassica oleracea HOM05D007338 ORTHO05D009406 1.7e-29 132.5 85 74.1
BraA01t03137Z Brassica rapa HOM05D007338 ORTHO05D009406 1.7e-29 132.5 85 74.1
BraA01t03135Z Brassica rapa HOM05D007338 ORTHO05D009406 2.5e-28 128.6 85 72.9
BolC1t03760H Brassica oleracea HOM05D007338 ORTHO05D009406 3.3e-25 118.2 54 94.4
BcaC07g40398 Brassica carinata HOM05D007338 ORTHO05D009406 2.2e-16 89.0 89 51.7
Carub.0005s1075 Capsella rubella HOM05D007338 ORTHO05D009406 8.3e-16 87.0 80 53.8
BcaC06g31804 Brassica carinata HOM05D007338 ORTHO05D009406 1.8e-15 85.9 78 51.3
AL5G42110 Arabidopsis lyrata HOM05D007338 ORTHO05D009406 2.4e-15 85.5 78 53.8
BcaC06g31805 Brassica carinata HOM05D007338 ORTHO05D009406 2.4e-15 85.5 78 51.3
Sp5g03420 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.4e-15 84.3 99 45.5
Carub.0005s1076 Capsella rubella HOM05D007338 ORTHO05D009406 9.1e-15 83.6 80 52.5
AT3G59930 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.6e-14 82.8 78 52.6
C09p21400 Brassica napus HOM05D007338 ORTHO05D009406 2.7e-14 82.0 73 49.3
Sp6g08720 Schrenkiella parvula HOM05D007338 ORTHO05D009406 3.5e-14 81.6 98 44.9
AT5G33355 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 7.7e-14 80.5 78 51.3
Sp5g03390 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.7e-13 79.3 91 45.1
C04p48140 Brassica napus HOM05D007338 ORTHO05D009406 5.0e-13 77.8 93 43.0
BolC4t26404H Brassica oleracea HOM05D007338 ORTHO05D009406 5.0e-13 77.8 93 43.0
BolC9t55025H Brassica oleracea HOM05D007338 ORTHO05D009406 5.0e-13 77.8 83 44.6
A04p14100 Brassica napus HOM05D007338 ORTHO05D009406 6.5e-13 77.4 93 41.9
C09p21390 Brassica napus HOM05D007338 ORTHO05D009406 6.5e-13 77.4 83 42.2
BraA04t17071Z Brassica rapa HOM05D007338 ORTHO05D009406 6.5e-13 77.4 93 41.9
BcaB06g27588 Brassica carinata HOM05D007338 ORTHO05D009406 8.6e-13 77.0 93 41.9
BcaB06g27589 Brassica carinata HOM05D007338 ORTHO05D009406 8.6e-13 77.0 93 41.9
Sp5g03400 Schrenkiella parvula HOM05D007338 ORTHO05D009406 8.6e-13 77.0 91 44.0
Sp2g03780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 43.3
Sp7g00850 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.1e-12 76.6 89 40.4
Sp5g03410 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.9e-12 75.9 46 67.4
Sp6g08680 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.9e-12 75.9 46 67.4
BcaC04g22279 Brassica carinata HOM05D007338 ORTHO05D009406 2.5e-12 75.5 90 40.0
BcaC04g22284 Brassica carinata HOM05D007338 ORTHO05D009406 2.5e-12 75.5 90 41.1
BolC9t55035H Brassica oleracea HOM05D007338 ORTHO05D009406 2.5e-12 75.5 90 40.0
Sp5g03380 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.5e-12 75.5 46 67.4
C09p21220 Brassica napus HOM05D007338 ORTHO05D009406 3.2e-12 75.1 90 41.1
A09p17160 Brassica napus HOM05D007338 ORTHO05D009406 7.2e-12 73.9 90 37.8
Sp4g10780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 7.2e-12 73.9 45 66.7
AT1G34047 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 2.1e-11 72.4 79 48.1
C01p38010 Brassica napus HOM05D007338 ORTHO05D100686 2.8e-11 72.0 39 92.3
BcaB07g31240 Brassica carinata HOM05D007338 ORTHO05D009406 4.7e-11 71.2 90 40.0
C09p21230 Brassica napus HOM05D007338 ORTHO05D009406 4.7e-11 71.2 81 43.2
BcaB08g34762 Brassica carinata HOM05D007338 ORTHO05D009406 1.8e-10 69.3 94 43.6
BcaB07g31237 Brassica carinata HOM05D007338 ORTHO05D009406 2.3e-10 68.9 46 60.9
BcaB07g31238 Brassica carinata HOM05D007338 ORTHO05D009406 2.3e-10 68.9 46 60.9
Sp3g32460 Schrenkiella parvula HOM05D007338 ORTHO05D009406 3.0e-10 68.6 100 39.0
BolC1t03757H Brassica oleracea HOM05D007338 ORTHO05D009406 5.2e-10 67.8 77 50.6
SpUn1255_0010 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.7e-09 64.3 78 37.2
CARHR284260 Cardamine hirsuta HOM05D007338 ORTHO05D009406 1.3e-08 63.2 56 53.6
Sp3g31220 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.2e-08 62.4 86 37.2
Sp7g07650 Schrenkiella parvula HOM05D007338 ORTHO05D009406 4.9e-08 61.2 92 38.0
Sp3g31250 Schrenkiella parvula HOM05D007338 ORTHO05D009406 8.3e-08 60.5 76 39.5
CARHR101940 Cardamine hirsuta HOM05D007338 ORTHO05D009406 1.6e-06 56.2 67 44.8
AL4G15700 Arabidopsis lyrata HOM05D007338 ORTHO05D013190 4.5e-06 54.7 78 38.5
Carub.0005s1072 Capsella rubella HOM05D007338 ORTHO05D009406 7.8e-06 53.9 48 47.9
Carub.0005s1073 Capsella rubella HOM05D007338 ORTHO05D009406 7.8e-06 53.9 48 47.9
Carub.0005s1074 Capsella rubella HOM05D007338 ORTHO05D009406 7.8e-06 53.9 48 47.9


User provided reference genes

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