Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49285 Brassica carinata HOM05D004230 ORTHO05D032226 4.4e-59 231.1 117 100.0
C08p01070 Brassica napus HOM05D004230 ORTHO05D007976 2.3e-39 165.6 103 87.4
BcaC07g36911 Brassica carinata HOM05D004230 ORTHO05D007976 5.0e-23 111.3 60 95.0
BolC8t46909H Brassica oleracea HOM05D004230 ORTHO05D007976 1.1e-22 110.2 57 96.5
BcaB07g32180 Brassica carinata HOM05D004230 ORTHO05D007976 3.1e-20 102.1 60 86.7
BcaB05g22916 Brassica carinata HOM05D004230 ORTHO05D032226 2.1e-13 79.3 93 51.6
A09p35300 Brassica napus HOM05D004230 ORTHO05D007976 5.8e-11 71.2 55 63.6
BraA09t39059Z Brassica rapa HOM05D004230 ORTHO05D007976 5.8e-11 71.2 55 63.6
BcaC07g39750 Brassica carinata HOM05D004230 ORTHO05D027608 7.5e-11 70.9 61 59.0
C08p29240 Brassica napus HOM05D004230 ORTHO05D027608 7.5e-11 70.9 61 59.0
BolC8t50525H Brassica oleracea HOM05D004230 ORTHO05D027608 7.5e-11 70.9 61 59.0
BcaC03g16826 Brassica carinata HOM05D004230 ORTHO05D007976 1.3e-10 70.1 52 65.4
C01p36620 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-10 70.1 55 61.8
C07p48530 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-10 70.1 52 65.4
BolC1t03622H Brassica oleracea HOM05D004230 ORTHO05D007976 1.3e-10 70.1 55 61.8
BolC6t36485H Brassica oleracea HOM05D004230 ORTHO05D007976 1.3e-10 70.1 52 65.4
BolC7t45361H Brassica oleracea HOM05D004230 ORTHO05D007976 1.3e-10 70.1 52 65.4
A03p63250 Brassica napus HOM05D004230 ORTHO05D007976 1.7e-10 69.7 53 66.0
BraA03t15403Z Brassica rapa HOM05D004230 ORTHO05D007976 1.7e-10 69.7 53 66.0
BcaC02g08615 Brassica carinata HOM05D004230 ORTHO05D007976 6.4e-10 67.8 52 65.4
C07p53510 Brassica napus HOM05D004230 ORTHO05D027608 6.4e-10 67.8 55 61.8
BcaC08g43996 Brassica carinata HOM05D004230 ORTHO05D007976 3.5e-08 62.0 60 53.3
C01p22970 Brassica napus HOM05D004230 ORTHO05D007976 4.6e-08 61.6 67 49.3
AL1G50740 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 7.8e-08 60.8 78 42.3
BcaB05g23135 Brassica carinata HOM05D004230 ORTHO05D007976 7.8e-08 60.8 53 54.7
BcaC09g52278 Brassica carinata HOM05D004230 ORTHO05D007976 7.8e-08 60.8 67 47.8
C01p40550 Brassica napus HOM05D004230 ORTHO05D007976 7.8e-08 60.8 67 47.8
BolC1t02226H Brassica oleracea HOM05D004230 ORTHO05D007976 7.8e-08 60.8 67 47.8
BolC4t28062H Brassica oleracea HOM05D004230 ORTHO05D007976 7.8e-08 60.8 67 47.8
BraA06t24715Z Brassica rapa HOM05D004230 ORTHO05D007976 7.8e-08 60.8 67 47.8
Sp5g19020 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.3e-07 60.1 65 49.2
SpUn0171_0010 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.3e-07 60.1 65 49.2
C01p22920 Brassica napus HOM05D004230 ORTHO05D007976 3.0e-07 58.9 67 46.3
C04p52580 Brassica napus HOM05D004230 ORTHO05D007976 3.0e-07 58.9 67 46.3
C05p46310 Brassica napus HOM05D004230 ORTHO05D032226 6.6e-07 57.8 90 42.2
BcaC09g49286 Brassica carinata HOM05D004230 ORTHO05D007976 8.6e-07 57.4 67 46.3
AL8G19300 Arabidopsis lyrata HOM05D004230 ORTHO05D000037 1.1e-06 57.0 67 46.3
AL5G11160 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 5.6e-06 54.7 46 56.5
BcaC05g28343 Brassica carinata HOM05D004230 ORTHO05D007976 5.6e-06 54.7 60 48.3


User provided reference genes

Program Settings