Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49284 Brassica carinata HOM05D004230 ORTHO05D007976 2.1e-73 278.9 134 100.0
BolC8t46909H Brassica oleracea HOM05D004230 ORTHO05D007976 1.8e-53 212.6 115 91.3
BcaC07g36911 Brassica carinata HOM05D004230 ORTHO05D007976 5.4e-53 211.1 114 91.2
C08p01070 Brassica napus HOM05D004230 ORTHO05D007976 2.0e-52 209.1 114 90.4
BcaC03g16826 Brassica carinata HOM05D004230 ORTHO05D007976 7.5e-47 190.7 135 69.6
C07p48530 Brassica napus HOM05D004230 ORTHO05D007976 3.5e-44 181.8 129 69.0
BolC7t45361H Brassica oleracea HOM05D004230 ORTHO05D007976 3.5e-44 181.8 129 69.0
BraA09t39059Z Brassica rapa HOM05D004230 ORTHO05D007976 8.6e-43 177.2 126 69.8
BcaC09g49449 Brassica carinata HOM05D004230 ORTHO05D007976 3.3e-42 175.3 129 67.4
A09p35300 Brassica napus HOM05D004230 ORTHO05D007976 2.1e-41 172.6 126 68.3
BraA03t15403Z Brassica rapa HOM05D004230 ORTHO05D007976 1.0e-40 170.2 142 63.4
BolC6t36485H Brassica oleracea HOM05D004230 ORTHO05D007976 4.0e-40 168.3 130 65.4
C03p27680 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-39 166.8 130 64.6
BolC5t33361H Brassica oleracea HOM05D004230 ORTHO05D007976 3.5e-36 155.2 130 62.3
AL5G11160 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 5.6e-34 147.9 116 58.6
Carub.0012s0003 Capsella rubella HOM05D004230 ORTHO05D007976 1.2e-33 146.7 114 60.5
C01p40550 Brassica napus HOM05D004230 ORTHO05D007976 3.1e-32 142.1 162 48.1
A06p33150 Brassica napus HOM05D004230 ORTHO05D007976 1.5e-31 139.8 127 52.0
BraA06t26245Z Brassica rapa HOM05D004230 ORTHO05D007976 1.5e-31 139.8 127 52.8
BolC5t30511H Brassica oleracea HOM05D004230 ORTHO05D007976 3.4e-31 138.7 128 53.9
C07p50550 Brassica napus HOM05D004230 ORTHO05D007976 4.4e-31 138.3 128 53.9
BolC3t17847H Brassica oleracea HOM05D004230 ORTHO05D007976 5.8e-31 137.9 128 53.9
BolC2t08696H Brassica oleracea HOM05D004230 ORTHO05D007976 7.5e-31 137.5 128 54.7
C01p36620 Brassica napus HOM05D004230 ORTHO05D007976 1.7e-30 136.3 77 83.1
BolC1t03622H Brassica oleracea HOM05D004230 ORTHO05D007976 1.7e-30 136.3 77 83.1
C06p14020 Brassica napus HOM05D004230 ORTHO05D007976 2.2e-30 136.0 127 52.8
BcaB06g26529 Brassica carinata HOM05D004230 ORTHO05D007976 3.7e-30 135.2 128 53.1
BcaC02g08615 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-29 133.7 129 55.0
Carub.0007s3043 Capsella rubella HOM05D004230 ORTHO05D007976 1.4e-29 133.3 115 56.5
C05p44100 Brassica napus HOM05D004230 ORTHO05D007976 1.9e-29 132.9 103 59.2
BraA01t02220Z Brassica rapa HOM05D004230 ORTHO05D007976 1.9e-29 132.9 103 59.2
C08p27070 Brassica napus HOM05D004230 ORTHO05D007976 3.2e-29 132.1 104 58.7
C01p22920 Brassica napus HOM05D004230 ORTHO05D007976 5.4e-29 131.3 88 69.3
BraA06t24715Z Brassica rapa HOM05D004230 ORTHO05D007976 5.4e-29 131.3 88 69.3
BcaC09g52278 Brassica carinata HOM05D004230 ORTHO05D007976 7.0e-29 131.0 88 69.3
BolC1t02226H Brassica oleracea HOM05D004230 ORTHO05D007976 7.0e-29 131.0 88 69.3
C01p22890 Brassica napus HOM05D004230 ORTHO05D007976 2.0e-28 129.4 88 68.2
C01p22970 Brassica napus HOM05D004230 ORTHO05D007976 3.5e-28 128.6 88 68.2
BolC8t50322H Brassica oleracea HOM05D004230 ORTHO05D007976 4.6e-28 128.3 110 54.5
BcaB07g32180 Brassica carinata HOM05D004230 ORTHO05D007976 1.9e-26 122.9 104 64.4
BolC4t28062H Brassica oleracea HOM05D004230 ORTHO05D007976 1.9e-26 122.9 88 68.2
BolC4t26773H Brassica oleracea HOM05D004230 ORTHO05D007976 1.6e-25 119.8 95 63.2
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 2.8e-25 119.0 127 46.5
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 3.6e-25 118.6 102 52.9
C02p00010 Brassica napus HOM05D004230 ORTHO05D007976 3.6e-25 118.6 102 52.9
C04p52580 Brassica napus HOM05D004230 ORTHO05D007976 3.6e-25 118.6 79 69.6
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 3.6e-25 118.6 102 52.9
BraA10t43214Z Brassica rapa HOM05D004230 ORTHO05D007976 3.6e-25 118.6 102 52.9
BcaB05g23135 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-24 117.1 79 69.6
BcaB06g27526 Brassica carinata HOM05D004230 ORTHO05D007976 1.8e-24 116.3 117 47.9
BcaB07g32504 Brassica carinata HOM05D004230 ORTHO05D007976 3.1e-24 115.5 114 45.6
Sp2g07590 Schrenkiella parvula HOM05D004230 ORTHO05D007976 2.0e-23 112.8 78 65.4
AL8G23470 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 2.6e-23 112.5 100 54.0
BcaC01g03708 Brassica carinata HOM05D004230 ORTHO05D007976 2.6e-23 112.5 79 65.8
BcaC05g25838 Brassica carinata HOM05D004230 ORTHO05D007976 2.6e-23 112.5 79 65.8
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 4.4e-23 111.7 102 51.0
AL7G44480 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 5.8e-23 111.3 97 49.5
BcaC02g09042 Brassica carinata HOM05D004230 ORTHO05D007976 5.8e-23 111.3 79 64.6
BcaC03g15070 Brassica carinata HOM05D004230 ORTHO05D007976 9.8e-23 110.5 79 65.8
BcaB01g00472 Brassica carinata HOM05D004230 ORTHO05D007976 1.3e-22 110.2 79 64.6
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-22 110.2 102 50.0
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 1.3e-22 110.2 102 50.0
Sp3g24280 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.7e-22 109.8 78 64.1
BcaC08g43996 Brassica carinata HOM05D004230 ORTHO05D007976 2.2e-22 109.4 79 63.3
Sp4g02630 Schrenkiella parvula HOM05D004230 ORTHO05D007976 2.2e-22 109.4 87 56.3
BraA03t13046Z Brassica rapa HOM05D004230 ORTHO05D007976 2.9e-22 109.0 98 46.9
BcaC05g28343 Brassica carinata HOM05D004230 ORTHO05D007976 3.7e-22 108.6 79 63.3
C02p19260 Brassica napus HOM05D004230 ORTHO05D007976 6.4e-22 107.8 97 49.5
C07p15900 Brassica napus HOM05D004230 ORTHO05D007976 1.9e-21 106.3 97 49.5
BolC2t08058H Brassica oleracea HOM05D004230 ORTHO05D007976 1.9e-21 106.3 97 49.5
BolC7t42083H Brassica oleracea HOM05D004230 ORTHO05D007976 1.9e-21 106.3 97 49.5
Carub.0007s3044 Capsella rubella HOM05D004230 ORTHO05D007976 4.1e-21 105.1 77 66.2
AT3G32904 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 9.2e-21 104.0 78 61.5
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 9.2e-21 104.0 94 53.2
BraA09t39106Z Brassica rapa HOM05D004230 ORTHO05D007976 9.2e-21 104.0 63 79.4
Carub.0007s3045 Capsella rubella HOM05D004230 ORTHO05D007976 2.7e-20 102.4 77 64.9
BcaC03g18110 Brassica carinata HOM05D004230 ORTHO05D007976 1.3e-19 100.1 88 51.1
C07p28690 Brassica napus HOM05D004230 ORTHO05D007976 3.0e-19 99.0 74 59.5
BolC7t43407H Brassica oleracea HOM05D004230 ORTHO05D007976 3.0e-19 99.0 74 59.5
SpUn0171_0010 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.5e-18 96.7 69 60.9
CARHR102540 Cardamine hirsuta HOM05D004230 ORTHO05D007976 2.1e-17 92.8 88 50.0
CARHR145800 Cardamine hirsuta HOM05D004230 ORTHO05D007976 4.7e-17 91.7 93 50.5
BolC4t25589H Brassica oleracea HOM05D004230 ORTHO05D007976 1.8e-16 89.7 96 46.9
AT5G36080 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 3.1e-16 89.0 77 55.8
Sp5g19020 Schrenkiella parvula HOM05D004230 ORTHO05D007976 6.8e-16 87.8 65 58.5
Sp3g29180 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.5e-15 86.7 77 49.4
Sp4g09110 Schrenkiella parvula HOM05D004230 ORTHO05D000563 1.5e-15 86.7 94 41.5
BolC2t12233H Brassica oleracea HOM05D004230 ORTHO05D007976 3.7e-14 82.0 74 50.0
BcaC01g00380 Brassica carinata HOM05D004230 ORTHO05D007976 6.4e-14 81.3 80 43.8
Carub.0007s3042 Capsella rubella HOM05D004230 ORTHO05D007976 4.6e-12 75.1 78 48.7
CARHR113870 Cardamine hirsuta HOM05D004230 ORTHO05D007976 1.0e-11 73.9 61 55.7
CARHR034450 Cardamine hirsuta HOM05D004230 ORTHO05D007976 1.3e-11 73.6 52 57.7
A03p63250 Brassica napus HOM05D004230 ORTHO05D007976 3.0e-11 72.4 37 86.5
BolC3t20148H Brassica oleracea HOM05D004230 ORTHO05D007976 3.9e-11 72.0 69 50.7
THA.LOC104819338 Tarenaya hassleriana HOM05D004230 ORTHO05D014126 1.5e-10 70.1 106 33.0
A01p37400 Brassica napus HOM05D004230 ORTHO05D021768 3.6e-09 65.5 63 44.4
BolC2t07759H Brassica oleracea HOM05D006735 ORTHO05D009558 1.1e-08 63.9 97 37.1
BolC9t53784H Brassica oleracea HOM05D010326 ORTHO05D012728 3.1e-08 62.4 108 31.5
C07p50820 Brassica napus HOM05D010326 ORTHO05D012728 4.0e-08 62.0 108 31.5
BraA05t19380Z Brassica rapa HOM05D012682 ORTHO05D014126 5.2e-08 61.6 95 32.6
BcaC09g49286 Brassica carinata HOM05D004230 ORTHO05D007976 2.0e-07 59.7 39 71.8
A03p38990 Brassica napus HOM05D004230 ORTHO05D007976 2.6e-07 59.3 98 29.6
A06p20520 Brassica napus HOM05D004230 ORTHO05D007976 2.6e-07 59.3 98 29.6
C01p41060 Brassica napus HOM05D004230 ORTHO05D021768 7.6e-07 57.8 66 43.9
BcaC06g36145 Brassica carinata HOM05D012682 ORTHO05D014126 2.2e-06 56.2 98 30.6
A05p40380 Brassica napus HOM05D006735 ORTHO05D009558 3.8e-06 55.5 115 27.8
BolC5t31791H Brassica oleracea HOM05D006735 ORTHO05D009558 4.9e-06 55.1 102 29.4
BraA09t36761Z Brassica rapa HOM05D006735 ORTHO05D009558 4.9e-06 55.1 103 30.1
Carub.0011s0008 Capsella rubella HOM05D010326 ORTHO05D012728 4.9e-06 55.1 95 31.6
C05p42930 Brassica napus HOM05D006735 ORTHO05D009558 8.4e-06 54.3 124 27.4
THA.LOC104818562 Tarenaya hassleriana HOM05D010326 ORTHO05D000285 8.4e-06 54.3 95 28.4


User provided reference genes

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