Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49279 Brassica carinata HOM05D019709 ORTHO05D032954 1.3e-105 386.3 190 100.0
C01p40610 Brassica napus HOM05D019709 ORTHO05D032954 1.9e-59 233.0 140 86.4
C05p49240 Brassica napus HOM05D019709 ORTHO05D001800 2.2e-23 113.2 191 44.0
BolC1t04014H Brassica oleracea HOM05D019709 ORTHO05D032954 1.8e-22 110.2 67 86.6
BcaC05g28819 Brassica carinata HOM05D019709 ORTHO05D001800 2.0e-21 106.7 193 43.0
C04p44370 Brassica napus HOM05D019709 ORTHO05D096972 2.6e-08 63.2 71 50.7
Sp1g27280 Schrenkiella parvula HOM05D004101 ORTHO05D005221 3.7e-07 59.3 55 56.4
Carub.0001s2990 Capsella rubella HOM05D004101 ORTHO05D005221 4.8e-07 58.9 55 56.4
AL1G49570 Arabidopsis lyrata HOM05D004101 ORTHO05D005221 1.1e-06 57.8 55 54.5
AL8G33780 Arabidopsis lyrata HOM05D001854 ORTHO05D001800 1.8e-06 57.0 127 33.1
AT1G31480 Arabidopsis thaliana HOM05D004101 ORTHO05D005221 2.4e-06 56.6 51 58.8
BcaB02g08122 Brassica carinata HOM05D001854 ORTHO05D001800 2.4e-06 56.6 67 56.7
Carub.0008s1825 Capsella rubella HOM05D001854 ORTHO05D001800 2.4e-06 56.6 127 32.3
CARHR287040 Cardamine hirsuta HOM05D004101 ORTHO05D005221 2.4e-06 56.6 55 54.5
Sp6g19420 Schrenkiella parvula HOM05D001854 ORTHO05D001800 4.1e-06 55.8 127 32.3
BcaB05g22371 Brassica carinata HOM05D001854 ORTHO05D001800 5.3e-06 55.5 27 92.6
BcaC05g27051 Brassica carinata HOM05D004101 ORTHO05D027158 5.3e-06 55.5 64 48.4
A02p08230 Brassica napus HOM05D001854 ORTHO05D001800 5.3e-06 55.5 27 92.6
A02p08240 Brassica napus HOM05D001854 ORTHO05D001800 5.3e-06 55.5 27 92.6
BolC2t07511H Brassica oleracea HOM05D001854 ORTHO05D001800 5.3e-06 55.5 27 92.6
BraA02t05895Z Brassica rapa HOM05D001854 ORTHO05D001800 5.3e-06 55.5 27 92.6
BcaC05g27176 Brassica carinata HOM05D004101 ORTHO05D005221 7.0e-06 55.1 55 54.5
C05p30730 Brassica napus HOM05D004101 ORTHO05D005221 7.0e-06 55.1 55 54.5
BolC5t31805H Brassica oleracea HOM05D004101 ORTHO05D005221 7.0e-06 55.1 55 54.5
BraA09t39007Z Brassica rapa HOM05D004101 ORTHO05D005221 7.0e-06 55.1 55 54.5
BcaB05g23625 Brassica carinata HOM05D000526 ORTHO05D015983 9.1e-06 54.7 152 34.2
Thhalv10013312m.g Eutrema salsugineum HOM05D001854 ORTHO05D001800 9.1e-06 54.7 209 28.7


User provided reference genes

Program Settings