Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49195 Brassica carinata HOM05D001224 ORTHO05D003542 1.1e-50 203.0 99 100.0
A01p26300 Brassica napus HOM05D001224 ORTHO05D003542 3.2e-26 121.7 96 68.8
BcaC06g35970 Brassica carinata HOM05D001224 ORTHO05D003542 2.0e-25 119.0 59 98.3
A10p06600 Brassica napus HOM05D001224 ORTHO05D003542 7.8e-25 117.1 59 94.9
BcaC06g35692 Brassica carinata HOM05D001224 ORTHO05D003542 3.9e-24 114.8 59 94.9
A10p06840 Brassica napus HOM05D001224 ORTHO05D003542 3.9e-24 114.8 59 94.9
C05p36110 Brassica napus HOM05D001224 ORTHO05D003542 3.9e-24 114.8 59 94.9
C07p01200 Brassica napus HOM05D001224 ORTHO05D003542 3.9e-24 114.8 59 94.9
BraA09t40148Z Brassica rapa HOM05D001224 ORTHO05D003542 3.9e-24 114.8 59 94.9
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 6.6e-24 114.0 66 86.4
C07p01160 Brassica napus HOM05D001224 ORTHO05D003542 8.6e-24 113.6 59 93.2
BolC6t36796H Brassica oleracea HOM05D001224 ORTHO05D003542 2.5e-23 112.1 59 91.5
C04p47860 Brassica napus HOM05D001224 ORTHO05D003542 3.3e-23 111.7 59 91.5
C05p42040 Brassica napus HOM05D001224 ORTHO05D003542 3.3e-23 111.7 59 91.5
BolC1t03177H Brassica oleracea HOM05D001224 ORTHO05D003542 3.3e-23 111.7 59 91.5
A05p28400 Brassica napus HOM05D001224 ORTHO05D003542 4.3e-23 111.3 59 91.5
C07p06930 Brassica napus HOM05D001224 ORTHO05D003542 4.3e-23 111.3 59 91.5
BolC8t49591H Brassica oleracea HOM05D001224 ORTHO05D003542 4.3e-23 111.3 59 91.5
BcaC02g12295 Brassica carinata HOM05D001224 ORTHO05D003542 5.6e-23 110.9 59 91.5
BcaC09g48602 Brassica carinata HOM05D001224 ORTHO05D001170 7.3e-23 110.5 59 89.8
BcaC09g48839 Brassica carinata HOM05D001224 ORTHO05D003542 7.3e-23 110.5 59 89.8
A10p08840 Brassica napus HOM05D001224 ORTHO05D003542 7.3e-23 110.5 59 91.5
BolC1t04761H Brassica oleracea HOM05D001224 ORTHO05D003542 7.3e-23 110.5 59 89.8
A08p08840 Brassica napus HOM05D001224 ORTHO05D003542 9.5e-23 110.2 59 91.5
BcaC02g09035 Brassica carinata HOM05D001224 ORTHO05D003542 1.2e-22 109.8 55 96.4
BcaC05g27785 Brassica carinata HOM05D001224 ORTHO05D003542 1.6e-22 109.4 59 89.8
A08p09550 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-22 109.4 59 91.5
C05p37790 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-22 109.4 59 89.8
BraA08t32952Z Brassica rapa HOM05D001224 ORTHO05D003542 1.6e-22 109.4 59 91.5
C05p18360 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-22 109.0 59 91.5
A01p25430 Brassica napus HOM05D001224 ORTHO05D003542 2.8e-22 108.6 59 89.8
BolC5t32335H Brassica oleracea HOM05D001224 ORTHO05D003542 3.6e-22 108.2 59 89.8
A03p54390 Brassica napus HOM05D001224 ORTHO05D003542 4.7e-22 107.8 59 89.8
BolC7t41112H Brassica oleracea HOM05D001224 ORTHO05D003542 4.7e-22 107.8 67 80.6
BraSC37t46117Z Brassica rapa HOM05D001224 ORTHO05D003542 6.2e-22 107.5 59 89.8
C05p45400 Brassica napus HOM05D001224 ORTHO05D003542 8.0e-22 107.1 59 91.5
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 8.0e-22 107.1 59 88.1
BolC3t20360H Brassica oleracea HOM05D001224 ORTHO05D003542 2.3e-21 105.5 59 88.1
BcaC05g28453 Brassica carinata HOM05D001224 ORTHO05D003542 3.1e-21 105.1 59 88.1
BraA03t14504Z Brassica rapa HOM05D001224 ORTHO05D003542 4.0e-21 104.8 59 88.1
BcaB07g33940 Brassica carinata HOM05D001224 ORTHO05D003542 5.2e-21 104.4 60 83.3
C06p04840 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-20 103.2 59 88.1
A01p28550 Brassica napus HOM05D001224 ORTHO05D003542 2.6e-20 102.1 54 90.7
BcaC05g28168 Brassica carinata HOM05D001224 ORTHO05D003542 7.5e-20 100.5 67 77.6
BraA01t03047Z Brassica rapa HOM05D001224 ORTHO05D003542 9.8e-20 100.1 54 88.9
C07p38500 Brassica napus HOM05D001224 ORTHO05D003542 1.9e-18 95.9 67 67.2
BcaC05g27626 Brassica carinata HOM05D001224 ORTHO05D003542 2.4e-18 95.5 96 60.4
BcaC05g27627 Brassica carinata HOM05D001224 ORTHO05D003542 2.4e-18 95.5 96 60.4
BcaB06g27272 Brassica carinata HOM05D001224 ORTHO05D003542 7.0e-18 94.0 58 75.9
BcaB06g26726 Brassica carinata HOM05D001224 ORTHO05D003542 1.6e-17 92.8 57 75.4
BcaB07g33216 Brassica carinata HOM05D001224 ORTHO05D003542 1.6e-17 92.8 57 75.4
BcaB01g01308 Brassica carinata HOM05D001224 ORTHO05D003542 3.5e-17 91.7 58 74.1
BolC4t23824H Brassica oleracea HOM05D001224 ORTHO05D003542 4.6e-17 91.3 59 76.3
BraA09t38882Z Brassica rapa HOM05D001224 ORTHO05D003542 7.8e-17 90.5 69 62.3
BcaB03g16496 Brassica carinata HOM05D001224 ORTHO05D003542 1.0e-16 90.1 57 73.7
C09p28480 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-16 89.7 68 64.7
BcaB04g17427 Brassica carinata HOM05D001224 ORTHO05D003542 1.7e-16 89.4 58 75.9
BolC3t18885H Brassica oleracea HOM05D001224 ORTHO05D003542 1.7e-16 89.4 60 73.3
C04p09750 Brassica napus HOM05D001224 ORTHO05D003542 2.3e-16 89.0 59 74.6
BolC4t22583H Brassica oleracea HOM05D001224 ORTHO05D003542 2.3e-16 89.0 59 74.6
C06p05150 Brassica napus HOM05D001224 ORTHO05D003542 3.0e-16 88.6 58 74.1
C07p30720 Brassica napus HOM05D001224 ORTHO05D003542 3.0e-16 88.6 58 70.7
C04p20870 Brassica napus HOM05D001224 ORTHO05D003542 6.6e-16 87.4 59 72.9
C09p42280 Brassica napus HOM05D001224 ORTHO05D003542 6.6e-16 87.4 59 72.9
BolC9t57106H Brassica oleracea HOM05D001224 ORTHO05D003542 6.6e-16 87.4 59 72.9
A01p20520 Brassica napus HOM05D001224 ORTHO05D003542 8.6e-16 87.0 58 69.0
A03p65930 Brassica napus HOM05D001224 ORTHO05D003542 8.6e-16 87.0 58 69.0
A08p09950 Brassica napus HOM05D001224 ORTHO05D003542 8.6e-16 87.0 58 69.0
A09p33390 Brassica napus HOM05D001224 ORTHO05D003542 8.6e-16 87.0 58 69.0
C01p38780 Brassica napus HOM05D001224 ORTHO05D003542 8.6e-16 87.0 59 72.9
BolC1t03835H Brassica oleracea HOM05D001224 ORTHO05D003542 8.6e-16 87.0 59 72.9
BraA01t03049Z Brassica rapa HOM05D001224 ORTHO05D003542 8.6e-16 87.0 58 69.0
BraA07t28348Z Brassica rapa HOM05D001224 ORTHO05D003542 8.6e-16 87.0 58 69.0
BraA08t32989Z Brassica rapa HOM05D001224 ORTHO05D003542 8.6e-16 87.0 58 69.0
BcaC05g25873 Brassica carinata HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
BcaC09g48966 Brassica carinata HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
A03p54410 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C01p30530 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C01p44930 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C02p53510 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C03p65990 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C04p21370 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C05p34940 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C07p49100 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C08p06680 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C08p08880 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C09p16570 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C09p19450 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C09p21160 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C09p27480 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
BolC3t18859H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
BolC6t36240H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
BolC6t36735H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
BolC9t55018H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
BolC9t57316H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-15 86.7 58 69.0
C04p41850 Brassica napus HOM05D001224 ORTHO05D003542 1.5e-15 86.3 58 69.0
BraA10t42919Z Brassica rapa HOM05D001224 ORTHO05D003542 1.5e-15 86.3 58 67.2
C07p05290 Brassica napus HOM05D001224 ORTHO05D003542 1.9e-15 85.9 59 71.2
BolC7t40929H Brassica oleracea HOM05D001224 ORTHO05D003542 1.9e-15 85.9 59 71.2
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 3.3e-15 85.1 57 66.7
BcaC05g27630 Brassica carinata HOM05D001224 ORTHO05D001170 3.3e-15 85.1 91 56.0
C02p39450 Brassica napus HOM05D001224 ORTHO05D003542 3.3e-15 85.1 59 71.2
C05p44750 Brassica napus HOM05D001224 ORTHO05D003542 3.3e-15 85.1 58 67.2
BolC2t09958H Brassica oleracea HOM05D001224 ORTHO05D003542 3.3e-15 85.1 59 71.2
A06p28380 Brassica napus HOM05D001224 ORTHO05D003542 5.6e-15 84.3 59 69.5
A07p02040 Brassica napus HOM05D001224 ORTHO05D003542 5.6e-15 84.3 58 67.2
BolC6t38483H Brassica oleracea HOM05D001224 ORTHO05D003542 5.6e-15 84.3 59 71.2
BraA06t25781Z Brassica rapa HOM05D001224 ORTHO05D003542 5.6e-15 84.3 59 69.5
BcaC08g44372 Brassica carinata HOM05D001224 ORTHO05D003542 9.5e-15 83.6 64 62.5
C03p75870 Brassica napus HOM05D001224 ORTHO05D003542 9.5e-15 83.6 58 65.5
BolC3t19483H Brassica oleracea HOM05D001224 ORTHO05D003542 9.5e-15 83.6 58 67.2
BcaC02g09113 Brassica carinata HOM05D001224 ORTHO05D003542 1.2e-14 83.2 58 65.5
C01p38690 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-14 82.8 58 67.2
BraA03t14506Z Brassica rapa HOM05D001224 ORTHO05D003542 1.6e-14 82.8 58 67.2
BolC3t17910H Brassica oleracea HOM05D001224 ORTHO05D003542 4.7e-14 81.3 58 63.8
BolC7t43617H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-13 80.1 61 65.6
BraA10t42920Z Brassica rapa HOM05D001224 ORTHO05D003542 2.3e-13 79.0 61 70.5
BcaC08g43734 Brassica carinata HOM05D001224 ORTHO05D003542 3.1e-13 78.6 61 57.4
C07p07600 Brassica napus HOM05D001224 ORTHO05D003542 4.0e-13 78.2 58 70.7
BolC7t41181H Brassica oleracea HOM05D001224 ORTHO05D003542 4.0e-13 78.2 58 70.7
BcaB07g32746 Brassica carinata HOM05D001224 ORTHO05D003542 5.2e-13 77.8 58 60.3
C07p01240 Brassica napus HOM05D001224 ORTHO05D003542 6.8e-13 77.4 58 60.3
BcaB01g01478 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-12 76.3 58 62.1
BcaC06g36118 Brassica carinata HOM05D001224 ORTHO05D003542 2.0e-12 75.9 58 69.0
C03p71060 Brassica napus HOM05D001224 ORTHO05D003542 2.0e-12 75.9 54 64.8
BolC3t19389H Brassica oleracea HOM05D001224 ORTHO05D003542 2.0e-12 75.9 54 64.8
BcaC06g36232 Brassica carinata HOM05D001224 ORTHO05D003542 2.6e-12 75.5 60 58.3
C07p06200 Brassica napus HOM05D001224 ORTHO05D003542 2.6e-12 75.5 60 58.3
BolC7t41037H Brassica oleracea HOM05D001224 ORTHO05D003542 2.6e-12 75.5 60 58.3
BcaC07g39107 Brassica carinata HOM05D001224 ORTHO05D003542 4.4e-12 74.7 55 63.6
C04p09860 Brassica napus HOM05D001224 ORTHO05D003542 7.5e-12 73.9 59 66.1
BolC4t22594H Brassica oleracea HOM05D001224 ORTHO05D003542 7.5e-12 73.9 59 66.1
BcaC06g36018 Brassica carinata HOM05D001224 ORTHO05D003542 9.9e-12 73.6 57 59.6
BcaC08g44057 Brassica carinata HOM05D001224 ORTHO05D003542 1.3e-11 73.2 58 62.1
BolC7t41036H Brassica oleracea HOM05D001224 ORTHO05D003542 1.7e-11 72.8 56 62.5
BcaB06g27858 Brassica carinata HOM05D001224 ORTHO05D003542 2.2e-11 72.4 44 79.5
BcaB07g33138 Brassica carinata HOM05D001224 ORTHO05D003542 2.9e-11 72.0 59 54.2
BcaC05g26485 Brassica carinata HOM05D001224 ORTHO05D003542 2.9e-11 72.0 50 66.0
BolC4t22584H Brassica oleracea HOM05D001224 ORTHO05D003542 4.9e-11 71.2 60 58.3
BolC9t57424H Brassica oleracea HOM05D001224 ORTHO05D003542 4.9e-11 71.2 54 61.1
C05p25310 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-10 68.9 60 53.3
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 3.2e-10 68.6 59 64.4
A01p26690 Brassica napus HOM05D001224 ORTHO05D003542 4.1e-10 68.2 56 55.4
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 7.1e-10 67.4 59 62.7
C04p05510 Brassica napus HOM05D001224 ORTHO05D003542 9.2e-10 67.0 59 62.7
BolC4t23825H Brassica oleracea HOM05D001224 ORTHO05D003542 1.2e-09 66.6 60 55.0
C03p58290 Brassica napus HOM05D001224 ORTHO05D003542 2.7e-09 65.5 59 61.0
BolC4t26386H Brassica oleracea HOM05D001224 ORTHO05D003542 2.7e-09 65.5 59 61.0
BolC9t59177H Brassica oleracea HOM05D001224 ORTHO05D003542 2.7e-09 65.5 59 61.0
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 6.0e-09 64.3 59 61.0
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 6.0e-09 64.3 59 59.3
BolC5t33263H Brassica oleracea HOM05D001224 ORTHO05D003542 6.0e-09 64.3 59 61.0
BcaB02g11188 Brassica carinata HOM05D001224 ORTHO05D003542 1.7e-08 62.8 60 50.0
C04p09870 Brassica napus HOM05D001224 ORTHO05D003542 2.3e-08 62.4 45 62.2
C04p56100 Brassica napus HOM05D001224 ORTHO05D003542 2.3e-08 62.4 47 61.7
BolC4t22595H Brassica oleracea HOM05D001224 ORTHO05D003542 2.3e-08 62.4 45 62.2
BraA07t28539Z Brassica rapa HOM05D001224 ORTHO05D003542 8.6e-08 60.5 50 56.0
BolC7t45418H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-07 60.1 39 69.2
C07p08890 Brassica napus HOM05D001224 ORTHO05D003542 1.5e-07 59.7 39 66.7
BolC3t18910H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-07 59.7 45 55.6
BolC7t41301H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-07 59.7 39 66.7
BolC4t25126H Brassica oleracea HOM05D001224 ORTHO05D003542 1.9e-07 59.3 58 51.7
BcaC02g11931 Brassica carinata HOM05D001224 ORTHO05D003542 7.3e-07 57.4 39 69.2
C01p45370 Brassica napus HOM05D001224 ORTHO05D001170 9.5e-07 57.0 28 92.9
BcaC02g09777 Brassica carinata HOM05D001224 ORTHO05D003542 2.1e-06 55.8 41 63.4


User provided reference genes

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