Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49192 Brassica carinata HOM05D000003 ORTHO05D011072 6.4e-54 213.8 104 100.0
BolC1t04115H Brassica oleracea HOM05D000003 ORTHO05D011072 6.4e-54 213.8 104 100.0
BraA09t37725Z Brassica rapa HOM05D000003 ORTHO05D011072 7.9e-36 153.7 97 81.4
BolC2t10036H Brassica oleracea HOM05D000003 ORTHO05D011072 5.0e-22 107.8 102 52.0
BolC1t03134H Brassica oleracea HOM05D000003 ORTHO05D011072 1.9e-21 105.9 102 52.0
BraA01t03377Z Brassica rapa HOM05D000003 ORTHO05D011072 9.3e-21 103.6 59 84.7
BraA01t02310Z Brassica rapa HOM05D012406 ORTHO05D011072 3.5e-20 101.7 100 50.0
BcaC02g11896 Brassica carinata HOM05D000003 ORTHO05D032862 7.4e-18 94.0 78 61.5
BraA05t21220Z Brassica rapa HOM05D000003 ORTHO05D011072 6.9e-16 87.4 73 58.9
C01p30650 Brassica napus HOM05D012406 ORTHO05D011072 2.2e-14 82.4 85 48.2
BraA09t37875Z Brassica rapa HOM05D000003 ORTHO05D000004 5.0e-14 81.3 101 41.6
AL5G25040 Arabidopsis lyrata HOM05D000003 ORTHO05D011072 1.1e-13 80.1 97 42.3
C08p24180 Brassica napus HOM05D000003 ORTHO05D011072 1.1e-13 80.1 104 43.3
BolC9t56388H Brassica oleracea HOM05D000003 ORTHO05D011072 1.1e-13 80.1 100 40.0
BolC4t24203H Brassica oleracea HOM05D000003 ORTHO05D011072 1.9e-13 79.3 99 42.4
C07p08580 Brassica napus HOM05D000003 ORTHO05D011072 9.4e-13 77.0 103 39.8
BolC4t24374H Brassica oleracea HOM05D000003 ORTHO05D011072 9.4e-13 77.0 73 52.1
BolC5t30919H Brassica oleracea HOM05D000003 ORTHO05D011072 1.6e-12 76.3 98 41.8
BolC9t59539H Brassica oleracea HOM05D000003 ORTHO05D000283 3.6e-12 75.1 100 40.0
BolC3t15436H Brassica oleracea HOM05D000003 ORTHO05D032862 4.6e-12 74.7 54 63.0
BolC9t54936H Brassica oleracea HOM05D012406 ORTHO05D000283 4.6e-12 74.7 84 46.4
BolC9t55722H Brassica oleracea HOM05D000003 ORTHO05D000283 4.6e-12 74.7 100 41.0
BolC4t28361H Brassica oleracea HOM05D000003 ORTHO05D000283 6.1e-12 74.3 102 33.3
Carub.0002s0955 Capsella rubella HOM05D000003 ORTHO05D011072 2.3e-11 72.4 100 37.0
BolC4t22334H Brassica oleracea HOM05D000003 ORTHO05D011072 3.0e-11 72.0 100 37.0
BraA01t02762Z Brassica rapa HOM05D000003 ORTHO05D000283 3.0e-11 72.0 100 37.0
BraA02t05728Z Brassica rapa HOM05D000003 ORTHO05D000283 3.0e-11 72.0 59 54.2
AL3G45200 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 3.9e-11 71.6 100 37.0
Carub.0001s3394 Capsella rubella HOM05D000003 ORTHO05D000283 3.9e-11 71.6 95 38.9
BolC2t07267H Brassica oleracea HOM05D038963 ORTHO05D000283 8.8e-11 70.5 78 44.9
BolC3t20242H Brassica oleracea HOM05D000003 ORTHO05D011072 2.5e-10 68.9 100 37.0
BraSC36t46089Z Brassica rapa HOM05D000003 ORTHO05D011072 7.4e-10 67.4 61 52.5
C07p16410 Brassica napus HOM05D000003 ORTHO05D000283 1.7e-09 66.2 97 36.1
BolC2t10942H Brassica oleracea HOM05D000003 ORTHO05D011072 1.7e-09 66.2 74 44.6
BolC7t42137H Brassica oleracea HOM05D000003 ORTHO05D000283 1.7e-09 66.2 97 36.1
BolC5t29572H Brassica oleracea HOM05D012406 ORTHO05D000283 2.2e-09 65.9 96 42.7
BolC7t40895H Brassica oleracea HOM05D000003 ORTHO05D011072 3.7e-09 65.1 74 44.6
BcaC08g44386 Brassica carinata HOM05D000003 ORTHO05D000283 4.8e-09 64.7 100 37.0
BolC6t37448H Brassica oleracea HOM05D000003 ORTHO05D011072 6.3e-09 64.3 79 44.3
BolC5t32500H Brassica oleracea HOM05D000003 ORTHO05D011072 1.8e-08 62.8 100 38.0
BolC5t32160H Brassica oleracea HOM05D000003 ORTHO05D000283 4.1e-08 61.6 102 35.3
BcaC06g36335 Brassica carinata HOM05D000003 ORTHO05D011072 6.9e-08 60.8 66 45.5
BolC9t56590H Brassica oleracea HOM05D000003 ORTHO05D023861 6.9e-08 60.8 85 38.8
BcaB04g19491 Brassica carinata HOM05D000003 ORTHO05D014527 1.5e-07 59.7 91 37.4
BolC6t39459H Brassica oleracea HOM05D000003 ORTHO05D011072 1.5e-07 59.7 79 41.8
BolC1t01970H Brassica oleracea HOM05D000003 ORTHO05D000283 2.6e-07 58.9 100 33.0
BcaC03g16938 Brassica carinata HOM05D000003 ORTHO05D011072 3.4e-07 58.5 65 46.2
BolC3t17755H Brassica oleracea HOM05D000003 ORTHO05D011072 3.4e-07 58.5 55 52.7
BolC8t48016H Brassica oleracea HOM05D033127 ORTHO05D033503 4.5e-07 58.2 51 49.0
AL5G25560 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 7.7e-07 57.4 91 34.1
BcaC03g15593 Brassica carinata HOM05D000003 ORTHO05D000283 7.7e-07 57.4 95 32.6
BolC2t07181H Brassica oleracea HOM05D000003 ORTHO05D000283 7.7e-07 57.4 94 35.1
BraA07t28299Z Brassica rapa HOM05D000003 ORTHO05D000283 7.7e-07 57.4 98 34.7
BolC2t12335H Brassica oleracea HOM05D000003 ORTHO05D011072 1.3e-06 56.6 72 41.7
Carub.0005s0074 Capsella rubella HOM05D000003 ORTHO05D014527 1.7e-06 56.2 95 31.6
Carub.0008s0662 Capsella rubella HOM05D000003 ORTHO05D011072 1.7e-06 56.2 73 39.7
BolC2t07536H Brassica oleracea HOM05D000003 ORTHO05D000283 2.2e-06 55.8 85 34.1
BolC8t47371H Brassica oleracea HOM05D033127 ORTHO05D033503 2.2e-06 55.8 51 47.1
Carub.0005s1491 Capsella rubella HOM05D000003 ORTHO05D014527 2.9e-06 55.5 95 31.6
Carub.0006s2474 Capsella rubella HOM05D000003 ORTHO05D011072 2.9e-06 55.5 59 50.8


User provided reference genes

Program Settings