Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49104 Brassica carinata HOM05D003806 ORTHO05D004346 9.7e-48 193.4 112 100.0
AT2G32240 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 1.7e-31 139.4 109 74.3
Carub.0004s1356 Capsella rubella HOM05D003806 ORTHO05D004346 6.3e-31 137.5 109 73.4
AL4G27610 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 1.4e-30 136.3 109 72.5
Thhalv10016148m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 9.1e-30 133.7 109 73.4
CARHR126030 Cardamine hirsuta HOM05D003806 ORTHO05D004346 7.7e-29 130.6 108 70.4
C01p42510 Brassica napus HOM05D003806 ORTHO05D004346 3.8e-28 128.3 94 79.8
C03p21110 Brassica napus HOM05D003806 ORTHO05D004346 3.8e-28 128.3 107 72.9
BolC3t14493H Brassica oleracea HOM05D003806 ORTHO05D004346 3.8e-28 128.3 107 72.9
BcaC01g05916 Brassica carinata HOM05D003806 ORTHO05D004346 8.5e-28 127.1 109 71.6
BcaC02g11341 Brassica carinata HOM05D003806 ORTHO05D001704 9.4e-27 123.6 81 86.4
BraA05t20242Z Brassica rapa HOM05D003806 ORTHO05D004346 1.2e-26 123.2 79 89.9
C04p17390 Brassica napus HOM05D003806 ORTHO05D004346 3.6e-26 121.7 80 86.2
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 3.6e-26 121.7 80 86.2
A05p13020 Brassica napus HOM05D003806 ORTHO05D004346 8.0e-26 120.6 79 88.6
Sp4g14610 Schrenkiella parvula HOM05D003806 ORTHO05D004346 1.0e-20 103.6 79 77.2
A03p18080 Brassica napus HOM05D003806 ORTHO05D004346 2.3e-17 92.4 95 65.3
BolC5t29142H Brassica oleracea HOM05D003806 ORTHO05D004346 4.0e-17 91.7 109 56.9
Thhalv10006865m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 1.2e-16 90.1 104 57.7
C05p03650 Brassica napus HOM05D003806 ORTHO05D004346 1.5e-16 89.7 109 56.0
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 7.5e-16 87.4 109 48.6
A10p04030 Brassica napus HOM05D003806 ORTHO05D004346 2.4e-14 82.4 109 53.2
BraA10t42674Z Brassica rapa HOM05D003806 ORTHO05D004346 2.4e-14 82.4 109 53.2
BolC8t52706H Brassica oleracea HOM05D003806 ORTHO05D004346 9.1e-14 80.5 109 53.2
Aa31LG5G4290 Aethionema arabicum HOM05D003806 ORTHO05D004346 2.0e-13 79.3 95 54.7
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 2.0e-13 79.3 110 50.0
C08p51770 Brassica napus HOM05D003806 ORTHO05D004346 2.7e-13 79.0 109 52.3
BraA03t11067Z Brassica rapa HOM05D003806 ORTHO05D004346 3.5e-13 78.6 75 65.3
BcaC07g42136 Brassica carinata HOM05D003806 ORTHO05D004346 5.9e-13 77.8 111 50.5
AT1G05320 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 1.0e-12 77.0 109 50.5
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 2.2e-12 75.9 110 49.1
Atru.chr8.989 Acer truncatum HOM05D003806 ORTHO05D004346 4.2e-11 71.6 110 41.8
THA.LOC104800972 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 1.2e-10 70.1 74 60.8
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.8e-09 66.2 95 43.2
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 2.3e-09 65.9 105 44.8
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 2.3e-09 65.9 103 41.7
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 3.0e-09 65.5 106 42.5
PSO541G2929 Papaver somniferum HOM05D003806 ORTHO05D004346 8.8e-09 63.9 106 40.6
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 1.5e-08 63.2 105 43.8
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 2.0e-08 62.8 86 44.2
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 2.0e-08 62.8 104 41.3
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 2.0e-08 62.8 104 41.3
THA.LOC104816049 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 2.0e-08 62.8 64 62.5
TAR624G1065 Trochodendron aralioides HOM05D003806 ORTHO05D004346 2.0e-08 62.8 104 39.4
PSO675G3405 Papaver somniferum HOM05D003806 ORTHO05D004346 2.6e-08 62.4 110 39.1
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 3.4e-08 62.0 103 38.8
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 4.4e-08 61.6 85 48.2
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 4.4e-08 61.6 103 41.7
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 4.4e-08 61.6 103 43.7
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 4.4e-08 61.6 86 44.2
Sabra06G0015000 Salix brachista HOM05D003806 ORTHO05D004346 4.4e-08 61.6 81 49.4
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 7.5e-08 60.8 110 38.2
SGA_v2.0_scaffold73G24430 Striga asiatica HOM05D003806 ORTHO05D004346 4.8e-07 58.2 82 41.5
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 8.3e-07 57.4 83 45.8
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 1.1e-06 57.0 82 46.3
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 1.8e-06 56.2 78 47.4
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 1.8e-06 56.2 106 38.7
CDE05G0051 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 2.4e-06 55.8 107 36.4
MELO3C016203.2 Cucumis melo HOM05D003806 ORTHO05D004346 3.1e-06 55.5 103 40.8
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 3.1e-06 55.5 103 40.8
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 3.1e-06 55.5 103 37.9
TWI60G0662 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 3.1e-06 55.5 82 41.5
Carub.0001s0463 Capsella rubella HOM05D003806 ORTHO05D004346 4.1e-06 55.1 69 50.7
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 4.1e-06 55.1 110 40.0
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 4.1e-06 55.1 106 37.7
A09p67490 Brassica napus HOM05D003806 ORTHO05D004346 5.4e-06 54.7 72 50.0
BraA09t42077Z Brassica rapa HOM05D003806 ORTHO05D004346 5.4e-06 54.7 72 50.0
CANSAT64G1938 Cannabis sativa HOM05D003806 ORTHO05D004346 5.4e-06 54.7 104 37.5
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 7.0e-06 54.3 106 36.8
TPR.G21252 Trifolium pratense HOM05D003806 ORTHO05D004346 9.1e-06 53.9 105 37.1


User provided reference genes

Program Settings