Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49023 Brassica carinata HOM05D006289 ORTHO05D018698 1.1e-234 816.2 395 100.0
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 2.4e-69 266.9 136 97.8
BolC9t58083H Brassica oleracea HOM05D006289 ORTHO05D018698 2.0e-55 220.7 205 59.0
C03p66840 Brassica napus HOM05D006289 ORTHO05D017568 2.2e-54 217.2 205 62.0
BcaC01g02303 Brassica carinata HOM05D006289 ORTHO05D018698 3.9e-51 206.5 109 92.7
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 1.1e-45 188.3 219 49.3
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 5.4e-45 186.0 229 46.3
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 1.6e-44 184.5 209 49.8
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 7.8e-44 182.2 229 46.3
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 1.9e-42 177.6 218 46.8
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 3.3e-42 176.8 151 60.3
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 1.7e-38 164.5 214 43.9
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 7.1e-37 159.1 148 52.7
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 9.3e-37 158.7 179 45.8
C05p37190 Brassica napus HOM05D005627 ORTHO05D024275 1.3e-35 154.8 143 52.4
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 2.3e-35 154.1 145 52.4
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 2.3e-35 154.1 145 52.4
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 1.5e-34 151.4 202 41.6
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 1.9e-34 151.0 141 51.1
BcaB08g34781 Brassica carinata HOM05D005627 ORTHO05D009842 4.3e-34 149.8 142 50.0
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 6.2e-33 146.0 145 45.5
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 1.4e-32 144.8 198 42.9
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 1.4e-32 144.8 198 42.9
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 1.4e-32 144.8 198 42.9
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 4.0e-32 143.3 182 39.6
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 1.5e-31 141.4 187 41.7
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 2.2e-30 137.5 164 40.2
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 2.9e-30 137.1 134 50.0
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 3.8e-30 136.7 143 48.3
BcaB03g16579 Brassica carinata HOM05D006289 ORTHO05D019933 6.4e-30 136.0 167 40.1
C01p43400 Brassica napus HOM05D025394 ORTHO05D018698 6.4e-30 136.0 77 87.0
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 3.2e-29 133.7 160 43.1
BolC9t59378H Brassica oleracea HOM05D006289 ORTHO05D017568 5.5e-29 132.9 140 57.1
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 7.1e-29 132.5 182 37.4
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 1.3e-27 128.3 160 41.2
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 1.3e-27 128.3 160 41.2
C03p66830 Brassica napus HOM05D025394 ORTHO05D018698 1.8e-27 127.9 95 70.5
BolC3t18951H Brassica oleracea HOM05D025394 ORTHO05D018698 3.9e-27 126.7 95 69.5
BcaB06g26983 Brassica carinata HOM05D005627 ORTHO05D039808 5.1e-27 126.3 210 38.1
C02p45470 Brassica napus HOM05D006289 ORTHO05D103884 4.5e-23 113.2 96 60.4
BcaB04g17888 Brassica carinata HOM05D005627 ORTHO05D017568 5.8e-23 112.8 129 42.6
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 1.7e-22 111.3 131 42.7
BcaC04g20743 Brassica carinata HOM05D006289 ORTHO05D027118 2.9e-22 110.5 149 44.3
C09p39660 Brassica napus HOM05D006289 ORTHO05D027118 1.9e-21 107.8 130 39.2
BolC9t56845H Brassica oleracea HOM05D006289 ORTHO05D027118 1.9e-21 107.8 130 39.2
C08p09320 Brassica napus HOM05D006289 ORTHO05D017568 2.5e-21 107.5 107 49.5
C09p12390 Brassica napus HOM05D005627 ORTHO05D032198 1.2e-20 105.1 135 41.5
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 1.3e-19 101.7 133 39.1
BraA07t28778Z Brassica rapa HOM05D025394 ORTHO05D018698 1.3e-19 101.7 67 79.1
BraA06t24709Z Brassica rapa HOM05D025394 ORTHO05D018698 3.9e-19 100.1 67 77.6
BolC2t10570H Brassica oleracea HOM05D006289 ORTHO05D040995 1.9e-18 97.8 196 36.2
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 3.3e-18 97.1 158 36.7
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 3.3e-18 97.1 158 36.7
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 3.3e-18 97.1 158 36.7
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 4.3e-18 96.7 163 35.6
C01p11540 Brassica napus HOM05D005627 ORTHO05D009842 4.3e-18 96.7 64 64.1
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 7.4e-18 95.9 51 88.2
BcaC01g03482 Brassica carinata HOM05D006289 ORTHO05D032299 1.3e-17 95.1 125 43.2
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 1.3e-17 95.1 163 36.2
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 1.3e-17 95.1 137 35.0
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 3.7e-17 93.6 78 57.7
BNapus_Darmor_BZH_scaffold_103p00100 Brassica napus HOM05D005627 ORTHO05D017564 1.1e-16 92.0 78 56.4
BNapus_Darmor_BZH_scaffold_104p00110 Brassica napus HOM05D005627 ORTHO05D017564 1.1e-16 92.0 78 56.4
BraA01t02617Z Brassica rapa HOM05D005627 ORTHO05D017564 1.1e-16 92.0 78 57.7
BraSC36t46108Z Brassica rapa HOM05D005627 ORTHO05D017564 1.1e-16 92.0 78 56.4
BcaC04g19240 Brassica carinata HOM05D006289 ORTHO05D017568 6.9e-16 89.4 125 36.0
C02p45490 Brassica napus HOM05D006289 ORTHO05D039115 5.9e-15 86.3 132 34.8
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 7.7e-15 85.9 67 55.2
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 7.7e-15 85.9 67 55.2
BcaB03g12380 Brassica carinata HOM05D006289 ORTHO05D092672 1.3e-14 85.1 107 47.7
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 1.3e-14 85.1 123 39.8
BcaB03g14785 Brassica carinata HOM05D006289 ORTHO05D009842 1.7e-14 84.7 176 33.0
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 1.4e-13 81.6 116 37.9
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 2.5e-13 80.9 111 39.6
BcaC03g16702 Brassica carinata HOM05D006289 ORTHO05D039115 3.2e-13 80.5 129 31.0
BraA07t28074Z Brassica rapa HOM05D006289 ORTHO05D009842 3.2e-13 80.5 129 34.9
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 5.5e-13 79.7 123 35.0
BraA05t20302Z Brassica rapa HOM05D006289 ORTHO05D027692 5.5e-13 79.7 123 35.0
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 5.5e-13 79.7 117 37.6
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 1.6e-12 78.2 116 34.5
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 1.6e-12 78.2 160 34.4
C03p52020 Brassica napus HOM05D006289 ORTHO05D032299 2.1e-12 77.8 110 40.9
BolC3t17484H Brassica oleracea HOM05D006289 ORTHO05D032299 2.1e-12 77.8 110 40.9
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 2.1e-12 77.8 171 32.2
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 4.6e-12 76.6 116 35.3
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 7.9e-12 75.9 123 34.1
BolC2t11140H Brassica oleracea HOM05D005627 ORTHO05D011976 7.9e-12 75.9 123 34.1
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 1.4e-11 75.1 123 35.8
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 1.4e-11 75.1 123 35.0
C03p74240 Brassica napus HOM05D006289 ORTHO05D028190 1.8e-11 74.7 64 46.9
BolC3t19682H Brassica oleracea HOM05D006289 ORTHO05D028190 1.8e-11 74.7 64 46.9
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 2.3e-11 74.3 116 32.8
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 2.3e-11 74.3 123 35.0
C09p65560 Brassica napus HOM05D006289 ORTHO05D017568 2.3e-11 74.3 69 47.8
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 2.3e-11 74.3 116 32.8
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 3.0e-11 73.9 116 36.2
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 3.9e-11 73.6 111 36.9
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 3.9e-11 73.6 123 34.1
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 3.9e-11 73.6 137 32.8
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 5.1e-11 73.2 116 32.8
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 5.1e-11 73.2 116 33.6
BcaB01g01204 Brassica carinata HOM05D006289 ORTHO05D019882 6.7e-11 72.8 107 34.6
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 6.7e-11 72.8 131 32.1
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 6.7e-11 72.8 131 32.1
BcaC06g35917 Brassica carinata HOM05D005627 ORTHO05D011976 8.8e-11 72.4 123 33.3
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 8.8e-11 72.4 123 33.3
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-10 72.0 64 51.6
C09p42080 Brassica napus HOM05D006289 ORTHO05D016037 1.1e-10 72.0 100 37.0
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-10 72.0 64 51.6
BcaB02g10994 Brassica carinata HOM05D005627 ORTHO05D011976 1.5e-10 71.6 124 33.9
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 1.5e-10 71.6 111 36.0
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 1.5e-10 71.6 103 35.9
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 2.0e-10 71.2 119 32.8
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 3.3e-10 70.5 129 32.6
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 3.3e-10 70.5 129 32.6
BraA07t28776Z Brassica rapa HOM05D005627 ORTHO05D017568 3.3e-10 70.5 66 47.0
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 4.3e-10 70.1 165 29.7
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 4.3e-10 70.1 116 33.6
A06p10200 Brassica napus HOM05D006289 ORTHO05D019882 5.7e-10 69.7 95 42.1
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 5.7e-10 69.7 123 33.3
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 9.7e-10 68.9 116 33.6
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 9.7e-10 68.9 123 32.5
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 9.7e-10 68.9 116 33.6
C02p24040 Brassica napus HOM05D006289 ORTHO05D009842 1.3e-09 68.6 120 32.5
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 1.7e-09 68.2 111 35.1
BcaC06g35675 Brassica carinata HOM05D005627 ORTHO05D011976 1.7e-09 68.2 129 31.8
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 1.7e-09 68.2 120 35.0
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 1.7e-09 68.2 141 31.9
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 2.8e-09 67.4 111 33.3
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 2.8e-09 67.4 119 34.5
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 2.8e-09 67.4 119 34.5
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 2.8e-09 67.4 111 33.3
BcaC05g27731 Brassica carinata HOM05D006289 ORTHO05D024275 4.8e-09 66.6 56 57.1
C09p50140 Brassica napus HOM05D006289 ORTHO05D024275 4.8e-09 66.6 120 36.7
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 4.8e-09 66.6 111 33.3
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 6.3e-09 66.2 123 31.7
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 6.3e-09 66.2 119 34.5
BcaB01g01127 Brassica carinata HOM05D006289 ORTHO05D017564 8.2e-09 65.9 52 48.1
A02p36990 Brassica napus HOM05D000042 ORTHO05D033718 1.1e-08 65.5 104 37.5
BraA02t08686Z Brassica rapa HOM05D000042 ORTHO05D033718 1.1e-08 65.5 104 37.5
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 1.8e-08 64.7 58 50.0
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 2.4e-08 64.3 119 31.1
BraA08t34504Z Brassica rapa HOM05D006289 ORTHO05D039808 2.4e-08 64.3 75 48.0
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 3.1e-08 63.9 140 29.3
BcaC07g37194 Brassica carinata HOM05D005627 ORTHO05D011976 3.1e-08 63.9 123 31.7
BolC7t41167H Brassica oleracea HOM05D005627 ORTHO05D011792 3.1e-08 63.9 109 33.0
BraA06t25653Z Brassica rapa HOM05D005627 ORTHO05D013519 3.1e-08 63.9 119 33.6
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 4.1e-08 63.5 111 32.4
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 4.1e-08 63.5 168 28.0
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 4.1e-08 63.5 111 32.4
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 5.3e-08 63.2 192 28.1
A04p16270 Brassica napus HOM05D006289 ORTHO05D019882 5.3e-08 63.2 90 35.6
A08p09530 Brassica napus HOM05D006289 ORTHO05D019882 5.3e-08 63.2 90 35.6
A10p08780 Brassica napus HOM05D009418 ORTHO05D018626 5.3e-08 63.2 137 28.5
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 5.3e-08 63.2 110 31.8
BraA04t17266Z Brassica rapa HOM05D006289 ORTHO05D019882 5.3e-08 63.2 90 35.6
BraA08t32951Z Brassica rapa HOM05D006289 ORTHO05D019882 5.3e-08 63.2 90 35.6
C08p22740 Brassica napus HOM05D009418 ORTHO05D018626 6.9e-08 62.8 137 27.7
BolC8t49910H Brassica oleracea HOM05D009418 ORTHO05D018626 6.9e-08 62.8 137 27.7
BraSC37t46125Z Brassica rapa HOM05D009418 ORTHO05D018626 6.9e-08 62.8 137 28.5
BcaC08g46023 Brassica carinata HOM05D005627 ORTHO05D011976 9.1e-08 62.4 112 33.0
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 9.1e-08 62.4 203 29.6
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 9.1e-08 62.4 55 52.7
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 1.2e-07 62.0 117 33.3
C08p05920 Brassica napus HOM05D005627 ORTHO05D018690 1.2e-07 62.0 125 30.4
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 1.5e-07 61.6 205 27.3
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 1.5e-07 61.6 136 33.8
C09p65570 Brassica napus HOM05D006289 ORTHO05D096946 1.5e-07 61.6 47 66.0
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 1.5e-07 61.6 136 33.8
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 2.0e-07 61.2 135 27.4
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 2.0e-07 61.2 138 31.9
C09p26130 Brassica napus HOM05D005627 ORTHO05D018690 2.0e-07 61.2 125 30.4
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 2.0e-07 61.2 138 31.9
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-07 60.8 115 33.9
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 2.6e-07 60.8 115 33.9
BraA06t25407Z Brassica rapa HOM05D005627 ORTHO05D018690 2.6e-07 60.8 133 30.1
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 3.4e-07 60.5 116 31.9
BolC2t11142H Brassica oleracea HOM05D005627 ORTHO05D018690 3.4e-07 60.5 133 30.1
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 3.4e-07 60.5 123 34.1
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 5.9e-07 59.7 116 31.9
BolC4t27750H Brassica oleracea HOM05D009418 ORTHO05D018626 5.9e-07 59.7 135 27.4
BcaB08g35417 Brassica carinata HOM05D006289 ORTHO05D024275 7.7e-07 59.3 56 48.2
C07p18300 Brassica napus HOM05D005627 ORTHO05D018690 7.7e-07 59.3 126 29.4
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 1.0e-06 58.9 135 29.6
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 1.3e-06 58.5 122 32.8
BolC6t38918H Brassica oleracea HOM05D005627 ORTHO05D011976 1.3e-06 58.5 113 31.9
BcaC04g21890 Brassica carinata HOM05D005627 ORTHO05D018690 1.7e-06 58.2 125 29.6
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 1.7e-06 58.2 113 31.9
BcaC08g46851 Brassica carinata HOM05D009418 ORTHO05D090315 2.2e-06 57.8 128 32.0
BcaC09g49041 Brassica carinata HOM05D006289 ORTHO05D032439 2.9e-06 57.4 104 29.8
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 5.0e-06 56.6 136 27.9
BraA06t25317Z Brassica rapa HOM05D005627 ORTHO05D013519 5.0e-06 56.6 125 30.4
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 6.5e-06 56.2 118 29.7
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 6.5e-06 56.2 120 32.5


User provided reference genes

Program Settings