Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48989 Brassica carinata HOM05D030859 ORTHO05D000001 1.9e-65 252.3 122 100.0
BcaC06g34903 Brassica carinata HOM05D030859 ORTHO05D000001 6.0e-43 177.6 115 74.8
BcaC01g00635 Brassica carinata HOM05D030859 ORTHO05D000001 4.3e-41 171.4 118 69.5
BcaB08g34655 Brassica carinata HOM05D030859 ORTHO05D000001 5.2e-39 164.5 115 67.0
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 3.8e-21 105.1 105 47.6
Aa31LG1G6100 Aethionema arabicum HOM05D000002 ORTHO05D000001 7.1e-20 100.9 105 42.9
C09p34990 Brassica napus HOM05D000002 ORTHO05D000001 2.8e-16 89.0 105 41.0
BolC6t35286H Brassica oleracea HOM05D000002 ORTHO05D000001 1.8e-15 86.3 105 41.0
Hma1.2p1_0001F.1_g001500 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-14 82.4 100 39.0
Eucgr.E01636 Eucalyptus grandis HOM05D000002 ORTHO05D000001 4.5e-14 81.6 106 38.7
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.9e-14 80.5 101 41.6
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.3e-13 80.1 100 39.0
Oeu037102.1 Olea europaea HOM05D000002 ORTHO05D000001 2.2e-13 79.3 103 38.8
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.2e-13 79.3 95 40.0
Oeu057479.1 Olea europaea HOM05D000002 ORTHO05D000001 2.9e-13 79.0 101 36.6
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.9e-13 79.0 107 34.6
Oeu022190.1 Olea europaea HOM05D000002 ORTHO05D000001 3.8e-13 78.6 103 38.8
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 4.9e-13 78.2 101 35.6
QL02p077346 Quercus lobata HOM05D000002 ORTHO05D000001 4.9e-13 78.2 101 35.6
SHI11483 Sapria himalayana HOM05D014065 ORTHO05D000001 4.9e-13 78.2 105 37.1
Oeu008172.1 Olea europaea HOM05D000002 ORTHO05D000001 1.1e-12 77.0 101 35.6
Oeu057465.1 Olea europaea HOM05D000002 ORTHO05D000001 2.4e-12 75.9 101 35.6
HanXRQChr02g0040961 Helianthus annuus HOM05D000002 ORTHO05D000001 4.2e-12 75.1 108 36.1
Oeu011917.1 Olea europaea HOM05D000002 ORTHO05D000001 4.2e-12 75.1 101 34.7
Oeu053596.1 Olea europaea HOM05D000002 ORTHO05D000001 7.1e-12 74.3 101 35.6
SHI16346 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-12 74.3 105 35.2
Oeu039050.1 Olea europaea HOM05D000002 ORTHO05D000001 9.3e-12 73.9 101 33.7
HanXRQChr17g0570071 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-11 73.6 109 35.8
Hma1.2p1_1611F.1_g293530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-11 73.6 101 36.6
Hma1.2p1_0315F.1_g122550 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 1.6e-11 73.2 111 34.2
HanXRQChr14g0429151 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-11 72.8 109 34.9
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 3.5e-11 72.0 94 34.0
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.0e-11 71.2 93 36.6
Hma1.2p1_0270F.1_g108510 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 6.0e-11 71.2 106 36.8
COL.COLO4_20725 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.9e-11 70.9 94 34.0
TPR.G17518 Trifolium pratense HOM05D000002 ORTHO05D000001 7.9e-11 70.9 100 34.0
Hma1.2p1_0473F.1_g160130 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-10 70.1 100 35.0
TPR.G24932 Trifolium pratense HOM05D000002 ORTHO05D000001 1.8e-10 69.7 100 33.0
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.3e-10 69.3 99 34.3
COL.COLO4_23623 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.3e-10 69.3 99 33.3
HanXRQChr00c0303g0573321 Helianthus annuus HOM05D000002 ORTHO05D000001 2.3e-10 69.3 109 33.0
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.3e-10 69.3 101 35.6
Hma1.2p1_0939F.1_g239370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.3e-10 69.3 101 34.7
Rhsim08G0105700 Rhododendron simsii HOM05D000995 ORTHO05D000001 2.3e-10 69.3 72 45.8
HanXRQChr03g0064201 Helianthus annuus HOM05D000002 ORTHO05D000001 3.0e-10 68.9 109 33.9
ECA247G3681 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-10 68.6 109 35.8
ECA246G1142 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-10 68.2 99 35.4
Lj3g0007998 Lotus japonicus HOM05D000002 ORTHO05D000001 5.1e-10 68.2 100 36.0
HanXRQChr14g0457051 Helianthus annuus HOM05D000002 ORTHO05D000001 6.7e-10 67.8 109 33.9
ECA246G2243 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-10 67.4 100 33.0
ECA247G0128 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 109 34.9
HanXRQChr17g0566031 Helianthus annuus HOM05D000002 ORTHO05D000001 1.5e-09 66.6 109 34.9
Hma1.2p1_0565F.1_g179600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-09 66.6 101 33.7
Oeu012960.1 Olea europaea HOM05D000002 ORTHO05D000001 1.9e-09 66.2 114 31.6
Eucgr.F03845 Eucalyptus grandis HOM05D000053 ORTHO05D000035 2.5e-09 65.9 96 33.3
Hma1.2p1_0000F.1_g000910 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.5e-09 65.9 111 32.4
PGR102G3059 Punica granatum HOM05D000002 ORTHO05D000001 2.5e-09 65.9 89 37.1
ECA232G0091 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-09 65.5 99 30.3
ECA246G2563 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-09 65.1 108 32.4
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 9.6e-09 63.9 100 33.0
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 9.6e-09 63.9 100 33.0
COL.COLO4_29402 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.6e-08 63.2 75 37.3
SHI14897 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 63.2 71 39.4
HanXRQChr11g0320841 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-08 62.8 109 31.2
Sopen01g008940 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-08 62.4 70 42.9
Sopen07g023540 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-08 62.4 83 33.7
COL.COLO4_20536 Corchorus olitorius HOM05D000002 ORTHO05D000001 4.8e-08 61.6 100 30.0
COL.COLO4_30477 Corchorus olitorius HOM05D000002 ORTHO05D000001 4.8e-08 61.6 100 30.0
FvH4_7g19191 Fragaria vesca HOM05D000002 ORTHO05D000001 4.8e-08 61.6 101 31.7
HanXRQChr17g0568341 Helianthus annuus HOM05D000002 ORTHO05D000001 4.8e-08 61.6 109 31.2
HanXRQChr07g0189441 Helianthus annuus HOM05D002833 ORTHO05D003210 6.2e-08 61.2 112 31.2
ECA240G3677 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.4e-07 60.1 109 31.2
SHI35638 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-07 60.1 64 46.9
Sopen08g008710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-07 60.1 79 35.4
Actinidia04430 Actinidia chinensis HOM05D000002 ORTHO05D000001 2.4e-07 59.3 85 34.1
RcHm_v2.0_Chr2g0124571 Rosa chinensis HOM05D000011 ORTHO05D000157 3.1e-07 58.9 101 34.7
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 3.1e-07 58.9 101 34.7
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.0e-07 58.5 106 31.1
Hma1.2p1_0022F.1_g014640 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 4.0e-07 58.5 100 32.0
SHI18682 Sapria himalayana HOM05D004993 ORTHO05D000001 6.9e-07 57.8 87 37.9
SHI27389 Sapria himalayana HOM05D004993 ORTHO05D000001 6.9e-07 57.8 79 36.7
CiPaw.14G131300 Carya illinoinensis HOM05D000750 ORTHO05D000714 9.0e-07 57.4 68 35.3
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 9.0e-07 57.4 87 32.2
Atru.chr2.999 Acer truncatum HOM05D000002 ORTHO05D000001 1.2e-06 57.0 79 36.7
PSO832G1651 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-06 57.0 94 37.2
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-06 57.0 98 33.7
SHI38837 Sapria himalayana HOM05D004993 ORTHO05D000001 1.5e-06 56.6 76 38.2
Sed0021821 Sechium edule HOM05D000002 ORTHO05D000001 1.5e-06 56.6 89 33.7
COL.COLO4_33905 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.6e-06 55.8 92 30.4
SHI42894 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-06 55.1 69 39.1
QL04p024973 Quercus lobata HOM05D000002 ORTHO05D000001 5.8e-06 54.7 64 35.9
SHI03321 Sapria himalayana HOM05D004993 ORTHO05D000001 5.8e-06 54.7 59 40.7
SHI32039 Sapria himalayana HOM05D004993 ORTHO05D000001 5.8e-06 54.7 74 39.2
COL.COLO4_24324 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.6e-06 54.3 80 30.0
Nitab4.5_0000164g0090 Nicotiana tabacum HOM05D002833 ORTHO05D003210 7.6e-06 54.3 91 33.0
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-06 54.3 80 32.5
ECA248G0191 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-05 53.9 90 32.2


User provided reference genes

Program Settings