Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48677 Brassica carinata HOM05D007203 ORTHO05D020137 2.6e-63 245.4 134 100.0
C01p47030 Brassica napus HOM05D007203 ORTHO05D020137 2.6e-55 218.8 120 99.2
BolC1t04671H Brassica oleracea HOM05D007203 ORTHO05D020137 2.6e-55 218.8 120 99.2
BcaC08g43729 Brassica carinata HOM05D007203 ORTHO05D092975 3.7e-46 188.3 123 88.6
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 1.1e-45 186.8 133 83.5
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 1.4e-45 186.4 137 80.3
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 1.4e-45 186.4 133 82.7
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 4.1e-45 184.9 123 86.2
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 7.0e-45 184.1 123 87.0
BraA04t16843Z Brassica rapa HOM05D007203 ORTHO05D020137 7.0e-45 184.1 120 87.5
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 1.2e-44 183.3 123 83.7
C04p52660 Brassica napus HOM05D007203 ORTHO05D020137 1.6e-44 183.0 120 87.5
A01p36020 Brassica napus HOM05D007203 ORTHO05D020137 1.0e-43 180.3 123 86.2
BolC1t01561H Brassica oleracea HOM05D007203 ORTHO05D020137 4.7e-41 171.4 114 86.0
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-39 166.4 113 85.8
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 7.3e-34 147.5 133 70.7
C04p49980 Brassica napus HOM05D007203 ORTHO05D027555 8.9e-32 140.6 127 70.1
C06p32870 Brassica napus HOM05D007203 ORTHO05D102649 9.8e-31 137.1 115 73.0
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 4.9e-22 108.2 123 60.2
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 9.2e-21 104.0 124 58.9
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 1.3e-19 100.1 67 86.6
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 3.9e-19 98.6 124 58.1
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 8.6e-19 97.4 126 57.9
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 1.1e-18 97.1 120 59.2
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 1.1e-18 97.1 120 59.2
BcaB01g02001 Brassica carinata HOM05D007203 ORTHO05D008395 9.5e-18 94.0 120 55.0
BcaC04g23792 Brassica carinata HOM05D007203 ORTHO05D014981 8.1e-17 90.9 119 58.0
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 1.1e-16 90.5 122 56.6
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 1.8e-16 89.7 120 55.0
BcaB07g32667 Brassica carinata HOM05D003147 ORTHO05D003245 6.8e-16 87.8 128 52.3
BcaC05g26664 Brassica carinata HOM05D007203 ORTHO05D095942 2.0e-15 86.3 122 54.9
A02p26600 Brassica napus HOM05D007203 ORTHO05D020127 5.8e-15 84.7 65 73.8
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 7.6e-15 84.3 67 73.1
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 7.6e-15 84.3 67 73.1
BcaB03g16331 Brassica carinata HOM05D007203 ORTHO05D011558 2.4e-13 79.3 86 61.6
BcaB03g12495 Brassica carinata HOM05D007203 ORTHO05D020127 6.0e-12 74.7 69 66.7
BcaC04g20469 Brassica carinata HOM05D007203 ORTHO05D014981 3.0e-11 72.4 83 60.2
BcaB02g11369 Brassica carinata HOM05D007203 ORTHO05D094245 1.5e-10 70.1 82 57.3
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 4.3e-10 68.6 109 50.5
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 2.1e-09 66.2 117 47.9
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-08 63.5 70 60.0
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 1.4e-08 63.5 68 63.2
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 2.4e-08 62.8 70 58.6
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 3.1e-08 62.4 74 59.5
C06p20840 Brassica napus HOM05D007203 ORTHO05D014981 4.0e-08 62.0 68 58.8
A08p11290 Brassica napus HOM05D007203 ORTHO05D014981 5.2e-08 61.6 72 59.7
A07p08910 Brassica napus HOM05D007203 ORTHO05D014981 8.9e-08 60.8 67 65.7
BolC6t37271H Brassica oleracea HOM05D007203 ORTHO05D014981 8.9e-08 60.8 63 61.9
BcaC03g15868 Brassica carinata HOM05D007203 ORTHO05D008395 1.2e-07 60.5 67 64.2
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-07 60.5 71 57.7
BraA08t33125Z Brassica rapa HOM05D007203 ORTHO05D014981 1.2e-07 60.5 64 64.1
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 1.5e-07 60.1 78 57.7
BolC5t32659H Brassica oleracea HOM05D007203 ORTHO05D014981 1.5e-07 60.1 70 60.0
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 2.0e-07 59.7 67 59.7
C03p58910 Brassica napus HOM05D007203 ORTHO05D014981 2.0e-07 59.7 70 60.0
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 2.0e-07 59.7 67 59.7
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 2.0e-07 59.7 67 59.7
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-07 59.3 78 56.4
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-07 59.3 78 56.4
A08p11270 Brassica napus HOM05D007203 ORTHO05D014981 2.6e-07 59.3 70 60.0
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-07 59.3 69 56.5
BraA08t33122Z Brassica rapa HOM05D007203 ORTHO05D014981 2.6e-07 59.3 70 60.0
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 3.4e-07 58.9 67 62.7
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 3.4e-07 58.9 70 57.1
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 4.4e-07 58.5 67 58.2
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 5.8e-07 58.2 75 57.3
C08p21900 Brassica napus HOM05D007203 ORTHO05D020127 9.9e-07 57.4 67 58.2
BolC3t17978H Brassica oleracea HOM05D007203 ORTHO05D020127 9.9e-07 57.4 67 58.2
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 9.9e-07 57.4 72 54.2
C02p38520 Brassica napus HOM05D007203 ORTHO05D014981 8.4e-06 54.3 69 58.0


User provided reference genes

Program Settings