Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48582 Brassica carinata HOM05D008709 ORTHO05D024458 1.4e-84 316.2 164 100.0
BolC1t04791H Brassica oleracea HOM05D008709 ORTHO05D024458 4.1e-79 298.1 164 96.3
C01p48280 Brassica napus HOM05D008709 ORTHO05D024458 4.5e-78 294.7 164 95.1
BraA01t03864Z Brassica rapa HOM05D008709 ORTHO05D024458 6.7e-66 254.2 166 86.1
A01p38070 Brassica napus HOM05D008709 ORTHO05D024458 6.8e-58 227.6 137 91.2
BolC3t21545H Brassica oleracea HOM05D008709 ORTHO05D011440 1.9e-20 103.2 160 45.0
BcaC01g01470 Brassica carinata HOM05D008709 ORTHO05D011440 2.5e-20 102.8 160 45.0
C03p92330 Brassica napus HOM05D008709 ORTHO05D011440 2.5e-20 102.8 160 45.0
BolC3t17089H Brassica oleracea HOM05D008709 ORTHO05D011440 3.6e-19 99.0 160 44.4
BraA03t13118Z Brassica rapa HOM05D008709 ORTHO05D011440 4.0e-18 95.5 160 43.1
CARHR091160 Cardamine hirsuta HOM05D008709 ORTHO05D011440 5.2e-18 95.1 146 45.9
AT2G16005 Arabidopsis thaliana HOM05D008709 ORTHO05D011440 1.5e-17 93.6 161 42.9
BcaC01g03838 Brassica carinata HOM05D008709 ORTHO05D011440 1.1e-15 87.4 132 46.2
C03p48080 Brassica napus HOM05D008709 ORTHO05D011440 1.1e-15 87.4 132 46.2
BcaB04g18887 Brassica carinata HOM05D008709 ORTHO05D011440 7.1e-15 84.7 132 46.2
CARHR091170 Cardamine hirsuta HOM05D008709 ORTHO05D011440 2.7e-14 82.8 163 43.6
BcaC01g03839 Brassica carinata HOM05D008709 ORTHO05D011440 1.7e-13 80.1 132 47.0
BraA03t13112Z Brassica rapa HOM05D008709 ORTHO05D011440 1.9e-12 76.6 164 35.4
BcaB04g18876 Brassica carinata HOM05D008709 ORTHO05D011440 2.5e-12 76.3 132 43.2
CARHR091180 Cardamine hirsuta HOM05D008709 ORTHO05D011440 1.6e-11 73.6 164 39.6
BraA03t13114Z Brassica rapa HOM05D008709 ORTHO05D011440 1.4e-10 70.5 162 36.4
A03p39650 Brassica napus HOM05D008709 ORTHO05D011440 2.4e-10 69.7 166 33.7
BcaB04g18875 Brassica carinata HOM05D008709 ORTHO05D021804 3.1e-10 69.3 150 39.3
BcaB04g18874 Brassica carinata HOM05D008709 ORTHO05D011440 1.5e-09 67.0 162 34.0
BcaB04g18877 Brassica carinata HOM05D008709 ORTHO05D011440 2.0e-09 66.6 89 46.1
BraA09t38151Z Brassica rapa HOM05D014281 ORTHO05D027372 2.0e-09 66.6 146 39.0
C03p48140 Brassica napus HOM05D008709 ORTHO05D011440 4.9e-08 62.0 84 50.0
C01p25000 Brassica napus HOM05D014281 ORTHO05D027372 1.4e-07 60.5 130 40.0
BolC1t02444H Brassica oleracea HOM05D014281 ORTHO05D027372 1.4e-07 60.5 130 40.0
Thhalv10010794m.g Eutrema salsugineum HOM05D002139 ORTHO05D002264 1.4e-07 60.5 131 42.0
A03p39690 Brassica napus HOM05D008709 ORTHO05D011440 2.4e-07 59.7 85 49.4
BraA03t13117Z Brassica rapa HOM05D008709 ORTHO05D011440 4.2e-07 58.9 85 49.4
AT3G44100 Arabidopsis thaliana HOM05D002139 ORTHO05D002264 1.6e-06 57.0 150 39.3


User provided reference genes

Program Settings