Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48573 Brassica carinata HOM05D008216 ORTHO05D012788 2.8e-208 728.8 489 100.0
C01p48420 Brassica napus HOM05D008216 ORTHO05D012788 4.5e-174 615.1 540 77.0
BolC1t04801H Brassica oleracea HOM05D008216 ORTHO05D012788 2.2e-165 586.3 348 97.1
C01p48410 Brassica napus HOM05D008216 ORTHO05D012788 7.7e-158 561.2 346 94.5
BcaC09g48575 Brassica carinata HOM05D008216 ORTHO05D012788 3.8e-157 558.9 346 94.2
A01p38160 Brassica napus HOM05D008216 ORTHO05D012788 2.9e-149 532.7 347 90.2
BraA01t03874Z Brassica rapa HOM05D008216 ORTHO05D012788 2.9e-149 532.7 347 90.2
BcaB04g20891 Brassica carinata HOM05D008216 ORTHO05D012788 1.4e-138 497.3 346 83.2
Sp3g14290 Schrenkiella parvula HOM05D008216 ORTHO05D012788 1.1e-127 461.1 343 82.2
BcaB06g25696 Brassica carinata HOM05D008216 ORTHO05D012788 9.5e-116 421.4 343 77.0
BcaC05g28920 Brassica carinata HOM05D008216 ORTHO05D012788 2.3e-114 416.8 462 71.2
C05p50470 Brassica napus HOM05D008216 ORTHO05D012788 2.3e-114 416.8 462 71.2
BraA05t22171Z Brassica rapa HOM05D008216 ORTHO05D012788 3.4e-113 412.9 348 75.6
A05p33490 Brassica napus HOM05D008216 ORTHO05D012788 9.8e-113 411.4 348 75.3
AL3G28590 Arabidopsis lyrata HOM05D008216 ORTHO05D012788 8.3e-112 408.3 300 77.0
Carub.0003s1569 Capsella rubella HOM05D008216 ORTHO05D012788 1.9e-111 407.1 343 74.3
BolC5t33794H Brassica oleracea HOM05D008216 ORTHO05D012788 3.0e-109 399.8 283 79.5
Thhalv10020122m.g Eutrema salsugineum HOM05D008216 ORTHO05D012788 5.8e-105 385.6 344 73.5
AT3G15950 Arabidopsis thaliana HOM05D008216 ORTHO05D012788 1.7e-96 357.5 340 67.9
CARHR091090 Cardamine hirsuta HOM05D008216 ORTHO05D012788 3.0e-93 346.7 288 70.8
Carub.0001s4140 Capsella rubella HOM05D008216 ORTHO05D011188 5.7e-68 262.7 277 56.7
CARHR042550 Cardamine hirsuta HOM05D008216 ORTHO05D011188 1.8e-66 257.7 290 55.9
AT1G52410 Arabidopsis thaliana HOM05D008216 ORTHO05D011188 2.4e-66 257.3 289 55.4
Sp1g39030 Schrenkiella parvula HOM05D008216 ORTHO05D011188 2.0e-65 254.2 295 56.6
BraA05t20799Z Brassica rapa HOM05D008216 ORTHO05D011188 2.9e-64 250.4 296 54.7
BcaB02g10995 Brassica carinata HOM05D008216 ORTHO05D011188 5.0e-64 249.6 294 54.1
BcaC08g43993 Brassica carinata HOM05D008216 ORTHO05D011188 6.5e-64 249.2 291 56.0
C06p13990 Brassica napus HOM05D008216 ORTHO05D011188 6.5e-64 249.2 291 56.0
BolC6t36576H Brassica oleracea HOM05D008216 ORTHO05D011188 6.5e-64 249.2 291 56.0
A05p19020 Brassica napus HOM05D008216 ORTHO05D011188 1.1e-63 248.4 293 54.9
AL1G60670 Arabidopsis lyrata HOM05D008216 ORTHO05D011188 1.9e-63 247.7 276 55.4
Thhalv10011252m.g Eutrema salsugineum HOM05D008216 ORTHO05D011188 8.7e-61 238.8 275 54.2
A06p01810 Brassica napus HOM05D008216 ORTHO05D011188 1.1e-60 238.4 275 55.3
BcaC08g43426 Brassica carinata HOM05D008216 ORTHO05D011188 1.6e-59 234.6 275 54.9
AT3G15960 Arabidopsis thaliana HOM05D008216 ORTHO05D011188 2.8e-59 233.8 297 50.2
C06p07930 Brassica napus HOM05D008216 ORTHO05D011188 1.1e-58 231.9 275 54.2
BraA06t23398Z Brassica rapa HOM05D008216 ORTHO05D011188 5.3e-58 229.6 275 53.5
Aa31LG10G2510 Aethionema arabicum HOM05D008216 ORTHO05D011188 9.1e-58 228.8 271 53.5
BolC6t35876H Brassica oleracea HOM05D008216 ORTHO05D011188 8.5e-56 222.2 490 50.2
THA.LOC104818006 Tarenaya hassleriana HOM05D008216 ORTHO05D011188 8.8e-53 212.2 311 45.7
BcaC01g03848 Brassica carinata HOM05D008216 ORTHO05D011188 4.8e-51 206.5 292 46.2
BolC3t17077H Brassica oleracea HOM05D008216 ORTHO05D011188 4.8e-51 206.5 292 46.2
C03p47970 Brassica napus HOM05D008216 ORTHO05D011188 2.4e-50 204.1 271 47.2
BcaB04g18868 Brassica carinata HOM05D008216 ORTHO05D011188 7.2e-47 192.6 196 53.1
Thhalv10022078m.g Eutrema salsugineum HOM05D008216 ORTHO05D011188 5.7e-44 183.0 278 42.1
BcaB04g20890 Brassica carinata HOM05D008216 ORTHO05D011188 2.2e-43 181.0 295 39.7
A01p38150 Brassica napus HOM05D008216 ORTHO05D011188 2.8e-43 180.6 295 39.3
BolC1t04800H Brassica oleracea HOM05D008216 ORTHO05D011188 8.2e-43 179.1 273 40.7
C01p48400 Brassica napus HOM05D008216 ORTHO05D011188 4.1e-42 176.8 307 39.1
BraA01t03873Z Brassica rapa HOM05D008216 ORTHO05D011188 4.1e-42 176.8 307 39.1
BcaC09g48576 Brassica carinata HOM05D008216 ORTHO05D011188 5.9e-41 172.9 303 39.3
Sp3g14300 Schrenkiella parvula HOM05D008216 ORTHO05D011188 3.0e-37 160.6 263 40.3
Sp3g14310 Schrenkiella parvula HOM05D008216 ORTHO05D011188 1.3e-32 145.2 251 40.6
SpUN0970_0010 Schrenkiella parvula HOM05D008216 ORTHO05D011188 1.5e-31 141.7 238 43.3
CARHR090970 Cardamine hirsuta HOM05D008216 ORTHO05D011188 8.8e-29 132.5 195 42.6
AL3G28600 Arabidopsis lyrata HOM05D008216 ORTHO05D011188 1.8e-26 124.8 105 61.0
SpUn0637_0010 Schrenkiella parvula HOM05D008216 ORTHO05D011188 2.8e-06 57.8 139 33.8


User provided reference genes

Program Settings