Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48540 Brassica carinata HOM05D008596 ORTHO05D003268 5.1e-142 507.7 247 100.0
BraA02t07722Z Brassica rapa HOM05D008596 ORTHO05D003268 6.6e-41 171.8 99 79.8
A10p07860 Brassica napus HOM05D008596 ORTHO05D003268 2.0e-37 160.2 100 77.0
BraSC35t46014Z Brassica rapa HOM05D008596 ORTHO05D003268 2.0e-37 160.2 100 77.0
C05p36500 Brassica napus HOM05D008596 ORTHO05D003268 7.1e-35 151.8 96 71.9
A06p24280 Brassica napus HOM05D008596 ORTHO05D003268 5.1e-33 145.6 92 75.0
A06p25180 Brassica napus HOM05D008596 ORTHO05D003268 5.1e-33 145.6 92 75.0
A01p26930 Brassica napus HOM05D008596 ORTHO05D003268 6.6e-33 145.2 93 74.2
BraA03t15718Z Brassica rapa HOM05D008596 ORTHO05D003268 6.6e-33 145.2 113 64.6
BraA05t21116Z Brassica rapa HOM05D008596 ORTHO05D003268 1.5e-32 144.1 93 69.9
BraA05t18958Z Brassica rapa HOM05D008596 ORTHO05D003268 1.9e-32 143.7 93 72.0
A05p23070 Brassica napus HOM05D008596 ORTHO05D003268 3.3e-32 142.9 92 73.9
A03p66670 Brassica napus HOM05D008596 ORTHO05D003268 4.3e-32 142.5 101 69.3
BraA06t25464Z Brassica rapa HOM05D008596 ORTHO05D003268 2.4e-30 136.7 92 70.7
C05p36160 Brassica napus HOM05D008596 ORTHO05D003268 3.1e-30 136.3 92 68.5
A05p24140 Brassica napus HOM05D008596 ORTHO05D003268 7.6e-29 131.7 106 61.3
A08p08190 Brassica napus HOM05D008596 ORTHO05D003268 2.2e-28 130.2 92 65.2
A09p30520 Brassica napus HOM05D008596 ORTHO05D003268 4.9e-28 129.0 93 63.4
BraA06t25539Z Brassica rapa HOM05D008596 ORTHO05D003268 1.0e-25 121.3 74 77.0
A05p19660 Brassica napus HOM05D008596 ORTHO05D003268 2.1e-23 113.6 71 76.1
BraA06t25541Z Brassica rapa HOM05D008596 ORTHO05D003268 3.9e-17 92.8 105 49.5
A03p66770 Brassica napus HOM05D008596 ORTHO05D003268 4.3e-16 89.4 63 69.8
A01p26840 Brassica napus HOM05D008596 ORTHO05D003268 3.7e-15 86.3 64 65.6
A06p23500 Brassica napus HOM05D008596 ORTHO05D003268 8.2e-15 85.1 51 74.5
BcaC07g37388 Brassica carinata HOM05D003421 ORTHO05D003268 1.5e-13 80.9 168 37.5
A05p29660 Brassica napus HOM05D008596 ORTHO05D003268 7.6e-13 78.6 59 62.7
C02p44760 Brassica napus HOM05D008596 ORTHO05D041475 1.4e-11 74.3 71 47.9
BolC2t10518H Brassica oleracea HOM05D008596 ORTHO05D041475 4.2e-11 72.8 74 50.0
BolC5t32276H Brassica oleracea HOM05D008596 ORTHO05D024662 4.6e-10 69.3 44 70.5
BNapus_Darmor_BZH_scaffold_294p00010 Brassica napus HOM05D008596 ORTHO05D003268 7.9e-10 68.6 61 52.5
BcaC05g28706 Brassica carinata HOM05D003421 ORTHO05D003268 3.9e-09 66.2 117 33.3
BcaC01g02176 Brassica carinata HOM05D008596 ORTHO05D027031 6.7e-09 65.5 86 41.9
C03p67380 Brassica napus HOM05D008596 ORTHO05D027031 6.7e-09 65.5 86 41.9
BolC9t56870H Brassica oleracea HOM05D003421 ORTHO05D003268 6.7e-09 65.5 132 34.8
BcaC06g35963 Brassica carinata HOM05D008596 ORTHO05D031778 8.7e-09 65.1 46 69.6
C03p67400 Brassica napus HOM05D008596 ORTHO05D027031 2.5e-08 63.5 86 40.7
BolC5t31957H Brassica oleracea HOM05D003421 ORTHO05D003268 5.7e-08 62.4 178 31.5
BcaC02g10760 Brassica carinata HOM05D003421 ORTHO05D003268 1.6e-07 60.8 140 29.3
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 4.8e-07 59.3 118 31.4
BcaNung06003 Brassica carinata HOM05D003421 ORTHO05D003268 8.2e-07 58.5 88 36.4
BcaC04g20094 Brassica carinata HOM05D003421 ORTHO05D003268 1.8e-06 57.4 109 32.1
BcaC04g20847 Brassica carinata HOM05D008969 ORTHO05D012202 1.8e-06 57.4 114 33.3
BolC4t24275H Brassica oleracea HOM05D007986 ORTHO05D003268 2.4e-06 57.0 45 60.0
BolC8t47961H Brassica oleracea HOM05D007986 ORTHO05D039790 2.4e-06 57.0 59 45.8
BolC3t19358H Brassica oleracea HOM05D003421 ORTHO05D003268 3.1e-06 56.6 118 30.5
BolC9t56013H Brassica oleracea HOM05D003421 ORTHO05D003268 4.1e-06 56.2 131 30.5
BcaB05g23443 Brassica carinata HOM05D003421 ORTHO05D003268 5.3e-06 55.8 125 28.8
BcaC07g37583 Brassica carinata HOM05D008969 ORTHO05D012202 6.9e-06 55.5 40 60.0
BcaC01g01929 Brassica carinata HOM05D008969 ORTHO05D012202 9.0e-06 55.1 90 37.8
BcaC06g36330 Brassica carinata HOM05D003421 ORTHO05D003268 9.0e-06 55.1 80 40.0
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 9.0e-06 55.1 59 47.5
BolC3t19281H Brassica oleracea HOM05D003421 ORTHO05D003268 9.0e-06 55.1 118 28.8


User provided reference genes

Program Settings