Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48512 Brassica carinata HOM05D000010 ORTHO05D000151 7.2e-80 300.4 144 100.0
BcaC09g48513 Brassica carinata HOM05D000010 ORTHO05D000151 7.2e-80 300.4 144 100.0
BolC1t04859H Brassica oleracea HOM05D000010 ORTHO05D000151 2.6e-77 292.0 144 97.2
C01p48950 Brassica napus HOM05D000010 ORTHO05D000151 9.7e-77 290.0 144 96.5
A01p38780 Brassica napus HOM05D000010 ORTHO05D000151 4.8e-76 287.7 144 95.8
BraA01t03907Z Brassica rapa HOM05D000010 ORTHO05D000151 1.1e-75 286.6 144 95.1
BcaB06g29584 Brassica carinata HOM05D000010 ORTHO05D000151 1.2e-53 213.4 160 68.1
BolC5t33852H Brassica oleracea HOM05D000010 ORTHO05D000151 2.3e-49 199.1 160 64.4
C05p51660 Brassica napus HOM05D000010 ORTHO05D000151 3.0e-49 198.7 160 64.4
BcaC05g28972 Brassica carinata HOM05D000010 ORTHO05D000151 3.9e-49 198.4 160 64.4
Sp3g13750 Schrenkiella parvula HOM05D000010 ORTHO05D000151 3.9e-49 198.4 154 66.9
A05p33920 Brassica napus HOM05D000010 ORTHO05D000151 1.5e-48 196.4 160 64.4
BraA05t22214Z Brassica rapa HOM05D000010 ORTHO05D000151 1.5e-48 196.4 160 64.4
BcaB04g20923 Brassica carinata HOM05D000325 ORTHO05D000583 3.3e-48 195.3 108 88.0
Carub.0003s1522 Capsella rubella HOM05D000010 ORTHO05D000151 2.6e-45 185.7 144 66.0
AT3G15500 Arabidopsis thaliana HOM05D000010 ORTHO05D000151 1.7e-44 183.0 145 68.3
CARHR090550 Cardamine hirsuta HOM05D000010 ORTHO05D000151 4.9e-44 181.4 144 66.7
AL3G28070 Arabidopsis lyrata HOM05D000010 ORTHO05D000151 1.0e-41 173.7 159 63.5
Thhalv10021174m.g Eutrema salsugineum HOM05D000010 ORTHO05D000151 2.6e-37 159.1 152 59.2
BolC3t17045H Brassica oleracea HOM05D000010 ORTHO05D000151 6.6e-25 117.9 155 47.7
BcaC01g03872 Brassica carinata HOM05D000010 ORTHO05D000151 4.3e-24 115.2 155 47.7
C03p47700 Brassica napus HOM05D000010 ORTHO05D000151 4.3e-24 115.2 155 47.1
BraA03t13082Z Brassica rapa HOM05D000010 ORTHO05D000151 5.6e-24 114.8 155 47.7
Aa31LG8G2730 Aethionema arabicum HOM05D000010 ORTHO05D000151 5.6e-16 88.2 165 38.8
AL1G61210 Arabidopsis lyrata HOM05D000010 ORTHO05D000151 1.6e-15 86.7 158 43.7
Thhalv10011676m.g Eutrema salsugineum HOM05D000010 ORTHO05D000151 1.4e-14 83.6 151 45.0
AT1G52890 Arabidopsis thaliana HOM05D000010 ORTHO05D000151 2.4e-14 82.8 157 42.0
BcaB07g33377 Brassica carinata HOM05D000010 ORTHO05D000151 5.3e-14 81.6 152 44.7
BcaC08g43474 Brassica carinata HOM05D002355 ORTHO05D000239 2.9e-12 75.9 150 42.0
C06p08590 Brassica napus HOM05D000010 ORTHO05D000151 2.9e-12 75.9 150 42.0
Carub.0001s4204 Capsella rubella HOM05D000010 ORTHO05D000151 3.8e-12 75.5 152 41.4
A06p01440 Brassica napus HOM05D000010 ORTHO05D000151 4.9e-12 75.1 153 42.5
BolC6t35937H Brassica oleracea HOM05D000010 ORTHO05D000151 8.4e-12 74.3 141 41.8
BraA06t23366Z Brassica rapa HOM05D000010 ORTHO05D000151 1.4e-11 73.6 144 42.4
THA.LOC104818059 Tarenaya hassleriana HOM05D000010 ORTHO05D000151 1.9e-11 73.2 165 38.8
SpUn0602_0010 Schrenkiella parvula HOM05D000010 ORTHO05D000151 3.5e-10 68.9 149 41.6
CARHR043110 Cardamine hirsuta HOM05D000010 ORTHO05D000151 3.1e-06 55.8 154 37.0
Oeu060541.1 Olea europaea HOM05D000010 ORTHO05D000151 3.1e-06 55.8 77 45.5
Sabra11G0108900 Salix brachista HOM05D000010 ORTHO05D000151 6.9e-06 54.7 87 44.8


User provided reference genes

Program Settings