Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48468 Brassica carinata HOM05D000171 ORTHO05D039981 5.9e-48 193.7 89 100.0
BcaC09g47783 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-33 146.4 103 70.9
BcaC09g47784 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-33 146.4 103 70.9
C01p49440 Brassica napus HOM05D000171 ORTHO05D039981 1.4e-33 146.0 74 90.5
BolC1t05731H Brassica oleracea HOM05D000171 ORTHO05D000101 4.2e-30 134.4 74 82.4
BNapus_Darmor_BZH_scaffold_78p00970 Brassica napus HOM05D000171 ORTHO05D000101 6.1e-29 130.6 74 81.1
BcaB04g21336 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-17 93.2 79 60.8
BcaC09g47782 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-17 92.4 73 58.9
BolC1t05729H Brassica oleracea HOM05D000171 ORTHO05D000101 2.4e-17 92.0 71 60.6
AL3G14710 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.1e-17 91.3 69 60.9
BNapus_Darmor_BZH_scaffold_118p00140 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-16 89.7 77 58.4
BraA01t04439Z Brassica rapa HOM05D000171 ORTHO05D000101 1.2e-16 89.7 77 58.4
BcaC05g26731 Brassica carinata HOM05D000171 ORTHO05D000101 5.9e-16 87.4 60 70.0
Sp3g03500 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.8e-12 75.9 65 55.4
CARHR078890 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.4e-11 71.6 62 56.5
BcaB04g21337 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-10 69.7 50 64.0
AL7G22270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.4e-09 66.2 63 52.4
Carub.0007s1067 Capsella rubella HOM05D000171 ORTHO05D000101 1.8e-09 65.9 72 45.8
Thhalv10022230m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.8e-09 65.9 65 49.2
CARHR078870 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.2e-08 63.2 62 50.0
AT3G04660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.0e-08 62.4 57 49.1
AT4G29970 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.5e-08 61.6 60 53.3
Thhalv10026790m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.5e-08 61.2 69 44.9
BcaC04g22840 Brassica carinata HOM05D000171 ORTHO05D000101 7.8e-08 60.5 57 50.9
A09p12470 Brassica napus HOM05D000171 ORTHO05D000101 7.8e-08 60.5 57 50.9
C09p14760 Brassica napus HOM05D000171 ORTHO05D000101 7.8e-08 60.5 57 50.9
BolC9t54378H Brassica oleracea HOM05D000171 ORTHO05D000101 7.8e-08 60.5 57 50.9
BraA09t36891Z Brassica rapa HOM05D000171 ORTHO05D000101 7.8e-08 60.5 57 50.9
CARHR201470 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.0e-07 60.1 62 43.5
AL3G14700 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.6e-07 57.4 56 50.0
Sp3g03510 Schrenkiella parvula HOM05D000171 ORTHO05D000101 6.6e-07 57.4 68 44.1
AL3G14200 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.6e-07 57.0 71 38.0
Carub.0003s1002 Capsella rubella HOM05D000171 ORTHO05D000101 2.5e-06 55.5 64 42.2
Carub.0006s1027 Capsella rubella HOM05D000171 ORTHO05D000101 4.3e-06 54.7 64 37.5
BcaC04g22265 Brassica carinata HOM05D000171 ORTHO05D000101 7.3e-06 53.9 64 43.8
C09p21460 Brassica napus HOM05D000171 ORTHO05D000101 7.3e-06 53.9 64 43.8
BolC9t55046H Brassica oleracea HOM05D000171 ORTHO05D000101 7.3e-06 53.9 64 43.8
BolC9t55051H Brassica oleracea HOM05D000171 ORTHO05D000101 7.3e-06 53.9 64 43.8
BraA09t38680Z Brassica rapa HOM05D000171 ORTHO05D000101 7.3e-06 53.9 64 43.8
AL6G22600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.5e-06 53.5 63 39.7


User provided reference genes

Program Settings