Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48466 Brassica carinata HOM05D008838 ORTHO05D011792 5.5e-101 370.9 184 100.0
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 1.4e-72 276.6 222 68.5
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 1.4e-59 233.4 221 58.8
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 9.3e-40 167.5 213 45.5
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 8.7e-38 161.0 211 44.1
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 9.6e-37 157.5 217 41.9
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 1.6e-31 140.2 214 39.3
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 7.9e-31 137.9 210 40.0
BcaB01g01348 Brassica carinata HOM05D008838 ORTHO05D021876 1.8e-30 136.7 187 41.7
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 6.7e-30 134.8 104 68.3
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 6.7e-30 134.8 104 68.3
BcaB06g27480 Brassica carinata HOM05D008838 ORTHO05D021876 1.6e-28 130.2 113 58.4
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 1.1e-27 127.5 205 38.0
BcaC06g35711 Brassica carinata HOM05D008838 ORTHO05D039997 2.4e-27 126.3 114 56.1
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 6.5e-25 118.2 191 38.2
C07p13430 Brassica napus HOM05D008838 ORTHO05D027188 8.5e-25 117.9 117 54.7
BolC7t41838H Brassica oleracea HOM05D008838 ORTHO05D027188 8.5e-25 117.9 117 54.7
BcaB02g06726 Brassica carinata HOM05D009418 ORTHO05D094631 1.1e-24 117.5 190 38.4
BraA05t19813Z Brassica rapa HOM05D008838 ORTHO05D027188 1.9e-24 116.7 116 55.2
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 2.5e-24 116.3 186 38.2
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 3.2e-24 115.9 186 37.1
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 7.2e-24 114.8 168 38.1
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 1.6e-23 113.6 209 34.4
BraSC37t46125Z Brassica rapa HOM05D009418 ORTHO05D018626 4.6e-23 112.1 180 36.7
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 7.9e-23 111.3 115 53.9
BolC4t27750H Brassica oleracea HOM05D009418 ORTHO05D018626 7.9e-23 111.3 181 36.5
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 1.4e-22 110.5 115 55.7
A10p08780 Brassica napus HOM05D009418 ORTHO05D018626 1.4e-22 110.5 180 36.1
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 1.4e-22 110.5 115 55.7
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 2.3e-22 109.8 206 35.0
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 2.3e-22 109.8 114 54.4
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 7.4e-21 104.8 215 30.7
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 9.7e-21 104.4 108 51.9
BcaC06g35569 Brassica carinata HOM05D008838 ORTHO05D027188 2.8e-20 102.8 113 51.3
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 2.8e-20 102.8 194 29.9
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 4.8e-20 102.1 214 30.4
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 6.3e-20 101.7 209 31.6
C08p22740 Brassica napus HOM05D009418 ORTHO05D018626 1.1e-19 100.9 180 35.6
BolC8t49910H Brassica oleracea HOM05D009418 ORTHO05D018626 1.1e-19 100.9 180 35.6
BraA07t29803Z Brassica rapa HOM05D008838 ORTHO05D024146 1.1e-19 100.9 74 68.9
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 1.4e-19 100.5 181 30.9
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 1.8e-19 100.1 218 30.7
BcaC08g46851 Brassica carinata HOM05D009418 ORTHO05D090315 4.1e-19 99.0 215 31.2
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 6.9e-19 98.2 194 29.4
BcaB07g32738 Brassica carinata HOM05D008838 ORTHO05D092174 9.1e-19 97.8 115 46.1
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 2.0e-18 96.7 208 31.7
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 5.9e-18 95.1 213 27.7
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 7.7e-18 94.7 209 31.1
BolC6t37094H Brassica oleracea HOM05D008838 ORTHO05D017578 7.7e-18 94.7 76 67.1
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 1.0e-17 94.4 213 27.7
BcaB07g33121 Brassica carinata HOM05D009418 ORTHO05D027366 1.7e-17 93.6 79 58.2
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 1.7e-17 93.6 206 27.7
BolC5t33635H Brassica oleracea HOM05D008838 ORTHO05D017578 2.2e-17 93.2 76 65.8
C04p58410 Brassica napus HOM05D009418 ORTHO05D017574 2.9e-17 92.8 96 53.1
BraA08t34215Z Brassica rapa HOM05D008838 ORTHO05D017578 1.4e-16 90.5 76 63.2
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 1.2e-15 87.4 147 35.4
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 1.6e-15 87.0 194 28.4
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 4.7e-15 85.5 192 29.2
A03p26800 Brassica napus HOM05D016807 ORTHO05D021876 1.8e-14 83.6 72 59.7
A04p22210 Brassica napus HOM05D016807 ORTHO05D021876 1.8e-14 83.6 72 59.7
A03p68050 Brassica napus HOM05D009418 ORTHO05D027366 2.0e-13 80.1 102 44.1
BraA01t02667Z Brassica rapa HOM05D009418 ORTHO05D027366 2.0e-13 80.1 102 44.1
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 5.7e-13 78.6 193 31.6
C06p00920 Brassica napus HOM05D008838 ORTHO05D024146 5.7e-13 78.6 61 63.9
BolC9t56622H Brassica oleracea HOM05D013280 ORTHO05D011792 9.7e-13 77.8 155 31.6
BraA04t18509Z Brassica rapa HOM05D005627 ORTHO05D021837 1.3e-12 77.4 138 31.2
BraA03t11891Z Brassica rapa HOM05D016807 ORTHO05D021876 6.3e-12 75.1 60 63.3
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 1.1e-11 74.3 199 26.1
BolC6t35227H Brassica oleracea HOM05D016807 ORTHO05D024146 1.1e-11 74.3 60 61.7
BcaB08g36732 Brassica carinata HOM05D009418 ORTHO05D011792 1.4e-11 73.9 105 42.9
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 1.8e-11 73.6 199 25.6
BcaB01g01826 Brassica carinata HOM05D009418 ORTHO05D092826 2.4e-11 73.2 144 31.2
BolC7t41167H Brassica oleracea HOM05D005627 ORTHO05D011792 7.0e-11 71.6 107 35.5
BcaB04g18332 Brassica carinata HOM05D008838 ORTHO05D093904 1.5e-08 63.9 35 68.6
BolC5t32399H Brassica oleracea HOM05D008838 ORTHO05D021837 1.9e-08 63.5 40 60.0
BraA08t34214Z Brassica rapa HOM05D008838 ORTHO05D021837 2.5e-08 63.2 40 60.0
BolC5t33636H Brassica oleracea HOM05D008838 ORTHO05D021837 5.5e-08 62.0 40 57.5
A06p26780 Brassica napus HOM05D008838 ORTHO05D100584 7.2e-08 61.6 55 54.5
A08p09530 Brassica napus HOM05D006289 ORTHO05D019882 7.2e-08 61.6 150 31.3
BraA08t32951Z Brassica rapa HOM05D006289 ORTHO05D019882 7.2e-08 61.6 150 31.3
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 9.4e-08 61.2 80 37.5
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 1.6e-07 60.5 106 34.9
BcaB02g10994 Brassica carinata HOM05D005627 ORTHO05D011976 4.7e-07 58.9 105 36.2
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 6.1e-07 58.5 77 37.7
BcaC08g46023 Brassica carinata HOM05D005627 ORTHO05D011976 6.1e-07 58.5 111 36.0
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 8.0e-07 58.2 77 39.0
A04p16270 Brassica napus HOM05D006289 ORTHO05D019882 8.0e-07 58.2 147 31.3
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 1.8e-06 57.0 111 34.2
BolC2t11140H Brassica oleracea HOM05D005627 ORTHO05D011976 1.8e-06 57.0 111 34.2
BraA04t17266Z Brassica rapa HOM05D006289 ORTHO05D019882 1.8e-06 57.0 130 30.0
BcaC01g03482 Brassica carinata HOM05D006289 ORTHO05D032299 3.0e-06 56.2 79 38.0
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 3.0e-06 56.2 109 33.9
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 4.0e-06 55.8 162 22.8
BcaC04g20743 Brassica carinata HOM05D006289 ORTHO05D027118 4.0e-06 55.8 96 32.3
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 4.0e-06 55.8 106 30.2
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 4.0e-06 55.8 105 35.2
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 4.0e-06 55.8 109 32.1
BraA05t20302Z Brassica rapa HOM05D006289 ORTHO05D027692 4.0e-06 55.8 106 30.2
BcaC03g16702 Brassica carinata HOM05D006289 ORTHO05D039115 5.2e-06 55.5 84 32.1
BolC2t10570H Brassica oleracea HOM05D006289 ORTHO05D040995 5.2e-06 55.5 84 32.1
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 5.2e-06 55.5 111 31.5
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 6.7e-06 55.1 109 32.1
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 6.7e-06 55.1 79 36.7
A01p38290 Brassica napus HOM05D013280 ORTHO05D011792 8.8e-06 54.7 74 39.2


User provided reference genes

Program Settings