Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 3.8e-76 288.1 148 100.0
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-62 243.0 136 92.6
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-61 240.0 128 96.1
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 2.9e-60 235.3 128 95.3
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 8.5e-60 233.8 128 94.5
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 8.5e-60 233.8 128 93.0
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 3.2e-59 231.9 128 93.0
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 7.2e-59 230.7 128 92.2
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 4.7e-58 228.0 128 93.0
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 8.0e-58 227.3 128 92.2
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-56 223.4 128 89.8
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 1.2e-56 223.4 128 89.8
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 4.4e-56 221.5 128 89.8
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 2.7e-53 212.2 128 86.7
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-51 206.5 128 85.9
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 1.5e-51 206.5 116 92.2
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-51 206.1 111 95.5
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 2.5e-51 205.7 113 92.9
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 4.7e-50 201.4 113 92.9
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 6.1e-50 201.1 113 92.0
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 2.3e-49 199.1 130 82.3
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 5.2e-49 198.0 112 91.1
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 6.8e-49 197.6 113 91.2
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 6.8e-49 197.6 113 91.2
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 2.6e-48 195.7 130 81.5
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 4.8e-47 191.4 130 78.5
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 4.8e-47 191.4 130 78.5
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 6.3e-47 191.0 130 79.2
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 6.3e-47 191.0 130 79.2
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 4.5e-45 184.9 128 78.9
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-44 183.0 127 79.5
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 6.5e-44 181.0 128 78.1
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 8.6e-44 180.6 128 77.3
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-43 179.5 128 75.8
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 2.5e-43 179.1 128 76.6
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 3.0e-41 172.2 135 72.6
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 8.9e-41 170.6 128 74.2
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-40 170.2 120 78.3
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-40 170.2 118 78.8
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 1.2e-40 170.2 118 78.8
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 1.5e-40 169.9 130 73.8
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 2.0e-40 169.5 128 75.0
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 2.0e-40 169.5 130 73.8
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 2.0e-40 169.5 130 73.8
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 2.6e-40 169.1 118 78.0
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 2.2e-39 166.0 128 71.1
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 3.7e-39 165.2 128 72.7
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 3.7e-39 165.2 104 86.5
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 7.0e-38 161.0 128 70.3
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 7.0e-38 161.0 128 70.3
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 4.5e-37 158.3 89 92.1
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 7.8e-37 157.5 107 82.2
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 2.9e-36 155.6 117 72.6
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-35 153.3 113 76.1
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 4.3e-35 151.8 87 89.7
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 9.5e-35 150.6 113 73.5
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 1.8e-33 146.4 109 74.3
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 1.8e-33 146.4 109 74.3
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 8.9e-33 144.1 113 70.8
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 2.0e-32 142.9 77 93.5
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 5.8e-32 141.4 77 92.2
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 7.5e-32 141.0 108 72.2
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 7.5e-32 141.0 128 64.1
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 6.4e-31 137.9 76 93.4
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-30 136.7 99 78.8
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-30 136.7 77 92.2
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 2.4e-30 136.0 128 62.5
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 9.2e-30 134.0 127 63.8
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 2.0e-29 132.9 127 63.8
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 2.0e-29 132.9 127 63.8
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 2.7e-29 132.5 125 60.8
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 4.6e-29 131.7 120 66.7
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 6.0e-29 131.3 128 61.7
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 7.8e-29 131.0 102 72.5
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 7.8e-29 131.0 128 61.7
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 2.3e-28 129.4 99 72.7
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 3.3e-27 125.6 68 92.6
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 3.3e-27 125.6 77 84.4
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 2.1e-26 122.9 121 61.2
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 8.0e-26 120.9 66 90.9
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 2.0e-24 116.3 66 90.9
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 2.6e-24 115.9 112 61.6
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 9.8e-24 114.0 117 59.8
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 4.9e-23 111.7 128 54.7
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 4.9e-23 111.7 128 54.7
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 1.9e-22 109.8 137 48.9
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 5.4e-22 108.2 110 61.8
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 7.0e-22 107.8 137 49.6
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 1.6e-21 106.7 117 54.7
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 4.6e-21 105.1 82 73.2
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 1.3e-20 103.6 128 53.1
BolC1t03480H Brassica oleracea HOM05D004489 ORTHO05D033093 1.1e-19 100.5 53 96.2
C05p32350 Brassica napus HOM05D004489 ORTHO05D033093 1.5e-19 100.1 54 92.6
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 9.5e-19 97.4 128 50.8
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 1.1e-17 94.0 86 62.8
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 2.3e-17 92.8 122 53.3
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 4.0e-17 92.0 50 90.0
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 4.4e-16 88.6 126 46.8
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 4.4e-16 88.6 118 47.5
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 2.9e-15 85.9 130 45.4
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 2.9e-15 85.9 104 54.8
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 4.9e-15 85.1 117 48.7
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 1.4e-14 83.6 131 42.7
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 1.9e-14 83.2 130 45.4
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 1.2e-13 80.5 129 43.4
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 3.5e-13 79.0 123 43.9
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 6.0e-13 78.2 132 42.4
BraA05t21091Z Brassica rapa HOM05D004489 ORTHO05D033093 7.8e-13 77.8 56 76.8
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 3.0e-12 75.9 130 42.3
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 3.0e-12 75.9 128 42.2
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 3.9e-12 75.5 68 61.8
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 3.9e-12 75.5 68 61.8
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 2.5e-11 72.8 48 77.1
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 7.3e-11 71.2 128 39.1
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 7.3e-11 71.2 128 39.1
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 1.2e-10 70.5 117 47.0
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 1.2e-10 70.5 84 51.2
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 1.2e-10 70.5 57 71.9
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 1.6e-10 70.1 57 71.9
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 2.8e-10 69.3 41 85.4
BolC6t37761H Brassica oleracea HOM05D004489 ORTHO05D104721 2.8e-10 69.3 111 45.0
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 3.6e-10 68.9 58 67.2
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 3.6e-10 68.9 58 67.2
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 6.2e-10 68.2 83 53.0
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 8.1e-10 67.8 59 62.7
BraA01t02913Z Brassica rapa HOM05D004489 ORTHO05D021897 4.4e-08 62.0 53 66.0
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 8.4e-07 57.8 120 35.8
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 1.9e-06 56.6 109 40.4
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 4.2e-06 55.5 70 50.0
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 7.1e-06 54.7 54 61.1


User provided reference genes

Program Settings