Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48319 Brassica carinata HOM05D007244 ORTHO05D027185 5.4e-102 374.4 199 100.0
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 4.3e-22 109.0 186 40.3
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 4.3e-22 109.0 186 40.3
C04p07250 Brassica napus HOM05D007244 ORTHO05D021882 1.8e-17 93.6 174 37.9
BcaC02g06995 Brassica carinata HOM05D007244 ORTHO05D021589 3.1e-12 76.3 202 34.7
C03p08760 Brassica napus HOM05D007244 ORTHO05D021882 3.1e-12 76.3 213 35.2
C03p17430 Brassica napus HOM05D007244 ORTHO05D021882 3.4e-11 72.8 213 34.3
A05p03870 Brassica napus HOM05D007244 ORTHO05D027185 9.8e-11 71.2 66 57.6
BolC4t27676H Brassica oleracea HOM05D007244 ORTHO05D011635 1.3e-10 70.9 201 35.3
C04p17430 Brassica napus HOM05D007244 ORTHO05D021589 1.7e-10 70.5 211 33.6
BolC5t29837H Brassica oleracea HOM05D007244 ORTHO05D021589 1.7e-10 70.5 159 36.5
BcaB07g33782 Brassica carinata HOM05D007244 ORTHO05D021882 6.4e-10 68.6 123 41.5
BolC7t40576H Brassica oleracea HOM05D007244 ORTHO05D039184 1.4e-09 67.4 217 32.7
BraA09t35781Z Brassica rapa HOM05D007244 ORTHO05D033844 1.4e-09 67.4 216 33.8
BcaC02g11343 Brassica carinata HOM05D007244 ORTHO05D021589 1.9e-09 67.0 179 34.6
BcaC06g36660 Brassica carinata HOM05D007244 ORTHO05D039184 5.4e-09 65.5 166 34.3
BcaC09g50339 Brassica carinata HOM05D003857 ORTHO05D004454 9.2e-09 64.7 221 32.6
BolC7t43259H Brassica oleracea HOM05D007244 ORTHO05D105349 2.0e-08 63.5 135 35.6
A01p30910 Brassica napus HOM05D063828 ORTHO05D040804 4.6e-08 62.4 170 34.1
A06p08650 Brassica napus HOM05D007244 ORTHO05D011635 6.0e-08 62.0 178 36.5
BolC6t35250H Brassica oleracea HOM05D007244 ORTHO05D015497 7.8e-08 61.6 214 33.2
BraA08t34457Z Brassica rapa HOM05D007244 ORTHO05D040510 7.8e-08 61.6 170 33.5
BolC9t55947H Brassica oleracea HOM05D002126 ORTHO05D002195 1.0e-07 61.2 181 33.1
C04p63540 Brassica napus HOM05D007244 ORTHO05D040510 1.3e-07 60.8 170 34.7
BolC2t08787H Brassica oleracea HOM05D063828 ORTHO05D040804 1.3e-07 60.8 176 36.9
BcaB06g25985 Brassica carinata HOM05D001708 ORTHO05D001649 1.7e-07 60.5 136 36.0
BcaC09g48023 Brassica carinata HOM05D007244 ORTHO05D011635 1.7e-07 60.5 171 36.8
BNapus_Darmor_BZH_scaffold_167p00080 Brassica napus HOM05D000496 ORTHO05D000411 1.7e-07 60.5 137 34.3
BcaC01g06431 Brassica carinata HOM05D000501 ORTHO05D000376 2.3e-07 60.1 180 33.3
BraA03t12268Z Brassica rapa HOM05D007244 ORTHO05D033844 2.3e-07 60.1 222 31.5
BolC8t49580H Brassica oleracea HOM05D007244 ORTHO05D027899 3.0e-07 59.7 71 47.9
BcaC09g48969 Brassica carinata HOM05D007244 ORTHO05D011635 3.9e-07 59.3 94 42.6
A04p29850 Brassica napus HOM05D007244 ORTHO05D028076 6.6e-07 58.5 200 32.0
BolC3t21246H Brassica oleracea HOM05D007244 ORTHO05D024067 6.6e-07 58.5 162 35.2
BraA04t18445Z Brassica rapa HOM05D007244 ORTHO05D028076 6.6e-07 58.5 200 32.0
BcaB04g20713 Brassica carinata HOM05D007244 ORTHO05D011635 1.1e-06 57.8 179 31.8
BraA10t42654Z Brassica rapa HOM05D007244 ORTHO05D024067 1.1e-06 57.8 176 38.1
BcaB06g28967 Brassica carinata HOM05D007244 ORTHO05D021589 1.5e-06 57.4 191 34.0
BolC3t20591H Brassica oleracea HOM05D007244 ORTHO05D011635 1.5e-06 57.4 150 38.0
BcaC01g04059 Brassica carinata HOM05D007244 ORTHO05D024067 1.9e-06 57.0 178 33.7
BcaC02g09020 Brassica carinata HOM05D001292 ORTHO05D001202 1.9e-06 57.0 194 30.9
BcaC03g15155 Brassica carinata HOM05D000026 ORTHO05D021647 3.3e-06 56.2 148 36.5
C03p45520 Brassica napus HOM05D007244 ORTHO05D024067 3.3e-06 56.2 191 30.9
BraA06t24270Z Brassica rapa HOM05D007244 ORTHO05D011635 7.3e-06 55.1 83 45.8
A08p17800 Brassica napus HOM05D007244 ORTHO05D028076 9.5e-06 54.7 188 33.0
C03p83090 Brassica napus HOM05D007244 ORTHO05D011635 9.5e-06 54.7 83 42.2


User provided reference genes

Program Settings