Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48273 Brassica carinata HOM05D007968 ORTHO05D024441 1.7e-51 205.7 100 100.0
BolC1t05166H Brassica oleracea HOM05D007968 ORTHO05D024441 1.7e-51 205.7 100 100.0
C01p52270 Brassica napus HOM05D007968 ORTHO05D024441 4.1e-50 201.1 100 98.0
A01p40660 Brassica napus HOM05D007968 ORTHO05D024441 7.3e-39 163.7 93 88.2
BraA01t04100Z Brassica rapa HOM05D007968 ORTHO05D024441 7.3e-39 163.7 93 88.2
BcaB06g25504 Brassica carinata HOM05D007968 ORTHO05D010203 4.0e-21 104.8 73 74.0
A05p36620 Brassica napus HOM05D007968 ORTHO05D010203 6.9e-21 104.0 73 74.0
BraA05t22464Z Brassica rapa HOM05D007968 ORTHO05D010203 6.9e-21 104.0 73 74.0
Sp3g11020 Schrenkiella parvula HOM05D007968 ORTHO05D010203 1.7e-19 99.4 71 71.8
BcaC05g29230 Brassica carinata HOM05D007968 ORTHO05D010203 2.9e-19 98.6 71 73.2
Thhalv10022116m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 2.9e-19 98.6 71 73.2
Carub.0003s1224 Capsella rubella HOM05D007968 ORTHO05D010203 9.6e-15 83.6 70 62.9
CARHR087400 Cardamine hirsuta HOM05D007968 ORTHO05D010203 2.1e-14 82.4 73 61.6
AL3G24550 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 8.1e-14 80.5 71 63.4
C05p55050 Brassica napus HOM05D007968 ORTHO05D010203 1.4e-13 79.7 50 82.0
BolC5t34173H Brassica oleracea HOM05D007968 ORTHO05D010203 1.4e-13 79.7 50 82.0
AT3G12880 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 5.8e-12 74.3 84 52.4


User provided reference genes

Program Settings