Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48146 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-42 175.6 89 100.0
A01p41870 Brassica napus HOM05D000209 ORTHO05D000129 4.2e-30 134.4 72 93.1
BcaC09g48092 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-24 116.3 55 100.0
BolC1t05399H Brassica oleracea HOM05D000209 ORTHO05D000129 1.2e-24 116.3 55 100.0
BraA01t04256Z Brassica rapa HOM05D000209 ORTHO05D000129 1.2e-24 116.3 55 100.0
BolC1t05401H Brassica oleracea HOM05D000209 ORTHO05D000129 4.5e-24 114.4 55 98.2
BcaC09g48095 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-23 113.2 55 96.4
BcaC09g48098 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-23 113.2 55 96.4
BcaB04g21210 Brassica carinata HOM05D000209 ORTHO05D000129 3.6e-21 104.8 54 90.7
BcaB03g12435 Brassica carinata HOM05D000209 ORTHO05D000129 3.0e-20 101.7 54 85.2
BcaB04g21211 Brassica carinata HOM05D000209 ORTHO05D000129 7.5e-19 97.1 55 78.2
BcaB05g22381 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-17 92.0 58 77.6
BcaB03g12436 Brassica carinata HOM05D000209 ORTHO05D000129 7.0e-17 90.5 55 70.9
BcaB04g21204 Brassica carinata HOM05D000209 ORTHO05D000129 5.9e-16 87.4 55 72.7
BolC1t05397H Brassica oleracea HOM05D000209 ORTHO05D000129 5.9e-16 87.4 55 72.7
BcaB04g18597 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-15 86.7 56 67.9
A01p41830 Brassica napus HOM05D000209 ORTHO05D000129 1.0e-15 86.7 55 70.9
BraA03t12823Z Brassica rapa HOM05D000209 ORTHO05D000129 3.8e-15 84.7 55 70.9
A01p41820 Brassica napus HOM05D000209 ORTHO05D000129 6.6e-15 84.0 55 69.1
BraA01t04254Z Brassica rapa HOM05D000209 ORTHO05D000129 6.6e-15 84.0 55 69.1
BcaC01g04180 Brassica carinata HOM05D000209 ORTHO05D000129 8.6e-15 83.6 55 69.1
BcaC09g48091 Brassica carinata HOM05D000209 ORTHO05D000129 8.6e-15 83.6 54 68.5
C03p44180 Brassica napus HOM05D000209 ORTHO05D000129 8.6e-15 83.6 55 69.1
BolC1t05398H Brassica oleracea HOM05D000209 ORTHO05D000129 8.6e-15 83.6 54 68.5
BolC3t16691H Brassica oleracea HOM05D000209 ORTHO05D000129 8.6e-15 83.6 55 69.1
BraA03t12824Z Brassica rapa HOM05D000209 ORTHO05D000129 8.6e-15 83.6 56 64.3
A01p41840 Brassica napus HOM05D000209 ORTHO05D000129 3.3e-14 81.6 72 54.2
BraA01t04255Z Brassica rapa HOM05D000209 ORTHO05D000129 5.5e-14 80.9 54 64.8
BcaB04g18599 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-13 79.3 53 67.9
BcaB04g18600 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-13 79.3 53 67.9
BcaB04g21208 Brassica carinata HOM05D000209 ORTHO05D000129 3.6e-13 78.2 55 70.9
BcaC09g48093 Brassica carinata HOM05D000209 ORTHO05D000129 3.6e-13 78.2 55 70.9
BcaB04g18601 Brassica carinata HOM05D000209 ORTHO05D000129 6.1e-13 77.4 55 60.0
BcaB04g21206 Brassica carinata HOM05D000209 ORTHO05D000129 8.0e-13 77.0 55 69.1
A03p36550 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-12 75.1 55 58.2
BcaC01g04181 Brassica carinata HOM05D000209 ORTHO05D000129 4.0e-12 74.7 53 58.5
BcaC01g04182 Brassica carinata HOM05D000209 ORTHO05D000129 4.0e-12 74.7 53 58.5
C03p44150 Brassica napus HOM05D000209 ORTHO05D000129 4.0e-12 74.7 53 58.5
C03p44170 Brassica napus HOM05D000209 ORTHO05D000129 4.0e-12 74.7 53 58.5
BolC3t16690H Brassica oleracea HOM05D000209 ORTHO05D000129 4.0e-12 74.7 53 58.5
BcaB03g15317 Brassica carinata HOM05D000209 ORTHO05D000129 5.7e-11 70.9 49 65.3
BcaB03g15318 Brassica carinata HOM05D000209 ORTHO05D000129 5.7e-11 70.9 49 65.3
BcaB03g16794 Brassica carinata HOM05D000209 ORTHO05D000129 5.7e-11 70.9 49 65.3
BcaB04g21209 Brassica carinata HOM05D000209 ORTHO05D000129 5.7e-11 70.9 49 65.3
Carub.0006s3251 Capsella rubella HOM05D000209 ORTHO05D000129 5.7e-11 70.9 54 64.8
BraA03t12821Z Brassica rapa HOM05D000209 ORTHO05D000129 7.5e-11 70.5 53 54.7
BraA03t12822Z Brassica rapa HOM05D000209 ORTHO05D000129 9.8e-11 70.1 55 56.4
BcaB04g21207 Brassica carinata HOM05D000209 ORTHO05D000129 1.3e-10 69.7 49 63.3
A03p36540 Brassica napus HOM05D000209 ORTHO05D000129 1.3e-10 69.7 53 52.8
Carub.0006s3242 Capsella rubella HOM05D000209 ORTHO05D000129 2.8e-10 68.6 54 63.0
AT3G10430 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.7e-10 68.2 45 73.3
A05p00430 Brassica napus HOM05D000209 ORTHO05D000129 3.7e-10 68.2 53 50.9
BraA05t19041Z Brassica rapa HOM05D000209 ORTHO05D000129 3.7e-10 68.2 53 50.9
AT3G08750 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.9e-10 67.8 55 56.4
CARHR099050 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.9e-10 67.8 46 69.6
C03p44140 Brassica napus HOM05D000209 ORTHO05D000129 8.3e-10 67.0 55 54.5
BolC3t16689H Brassica oleracea HOM05D000209 ORTHO05D000129 8.3e-10 67.0 55 54.5
CARHR084930 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.3e-10 67.0 54 59.3
BcaB01g05955 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-09 66.6 54 57.4
C03p02690 Brassica napus HOM05D000209 ORTHO05D000129 1.1e-09 66.6 54 57.4
C03p02670 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-09 65.5 56 53.6
BcaB01g05954 Brassica carinata HOM05D000209 ORTHO05D000129 3.1e-09 65.1 56 53.6
BolC3t12821H Brassica oleracea HOM05D000209 ORTHO05D000129 3.1e-09 65.1 56 53.6
BolC3t12823H Brassica oleracea HOM05D000209 ORTHO05D000129 3.1e-09 65.1 54 55.6
BraA03t09598Z Brassica rapa HOM05D000209 ORTHO05D000129 3.1e-09 65.1 56 51.8
Carub.0006s3259 Capsella rubella HOM05D000209 ORTHO05D000129 3.1e-09 65.1 54 61.1
BcaC05g29467 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-09 64.7 55 60.0
C05p57730 Brassica napus HOM05D000209 ORTHO05D000129 4.1e-09 64.7 55 60.0
BolC5t34430H Brassica oleracea HOM05D000209 ORTHO05D000129 4.1e-09 64.7 55 60.0
CARHR044120 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.1e-09 64.7 50 62.0
C03p54080 Brassica napus HOM05D000209 ORTHO05D000129 5.4e-09 64.3 54 57.4
BolC3t17700H Brassica oleracea HOM05D000209 ORTHO05D000129 5.4e-09 64.3 54 57.4
Thhalv10022403m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.0e-09 63.9 54 59.3
A02p13030 Brassica napus HOM05D000209 ORTHO05D000129 9.2e-09 63.5 56 53.6
BraA02t06359Z Brassica rapa HOM05D000209 ORTHO05D000129 9.2e-09 63.5 56 53.6
AT4G04690 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.2e-08 63.2 54 55.6
Carub.0003s0964 Capsella rubella HOM05D000209 ORTHO05D000129 1.6e-08 62.8 43 62.8
BolC7t45354H Brassica oleracea HOM05D000209 ORTHO05D000129 2.0e-08 62.4 54 53.7
BolC7t45357H Brassica oleracea HOM05D000209 ORTHO05D000129 2.0e-08 62.4 54 53.7
A03p50240 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-08 62.0 54 53.7
C07p48430 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-08 62.0 54 53.7
C03p44190 Brassica napus HOM05D003728 ORTHO05D000007 4.5e-08 61.2 41 61.0
BcaB01g05926 Brassica carinata HOM05D000209 ORTHO05D000129 5.9e-08 60.8 54 57.4
C07p48490 Brassica napus HOM05D000209 ORTHO05D000129 5.9e-08 60.8 54 51.9
BolC3t12782H Brassica oleracea HOM05D000209 ORTHO05D000129 5.9e-08 60.8 54 57.4
A03p01940 Brassica napus HOM05D000209 ORTHO05D000129 7.8e-08 60.5 54 57.4
BraA03t09563Z Brassica rapa HOM05D000209 ORTHO05D000129 7.8e-08 60.5 54 57.4
C02p21150 Brassica napus HOM05D000209 ORTHO05D000129 2.3e-07 58.9 48 50.0
Carub.0006s3257 Capsella rubella HOM05D000209 ORTHO05D000129 2.3e-07 58.9 56 55.4
Sp3g20410 Schrenkiella parvula HOM05D000209 ORTHO05D000129 2.3e-07 58.9 54 55.6
Carub.0003s2280 Capsella rubella HOM05D000209 ORTHO05D000129 2.9e-07 58.5 57 50.9
Thhalv10024004m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.9e-07 58.5 56 48.2
CARHR098530 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.9e-07 58.2 54 53.7
BcaC05g26845 Brassica carinata HOM05D000209 ORTHO05D000129 6.6e-07 57.4 46 50.0
C05p27250 Brassica napus HOM05D000209 ORTHO05D000129 6.6e-07 57.4 46 50.0
BolC5t31439H Brassica oleracea HOM05D000209 ORTHO05D000129 6.6e-07 57.4 46 50.0
Carub.0003s2144 Capsella rubella HOM05D000209 ORTHO05D000129 6.6e-07 57.4 43 58.1
Aa31LG8G9170 Aethionema arabicum HOM05D000209 ORTHO05D000129 8.6e-07 57.0 54 53.7
AT3G22650 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.6e-07 57.0 57 50.9
AL3G42560 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.1e-06 56.6 46 52.2
A09p33130 Brassica napus HOM05D000209 ORTHO05D000129 1.1e-06 56.6 46 50.0
BraA09t38858Z Brassica rapa HOM05D000209 ORTHO05D000129 1.1e-06 56.6 46 50.0
AT1G77650 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.5e-06 56.2 43 58.1
AT3G21410 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.5e-06 56.2 77 40.3
Carub.0002s0776 Capsella rubella HOM05D000209 ORTHO05D000129 1.5e-06 56.2 44 52.3
Thhalv10000601m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.5e-06 56.2 55 50.9
BcaC09g49177 Brassica carinata HOM05D000209 ORTHO05D000129 1.9e-06 55.8 45 57.8
C01p41780 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-06 55.8 45 57.8
BolC1t04133H Brassica oleracea HOM05D000209 ORTHO05D000129 1.9e-06 55.8 45 57.8
Carub.0003s0962 Capsella rubella HOM05D000209 ORTHO05D000129 1.9e-06 55.8 44 56.8
BcaC03g14676 Brassica carinata HOM05D000209 ORTHO05D000129 2.5e-06 55.5 56 48.2
A01p32620 Brassica napus HOM05D000209 ORTHO05D000129 2.5e-06 55.5 45 55.6
BolC2t08255H Brassica oleracea HOM05D000209 ORTHO05D000129 2.5e-06 55.5 56 48.2
BraA01t03390Z Brassica rapa HOM05D000209 ORTHO05D000129 2.5e-06 55.5 45 55.6
AT3G22700 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.3e-06 55.1 46 50.0
Aa31LG8G9220 Aethionema arabicum HOM05D000209 ORTHO05D000129 4.3e-06 54.7 54 51.9
AL3G42550 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.3e-06 54.7 46 52.2
Thhalv10026802m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.3e-06 54.7 55 47.3
AL3G35490 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.3e-06 53.9 54 50.0
Aa31LG8G9200 Aethionema arabicum HOM05D000209 ORTHO05D000129 9.5e-06 53.5 45 51.1
BcaB03g14653 Brassica carinata HOM05D000209 ORTHO05D000129 9.5e-06 53.5 46 50.0


User provided reference genes

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