Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48121 Brassica carinata HOM05D061184 ORTHO05D000002 7.0e-284 979.9 492 100.0
ClCG03G010050 Citrullus lanatus HOM05D016213 ORTHO05D000002 2.8e-14 84.3 151 25.2
CANSAT35G0070 Cannabis sativa HOM05D000004 ORTHO05D000002 5.2e-13 80.1 183 28.4
CANSAT54G0404 Cannabis sativa HOM05D000004 ORTHO05D000002 5.2e-13 80.1 165 26.7
TWI15G0520 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.3e-11 75.5 160 26.2
AL6G32420 Arabidopsis lyrata HOM05D008905 ORTHO05D000002 1.7e-11 75.1 148 29.1
ClCG09G014290 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.2e-11 74.7 151 25.8
Phvul.001G091900 Phaseolus vulgaris HOM05D003122 ORTHO05D000002 3.7e-11 73.9 271 24.7
ClCG03G010070 Citrullus lanatus HOM05D000004 ORTHO05D000002 8.4e-11 72.8 143 30.8
THA.LOC104798668 Tarenaya hassleriana HOM05D008905 ORTHO05D000002 8.4e-11 72.8 220 27.7
ClCG03G009890 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.4e-10 71.2 148 23.6
COL.COLO4_04208 Corchorus olitorius HOM05D037185 ORTHO05D000002 3.2e-10 70.9 276 23.6
SHI09204 Sapria himalayana HOM05D000004 ORTHO05D000002 3.2e-10 70.9 104 36.5
SHI22929 Sapria himalayana HOM05D000004 ORTHO05D000048 5.4e-10 70.1 169 33.7
Sp3g28830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 5.4e-10 70.1 276 24.6
TPR.G20516 Trifolium pratense HOM05D003122 ORTHO05D000002 7.1e-10 69.7 154 26.6
Psat7g152800 Pisum sativum HOM05D000004 ORTHO05D000002 9.2e-10 69.3 113 37.2
MELO3C027823.2 Cucumis melo HOM05D000004 ORTHO05D000002 1.2e-09 68.9 95 40.0
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-09 68.9 221 26.2
ClCG09G015910 Citrullus lanatus HOM05D023487 ORTHO05D034708 1.6e-09 68.6 127 26.0
CsaV3_UNG239520 Cucumis sativus L. HOM05D000004 ORTHO05D000002 1.6e-09 68.6 99 37.4
CsaV3_UNG222510 Cucumis sativus L. HOM05D000004 ORTHO05D000002 2.1e-09 68.2 97 38.1
VMungo0251G2087 Vigna mungo HOM05D009527 ORTHO05D010195 2.1e-09 68.2 110 34.5
Lalb_Chr12g0204601 Lupinus albus HOM05D003122 ORTHO05D000002 2.7e-09 67.8 153 26.1
Psat2g032840 Pisum sativum HOM05D000004 ORTHO05D000002 2.7e-09 67.8 324 22.5
Sp6g11810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.7e-09 67.8 171 22.8
ECA232G0982 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.5e-09 67.4 347 20.7
Ca_07114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 4.6e-09 67.0 153 27.5
COL.COLO4_06470 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.6e-09 67.0 160 26.2
ECA234G4583 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.6e-09 67.0 264 24.6
TPR.G21966 Trifolium pratense HOM05D001021 ORTHO05D000894 4.6e-09 67.0 164 26.8
COL.COLO4_12903 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.0e-09 66.6 265 22.3
Sp1g30880 Schrenkiella parvula HOM05D000004 ORTHO05D036776 6.0e-09 66.6 106 34.0
THA.LOC104803465 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.0e-09 66.6 94 38.3
Psat5g137600 Pisum sativum HOM05D000004 ORTHO05D000002 7.8e-09 66.2 151 29.1
Sp6g11780 Schrenkiella parvula HOM05D011239 ORTHO05D000002 7.8e-09 66.2 151 24.5
THA.LOC104809111 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.8e-09 66.2 248 25.4
CANSAT54G0535 Cannabis sativa HOM05D000004 ORTHO05D000002 1.0e-08 65.9 168 20.2
ClCG06G010650 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.0e-08 65.9 128 26.6
FvH4_3g30933 Fragaria vesca HOM05D000004 ORTHO05D000002 1.0e-08 65.9 101 31.7
ECA236G3521 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-08 65.5 154 26.6
HanXRQChr05g0142391 Helianthus annuus HOM05D003122 ORTHO05D000002 1.3e-08 65.5 177 24.9
AL4G20520 Arabidopsis lyrata HOM05D061184 ORTHO05D000002 1.7e-08 65.1 58 53.4
CARHR263960 Cardamine hirsuta HOM05D008905 ORTHO05D000002 1.7e-08 65.1 162 26.5
THA.LOC104814705 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.7e-08 65.1 92 37.0
Carub.0001s3392 Capsella rubella HOM05D000004 ORTHO05D000002 2.3e-08 64.7 224 22.8
CAN.G449.38 Capsicum annuum HOM05D000004 ORTHO05D000002 3.0e-08 64.3 92 40.2
Sp4g05780 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.9e-08 63.9 156 25.6
COL.COLO4_20202 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.1e-08 63.5 177 24.3
MELO3C028848.2 Cucumis melo HOM05D009641 ORTHO05D013069 6.6e-08 63.2 69 34.8
Psat5g243560 Pisum sativum HOM05D000004 ORTHO05D000002 6.6e-08 63.2 101 34.7
ClCG09G014300 Citrullus lanatus HOM05D000004 ORTHO05D000002 8.6e-08 62.8 101 35.6
Psat0s3835g0040 Pisum sativum HOM05D000004 ORTHO05D000002 8.6e-08 62.8 158 27.2
Psat1g012480 Pisum sativum HOM05D000004 ORTHO05D000002 8.6e-08 62.8 148 25.0
Sp2g06690 Schrenkiella parvula HOM05D008905 ORTHO05D000002 8.6e-08 62.8 171 25.1
Solyc12g062824.1 Solanum lycopersicum HOM05D000004 ORTHO05D000002 8.6e-08 62.8 101 36.6
VMungo1080G1902 Vigna mungo HOM05D000054 ORTHO05D010195 8.6e-08 62.8 149 28.9
Ciclev10030074m.g Citrus clementina HOM05D000004 ORTHO05D000002 1.1e-07 62.4 156 25.0
Psat2g059760 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-07 62.4 192 23.4
RcHm_v2.0_Chr5g0078051 Rosa chinensis HOM05D000004 ORTHO05D000002 1.1e-07 62.4 101 35.6
Thhalv10003066m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 1.5e-07 62.0 204 23.5
THA.LOC104815241 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.5e-07 62.0 92 32.6
ECA236G0535 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-07 61.6 101 34.7
Nn1g03655 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.9e-07 61.6 68 45.6
Sed0013504 Sechium edule HOM05D000004 ORTHO05D000002 1.9e-07 61.6 108 30.6
Manes.03G212950 Manihot esculenta HOM05D003122 ORTHO05D000002 2.5e-07 61.2 219 22.8
ECA234G3749 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-07 60.8 130 24.6
PSO063G4010 Papaver somniferum HOM05D000004 ORTHO05D000002 3.3e-07 60.8 319 23.5
PSO675G1874 Papaver somniferum HOM05D000004 ORTHO05D000002 3.3e-07 60.8 84 34.5
Phvul.004G009341 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 3.3e-07 60.8 95 35.8
SHI25069 Sapria himalayana HOM05D000004 ORTHO05D000002 3.3e-07 60.8 129 27.1
VMungo0251G0341 Vigna mungo HOM05D000660 ORTHO05D010195 3.3e-07 60.8 101 33.7
VMungo0251G3700 Vigna mungo HOM05D003122 ORTHO05D000002 3.3e-07 60.8 153 24.2
Ah.02g117930 Amaranthus hybridus HOM05D016549 ORTHO05D000002 4.3e-07 60.5 81 32.1
CAN.G1343.11 Capsicum annuum HOM05D000004 ORTHO05D000002 4.3e-07 60.5 37 64.9
MELO3C002493.2 Cucumis melo HOM05D000004 ORTHO05D000002 4.3e-07 60.5 166 25.9
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.3e-07 60.5 195 23.1
Psat0s1551g0120 Pisum sativum HOM05D000004 ORTHO05D000002 4.3e-07 60.5 226 26.1
Psat3g197960 Pisum sativum HOM05D000004 ORTHO05D000002 4.3e-07 60.5 226 26.1
ECA240G1063 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.6e-07 60.1 92 34.8
RcHm_v2.0_Chr6g0286171 Rosa chinensis HOM05D000004 ORTHO05D000002 5.6e-07 60.1 89 32.6
Sed0022134 Sechium edule HOM05D000004 ORTHO05D000002 5.6e-07 60.1 316 21.5
VMungo1383G2683 Vigna mungo HOM05D003122 ORTHO05D000002 5.6e-07 60.1 153 26.1
CAN.G679.4 Capsicum annuum HOM05D000004 ORTHO05D000002 7.3e-07 59.7 91 38.5
Ca_12114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 7.3e-07 59.7 73 39.7
PSO017G2829 Papaver somniferum HOM05D000004 ORTHO05D000002 7.3e-07 59.7 87 35.6
Psat1g202520 Pisum sativum HOM05D000004 ORTHO05D000002 7.3e-07 59.7 145 33.8
SpUn0001_0220 Schrenkiella parvula HOM05D008905 ORTHO05D000002 7.3e-07 59.7 243 23.9
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 7.3e-07 59.7 96 31.2
Ca_27173_v3 Cicer arietinum L. HOM05D009527 ORTHO05D013850 9.6e-07 59.3 83 34.9
Ca_27418_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 9.6e-07 59.3 253 22.5
ECA232G0044 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.6e-07 59.3 170 23.5
ECA232G0168 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.6e-07 59.3 187 24.1
ECA232G1890 Erigeron canadensis HOM05D000004 ORTHO05D000048 9.6e-07 59.3 92 32.6
ECA247G3996 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.6e-07 59.3 215 23.3
Psat3g064840 Pisum sativum HOM05D000004 ORTHO05D000002 9.6e-07 59.3 210 23.3
Psat4g107520 Pisum sativum HOM05D000004 ORTHO05D000002 9.6e-07 59.3 129 29.5
Sp6g10890 Schrenkiella parvula HOM05D010891 ORTHO05D014503 9.6e-07 59.3 107 37.4
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 9.6e-07 59.3 151 27.2
ClCG08G000590 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.2e-06 58.9 143 29.4
ECA233G5755 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-06 58.9 150 24.7
PSO832G2085 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-06 58.9 76 34.2
Psat7g007480 Pisum sativum HOM05D000004 ORTHO05D000002 1.2e-06 58.9 103 36.9
SHI44582 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-06 58.9 151 27.2
THA.LOC104801707 Tarenaya hassleriana HOM05D008905 ORTHO05D000002 1.2e-06 58.9 81 33.3
COL.COLO4_28963 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.6e-06 58.5 283 22.6
CsaV3_1G011190 Cucumis sativus L. HOM05D000004 ORTHO05D000002 1.6e-06 58.5 166 24.1
Psat3g172640 Pisum sativum HOM05D000028 ORTHO05D000390 1.6e-06 58.5 93 36.6
Psat6g208920 Pisum sativum HOM05D000004 ORTHO05D000002 1.6e-06 58.5 318 23.6
Sopen04g022550 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-06 58.5 98 31.6
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 1.6e-06 58.5 81 34.6
BcaC02g11045 Brassica carinata HOM05D014061 ORTHO05D000002 2.1e-06 58.2 191 24.6
Ca_05816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.1e-06 58.2 153 24.8
ECA238G2583 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-06 58.2 88 31.8
Lj2C174T26 Lonicera japonica HOM05D000004 ORTHO05D000002 2.1e-06 58.2 169 25.4
Psat0s3433g0040 Pisum sativum HOM05D000004 ORTHO05D000002 2.1e-06 58.2 227 23.3
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.8e-06 57.8 176 25.6
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 2.8e-06 57.8 246 23.2
SHI01980 Sapria himalayana HOM05D000004 ORTHO05D000002 2.8e-06 57.8 74 35.1
Sp3g28500 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.8e-06 57.8 143 25.2
VMungo0251G0994 Vigna mungo HOM05D002797 ORTHO05D010195 2.8e-06 57.8 69 42.0
ECA233G5891 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-06 57.4 338 18.9
PSO170G5011 Papaver somniferum HOM05D000004 ORTHO05D000002 3.6e-06 57.4 52 44.2
PSO384G4771 Papaver somniferum HOM05D000004 ORTHO05D000002 3.6e-06 57.4 87 34.5
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 3.6e-06 57.4 81 33.3
SHI16682 Sapria himalayana HOM05D000004 ORTHO05D000002 3.6e-06 57.4 116 31.0
SHI47644 Sapria himalayana HOM05D000004 ORTHO05D000002 3.6e-06 57.4 79 36.7
TPR.G24187 Trifolium pratense HOM05D000004 ORTHO05D000002 3.6e-06 57.4 92 37.0
Ca_12127_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.7e-06 57.0 69 37.7
Ca_14682_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 4.7e-06 57.0 124 29.8
Psat3g181800 Pisum sativum HOM05D000004 ORTHO05D000002 4.7e-06 57.0 171 22.2
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 4.7e-06 57.0 478 20.1
VMungo1383G1247 Vigna mungo HOM05D000402 ORTHO05D010195 4.7e-06 57.0 252 27.4
Ah.02g124620 Amaranthus hybridus HOM05D013246 ORTHO05D000002 6.2e-06 56.6 172 22.7
ECA042G0002 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.2e-06 56.6 101 33.7
Psat0s3577g0080 Pisum sativum HOM05D000004 ORTHO05D000002 6.2e-06 56.6 99 34.3
Psat1g137400 Pisum sativum HOM05D000004 ORTHO05D000002 6.2e-06 56.6 95 28.4
Psat1g201560 Pisum sativum HOM05D000004 ORTHO05D000002 6.2e-06 56.6 274 21.5
VMungo1127G2266 Vigna mungo HOM05D009527 ORTHO05D010195 6.2e-06 56.6 83 34.9
Ah.09g237740 Amaranthus hybridus HOM05D016549 ORTHO05D000002 8.1e-06 56.2 72 33.3
CsaV3_5G037150 Cucumis sativus L. HOM05D016213 ORTHO05D000002 8.1e-06 56.2 131 23.7
ECA234G4714 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.1e-06 56.2 322 20.2
ECA238G3110 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.1e-06 56.2 165 23.6
PSO017G2622 Papaver somniferum HOM05D000004 ORTHO05D000002 8.1e-06 56.2 98 28.6


User provided reference genes

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