Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48066 Brassica carinata HOM05D014782 ORTHO05D031875 3.8e-87 324.7 155 100.0
BolC2t09475H Brassica oleracea HOM05D014782 ORTHO05D031875 8.1e-53 210.7 137 75.9
BolC9t55026H Brassica oleracea HOM05D014782 ORTHO05D031875 4.0e-44 181.8 135 68.9
AL3G53020 Arabidopsis lyrata HOM05D004893 ORTHO05D006320 1.1e-12 77.4 117 47.0
Carub.0003s3314 Capsella rubella HOM05D004893 ORTHO05D006320 1.4e-12 77.0 117 47.0
BcaC06g36488 Brassica carinata HOM05D004893 ORTHO05D006320 1.8e-12 76.6 117 47.0
C07p03690 Brassica napus HOM05D004893 ORTHO05D006320 1.8e-12 76.6 117 47.0
BolC7t40765H Brassica oleracea HOM05D004893 ORTHO05D006320 1.8e-12 76.6 117 47.0
A07p01760 Brassica napus HOM05D004893 ORTHO05D006320 2.4e-12 76.3 117 47.0
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 2.4e-12 76.3 117 47.0
CARHR109460 Cardamine hirsuta HOM05D004893 ORTHO05D006320 2.4e-12 76.3 101 50.5
Sp3g32370 Schrenkiella parvula HOM05D004893 ORTHO05D006320 3.1e-12 75.9 132 42.4
BcaB03g16682 Brassica carinata HOM05D004893 ORTHO05D006320 4.1e-12 75.5 117 46.2
AT2G18900 Arabidopsis thaliana HOM05D004893 ORTHO05D006320 5.3e-12 75.1 117 46.2
BcaB07g31639 Brassica carinata HOM05D004893 ORTHO05D006320 3.4e-11 72.4 109 45.0
Thhalv10022562m.g Eutrema salsugineum HOM05D004893 ORTHO05D006320 4.6e-08 62.0 34 85.3
BolC4t24186H Brassica oleracea HOM05D042919 ORTHO05D033128 7.9e-08 61.2 72 54.2
Aa31LG8G15990 Aethionema arabicum HOM05D004893 ORTHO05D006320 1.8e-07 60.1 42 69.0
Glyma.13G097400 Glycine max HOM05D004893 ORTHO05D006320 2.3e-07 59.7 119 37.0
QL02p098221 Quercus lobata HOM05D004893 ORTHO05D006320 3.0e-07 59.3 39 64.1
RcHm_v2.0_Chr4g0401591 Rosa chinensis HOM05D004893 ORTHO05D006320 6.7e-07 58.2 37 70.3
FAN12G2097 Fragaria x ananassa HOM05D004893 ORTHO05D006320 8.8e-07 57.8 37 67.6
FAN17G0276 Fragaria x ananassa HOM05D004893 ORTHO05D006320 8.8e-07 57.8 37 67.6
FAN22G1078 Fragaria x ananassa HOM05D004893 ORTHO05D006320 8.8e-07 57.8 37 67.6
Glyma.17G062200 Glycine max HOM05D004893 ORTHO05D006320 8.8e-07 57.8 119 36.1
CiPaw.08G035400 Carya illinoinensis HOM05D004893 ORTHO05D006320 1.5e-06 57.0 37 62.2
Ciclev10007405m.g Citrus clementina HOM05D004893 ORTHO05D006320 2.5e-06 56.2 42 57.1
Potri.006G166500 Populus trichocarpa HOM05D004893 ORTHO05D006320 2.5e-06 56.2 122 33.6
Prupe.1G084200 Prunus persica HOM05D004893 ORTHO05D006320 2.5e-06 56.2 37 64.9
CsaV3_1G031710 Cucumis sativus L. HOM05D004893 ORTHO05D006320 3.3e-06 55.8 44 63.6
MELO3C017452.2 Cucumis melo HOM05D004893 ORTHO05D006320 4.3e-06 55.5 44 61.4
FvH4_4g07920 Fragaria vesca HOM05D004893 ORTHO05D006320 4.3e-06 55.5 37 64.9
Atru.chr13.1778 Acer truncatum HOM05D004893 ORTHO05D006320 5.7e-06 55.1 37 62.2
Atru.chr7.881 Acer truncatum HOM05D004893 ORTHO05D006320 5.7e-06 55.1 37 62.2
Actinidia07346 Actinidia chinensis HOM05D004893 ORTHO05D006320 5.7e-06 55.1 39 66.7
Cfa010313 Carpinus fangiana HOM05D004893 ORTHO05D006320 5.7e-06 55.1 39 56.4
Cfa013310 Carpinus fangiana HOM05D004893 ORTHO05D006320 5.7e-06 55.1 39 56.4
Haze_03433 Corylus avellana HOM05D004893 ORTHO05D006320 5.7e-06 55.1 39 56.4
Potri.018G091100 Populus trichocarpa HOM05D004893 ORTHO05D006320 5.7e-06 55.1 31 71.0
GSVIVG01030738001 Vitis vinifera HOM05D004893 ORTHO05D006320 5.7e-06 55.1 37 64.9
Ca_21236_v3 Cicer arietinum L. HOM05D004893 ORTHO05D006320 7.4e-06 54.7 37 64.9
FAN07G0898 Fragaria x ananassa HOM05D004893 ORTHO05D006320 7.4e-06 54.7 37 64.9
Manes.06G023100 Manihot esculenta HOM05D004893 ORTHO05D006320 7.4e-06 54.7 32 71.9
TPR.G5437 Trifolium pratense HOM05D004893 ORTHO05D006320 7.4e-06 54.7 39 61.5
Duzib150G0781 Durio zibethinus HOM05D004893 ORTHO05D006320 9.7e-06 54.3 36 61.1
ECA240G4652 Erigeron canadensis HOM05D004893 ORTHO05D006320 9.7e-06 54.3 39 64.1
VMungo1215G1808 Vigna mungo HOM05D004893 ORTHO05D006320 9.7e-06 54.3 154 31.2


User provided reference genes

Program Settings