Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48023 Brassica carinata HOM05D007244 ORTHO05D011635 1.1e-240 836.3 450 100.0
BraA02t05281Z Brassica rapa HOM05D007244 ORTHO05D027899 5.8e-43 179.5 409 37.4
BcaC02g11343 Brassica carinata HOM05D007244 ORTHO05D021589 8.4e-42 175.6 432 36.3
BcaB06g28967 Brassica carinata HOM05D007244 ORTHO05D021589 7.1e-41 172.6 423 36.9
A07p33680 Brassica napus HOM05D000496 ORTHO05D000411 6.0e-40 169.5 400 39.0
C03p76090 Brassica napus HOM05D007244 ORTHO05D027899 1.3e-37 161.8 399 35.1
BraA08t34457Z Brassica rapa HOM05D007244 ORTHO05D040510 2.6e-35 154.1 400 33.8
C04p63540 Brassica napus HOM05D007244 ORTHO05D040510 3.4e-35 153.7 400 33.8
BolC2t07388H Brassica oleracea HOM05D000496 ORTHO05D000411 1.3e-34 151.8 390 35.4
C09p64410 Brassica napus HOM05D007244 ORTHO05D000411 1.7e-34 151.4 418 34.4
BNapus_Darmor_BZH_scaffold_167p00080 Brassica napus HOM05D000496 ORTHO05D000411 3.2e-33 147.1 354 38.1
BcaC02g09016 Brassica carinata HOM05D001292 ORTHO05D001202 7.1e-33 146.0 389 34.4
BraA09t35781Z Brassica rapa HOM05D007244 ORTHO05D033844 1.6e-32 144.8 429 31.0
A08p17800 Brassica napus HOM05D007244 ORTHO05D028076 6.0e-32 142.9 412 33.5
BcaC02g09020 Brassica carinata HOM05D001292 ORTHO05D001202 8.7e-31 139.0 404 33.2
A04p29850 Brassica napus HOM05D007244 ORTHO05D028076 1.5e-30 138.3 414 33.1
BraA04t18445Z Brassica rapa HOM05D007244 ORTHO05D028076 1.5e-30 138.3 414 33.1
BraA03t12268Z Brassica rapa HOM05D007244 ORTHO05D033844 3.6e-29 133.7 430 32.1
A05p03870 Brassica napus HOM05D007244 ORTHO05D027185 6.2e-29 132.9 312 34.9
BolC7t40578H Brassica oleracea HOM05D007244 ORTHO05D028076 3.4e-27 127.1 301 33.2
C02p37770 Brassica napus HOM05D007244 ORTHO05D015497 2.2e-26 124.4 337 34.4
BolC6t35250H Brassica oleracea HOM05D007244 ORTHO05D015497 8.4e-26 122.5 411 31.4
C03p14600 Brassica napus HOM05D000496 ORTHO05D000411 5.4e-25 119.8 275 38.5
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 2.7e-24 117.5 410 33.7
BolC3t14675H Brassica oleracea HOM05D007244 ORTHO05D011635 2.7e-24 117.5 309 34.6
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 2.7e-24 117.5 410 33.7
BolC4t25533H Brassica oleracea HOM05D000496 ORTHO05D000411 1.3e-21 108.6 323 33.1
C04p17430 Brassica napus HOM05D007244 ORTHO05D021589 2.6e-19 100.9 226 35.0
C04p39440 Brassica napus HOM05D007244 ORTHO05D011635 2.6e-19 100.9 198 41.4
C04p39410 Brassica napus HOM05D007244 ORTHO05D011635 1.0e-18 99.0 198 40.4
C04p72950 Brassica napus HOM05D007244 ORTHO05D011635 1.7e-18 98.2 214 44.4
A06p08650 Brassica napus HOM05D007244 ORTHO05D011635 3.8e-18 97.1 182 43.4
BcaC01g06431 Brassica carinata HOM05D000501 ORTHO05D000376 1.1e-17 95.5 199 35.7
BcaC02g06995 Brassica carinata HOM05D007244 ORTHO05D021589 1.1e-17 95.5 264 35.6
C03p45520 Brassica napus HOM05D007244 ORTHO05D024067 1.9e-17 94.7 201 42.8
BraA08t33378Z Brassica rapa HOM05D007244 ORTHO05D011709 4.2e-17 93.6 328 29.3
A02p36210 Brassica napus HOM05D007244 ORTHO05D042440 1.2e-16 92.0 303 36.3
A03p24790 Brassica napus HOM05D000496 ORTHO05D000411 3.5e-16 90.5 60 71.7
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 4.6e-16 90.1 263 36.9
C06p19100 Brassica napus HOM05D007244 ORTHO05D011635 4.6e-16 90.1 282 29.4
BolC5t31512H Brassica oleracea HOM05D007244 ORTHO05D015497 4.6e-16 90.1 138 43.5
BolC4t27724H Brassica oleracea HOM05D007244 ORTHO05D027097 6.0e-16 89.7 401 28.7
A04p30590 Brassica napus HOM05D007244 ORTHO05D015497 2.3e-15 87.8 323 31.0
BolC3t20591H Brassica oleracea HOM05D007244 ORTHO05D011635 8.7e-15 85.9 157 38.9
BolC4t22147H Brassica oleracea HOM05D007244 ORTHO05D015497 8.7e-15 85.9 59 64.4
BcaC04g23357 Brassica carinata HOM05D002074 ORTHO05D002164 1.1e-14 85.5 55 67.3
BcaNung02915 Brassica carinata HOM05D001738 ORTHO05D001644 1.1e-14 85.5 187 41.7
BolC8t48551H Brassica oleracea HOM05D007244 ORTHO05D011635 2.5e-14 84.3 195 37.9
C04p05140 Brassica napus HOM05D007244 ORTHO05D011635 3.3e-14 84.0 178 41.6
BolC7t40576H Brassica oleracea HOM05D007244 ORTHO05D039184 3.3e-14 84.0 382 30.4
BolC8t48999H Brassica oleracea HOM05D007244 ORTHO05D011635 3.3e-14 84.0 232 35.3
BolC8t49580H Brassica oleracea HOM05D007244 ORTHO05D027899 4.3e-14 83.6 159 40.9
BcaB07g32388 Brassica carinata HOM05D000777 ORTHO05D000595 5.7e-14 83.2 148 39.2
BcaC06g36660 Brassica carinata HOM05D007244 ORTHO05D039184 1.6e-13 81.6 259 31.3
C08p13580 Brassica napus HOM05D000904 ORTHO05D006931 2.1e-13 81.3 232 35.3
BolC7t45144H Brassica oleracea HOM05D007244 ORTHO05D042440 2.8e-13 80.9 303 35.6
C03p03260 Brassica napus HOM05D007244 ORTHO05D015497 3.7e-13 80.5 61 55.7
C06p04460 Brassica napus HOM05D007244 ORTHO05D015497 3.7e-13 80.5 58 60.3
BolC4t22886H Brassica oleracea HOM05D007244 ORTHO05D015497 3.7e-13 80.5 111 41.4
BolC3t14156H Brassica oleracea HOM05D007244 ORTHO05D015497 8.2e-13 79.3 114 41.2
BolC9t55947H Brassica oleracea HOM05D002126 ORTHO05D002195 8.2e-13 79.3 316 29.7
BolC3t21246H Brassica oleracea HOM05D007244 ORTHO05D024067 1.1e-12 79.0 154 38.3
C03p83090 Brassica napus HOM05D007244 ORTHO05D011635 1.4e-12 78.6 92 48.9
BolC1t04930H Brassica oleracea HOM05D007244 ORTHO05D024067 2.4e-12 77.8 152 41.4
BcaC03g17553 Brassica carinata HOM05D000055 ORTHO05D093663 3.1e-12 77.4 188 39.9
C08p19570 Brassica napus HOM05D007244 ORTHO05D027899 4.1e-12 77.0 260 31.2
BraA06t27694Z Brassica rapa HOM05D007244 ORTHO05D027097 5.3e-12 76.6 362 27.1
BraA10t42654Z Brassica rapa HOM05D007244 ORTHO05D024067 6.9e-12 76.3 156 37.8
BcaC01g04059 Brassica carinata HOM05D007244 ORTHO05D024067 9.0e-12 75.9 152 44.7
BcaC06g30752 Brassica carinata HOM05D007244 ORTHO05D039411 9.0e-12 75.9 97 46.4
BolC7t44466H Brassica oleracea HOM05D007244 ORTHO05D039411 9.0e-12 75.9 97 46.4
BolC4t27676H Brassica oleracea HOM05D007244 ORTHO05D011635 1.2e-11 75.5 205 33.7
BcaC03g17567 Brassica carinata HOM05D009169 ORTHO05D011621 1.5e-11 75.1 110 48.2
BolC4t23641H Brassica oleracea HOM05D007244 ORTHO05D011635 2.0e-11 74.7 166 40.4
BolC6t35262H Brassica oleracea HOM05D007244 ORTHO05D027097 2.0e-11 74.7 152 33.6
BcaC05g28718 Brassica carinata HOM05D007244 ORTHO05D011635 4.5e-11 73.6 111 45.0
A02p24840 Brassica napus HOM05D007244 ORTHO05D024493 4.5e-11 73.6 44 75.0
C03p17430 Brassica napus HOM05D007244 ORTHO05D021882 5.8e-11 73.2 169 38.5
C06p49860 Brassica napus HOM05D007244 ORTHO05D011635 5.8e-11 73.2 175 36.0
BcaC03g14048 Brassica carinata HOM05D007244 ORTHO05D000411 7.6e-11 72.8 132 42.4
BcaC07g41124 Brassica carinata HOM05D000249 ORTHO05D000206 1.3e-10 72.0 248 30.6
BolC5t29837H Brassica oleracea HOM05D007244 ORTHO05D021589 3.8e-10 70.5 161 32.9
BolC7t41136H Brassica oleracea HOM05D045479 ORTHO05D042432 3.8e-10 70.5 230 36.1
C03p08760 Brassica napus HOM05D007244 ORTHO05D021882 5.0e-10 70.1 169 37.3
BcaB07g33891 Brassica carinata HOM05D007244 ORTHO05D011635 6.5e-10 69.7 94 45.7
A05p43470 Brassica napus HOM05D007244 ORTHO05D033750 8.4e-10 69.3 237 34.2
BraA07t31383Z Brassica rapa HOM05D007244 ORTHO05D033750 8.4e-10 69.3 237 34.2
C08p13350 Brassica napus HOM05D013597 ORTHO05D017540 1.1e-09 68.9 161 34.8
BolC5t33793H Brassica oleracea HOM05D007244 ORTHO05D032887 1.1e-09 68.9 159 42.1
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 2.5e-09 67.8 407 24.3
BcaB04g20713 Brassica carinata HOM05D007244 ORTHO05D011635 3.2e-09 67.4 216 37.5
BcaC09g48319 Brassica carinata HOM05D007244 ORTHO05D027185 3.2e-09 67.4 171 36.8
BolC6t35336H Brassica oleracea HOM05D007244 ORTHO05D011635 4.2e-09 67.0 138 35.5
BolC6t35576H Brassica oleracea HOM05D007244 ORTHO05D015497 4.2e-09 67.0 231 30.3
BraA06t24270Z Brassica rapa HOM05D007244 ORTHO05D011635 5.5e-09 66.6 79 51.9
BcaC07g40289 Brassica carinata HOM05D007244 ORTHO05D021589 1.6e-08 65.1 233 31.8
C04p07250 Brassica napus HOM05D007244 ORTHO05D021882 1.6e-08 65.1 177 28.8
BcaB03g16499 Brassica carinata HOM05D013597 ORTHO05D011635 2.7e-08 64.3 97 44.3
BcaC01g01541 Brassica carinata HOM05D000081 ORTHO05D014497 2.7e-08 64.3 156 41.7
BcaC01g02738 Brassica carinata HOM05D000042 ORTHO05D003657 2.7e-08 64.3 143 40.6
BcaC09g48969 Brassica carinata HOM05D007244 ORTHO05D011635 2.7e-08 64.3 71 53.5
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 3.5e-08 63.9 304 24.3
BcaB07g33782 Brassica carinata HOM05D007244 ORTHO05D021882 6.1e-08 63.2 76 46.1
BcaB05g21481 Brassica carinata HOM05D000048 ORTHO05D000436 1.0e-07 62.4 134 37.3
BcaB07g33461 Brassica carinata HOM05D007244 ORTHO05D032887 1.8e-07 61.6 71 53.5
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-07 61.2 388 24.2
BcaC05g29073 Brassica carinata HOM05D007244 ORTHO05D011635 3.0e-07 60.8 96 40.6
BcaB04g19346 Brassica carinata HOM05D007244 ORTHO05D011635 5.1e-07 60.1 56 53.6
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 5.1e-07 60.1 330 26.1
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 6.7e-07 59.7 195 28.2
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 6.7e-07 59.7 290 25.5
BolC8t51261H Brassica oleracea HOM05D013597 ORTHO05D017540 6.7e-07 59.7 144 36.1
BcaC07g39785 Brassica carinata HOM05D007244 ORTHO05D011635 1.1e-06 58.9 82 46.3
BolC5t33308H Brassica oleracea HOM05D007244 ORTHO05D011635 1.1e-06 58.9 75 44.0
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-06 58.5 349 24.9
BcaC04g22876 Brassica carinata HOM05D007244 ORTHO05D011635 1.9e-06 58.2 115 35.7
BolC5t31092H Brassica oleracea HOM05D007244 ORTHO05D024493 1.9e-06 58.2 36 66.7
BcaB01g03539 Brassica carinata HOM05D007244 ORTHO05D095278 3.3e-06 57.4 235 37.0
BolC2t12338H Brassica oleracea HOM05D007244 ORTHO05D011635 3.3e-06 57.4 71 42.3
BcaC09g50339 Brassica carinata HOM05D003857 ORTHO05D004454 5.7e-06 56.6 79 45.6
SpUn0002_0220 Schrenkiella parvula HOM05D007244 ORTHO05D011635 7.4e-06 56.2 36 63.9


User provided reference genes

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