Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g47924 Brassica carinata HOM05D000797 ORTHO05D007726 2.1e-39 165.2 82 100.0
BolC1t05582H Brassica oleracea HOM05D000797 ORTHO05D007726 1.3e-36 156.0 79 96.2
A03p34910 Brassica napus HOM05D000797 ORTHO05D007726 1.5e-26 122.5 63 95.2
C03p42490 Brassica napus HOM05D000797 ORTHO05D007726 1.5e-26 122.5 63 95.2
BraA03t12671Z Brassica rapa HOM05D000797 ORTHO05D007726 1.5e-26 122.5 63 95.2
BolC3t16519H Brassica oleracea HOM05D000797 ORTHO05D007726 4.5e-26 120.9 63 93.7
Thhalv10020615m.g Eutrema salsugineum HOM05D000797 ORTHO05D007726 9.9e-26 119.8 63 93.7
AL3G17970 Arabidopsis lyrata HOM05D000797 ORTHO05D007726 6.4e-25 117.1 63 90.5
AT3G06850 Arabidopsis thaliana HOM05D000797 ORTHO05D007726 6.4e-25 117.1 63 90.5
Carub.0003s0638 Capsella rubella HOM05D000797 ORTHO05D007726 6.4e-25 117.1 63 90.5
Sp3g05810 Schrenkiella parvula HOM05D000797 ORTHO05D007726 6.4e-25 117.1 63 92.1
CARHR081460 Cardamine hirsuta HOM05D000797 ORTHO05D007726 8.4e-25 116.7 63 88.9
THA.LOC104818913 Tarenaya hassleriana HOM05D000797 ORTHO05D007726 7.1e-24 113.6 63 85.7
Manes.03G198100 Manihot esculenta HOM05D000797 ORTHO05D007726 1.8e-22 109.0 65 76.9
FAN07G0695 Fragaria x ananassa HOM05D005069 ORTHO05D006024 8.7e-22 106.7 63 76.2
RcHm_v2.0_Chr4g0423151 Rosa chinensis HOM05D000797 ORTHO05D007726 8.7e-22 106.7 63 77.8
Cpa.g.sc50.171 Carica papaya HOM05D000797 ORTHO05D007726 1.1e-21 106.3 63 76.2
Prupe.1G132500 Prunus persica HOM05D000797 ORTHO05D007726 1.1e-21 106.3 63 79.4
Lj4g0021722 Lotus japonicus HOM05D004309 ORTHO05D007726 1.5e-21 105.9 65 78.5
Cfa014702 Carpinus fangiana HOM05D000797 ORTHO05D007726 1.9e-21 105.5 63 76.2
ClCG05G006220 Citrullus lanatus HOM05D000797 ORTHO05D007726 1.9e-21 105.5 63 79.4
COL.COLO4_13828 Corchorus olitorius HOM05D005069 ORTHO05D006024 1.9e-21 105.5 63 76.2
Haze_13326 Corylus avellana HOM05D000797 ORTHO05D007726 1.9e-21 105.5 63 76.2
Dinv44356 Davidia involucrata HOM05D000797 ORTHO05D007726 1.9e-21 105.5 65 73.8
CSS0044303 Camellia sinensis var. sinensis HOM05D000797 ORTHO05D007726 3.3e-21 104.8 65 76.9
Medtr4g120220 Medicago truncatula HOM05D000797 ORTHO05D007726 3.3e-21 104.8 65 78.5
Nn3g21531 Nelumbo nucifera HOM05D000797 ORTHO05D007726 3.3e-21 104.8 63 77.8
arahy.Tifrunner.gnm1.ann1.BZZQ7R Arachis hypogaea HOM05D000797 ORTHO05D007726 4.3e-21 104.4 65 73.8
CANSAT78G2398 Cannabis sativa HOM05D000797 ORTHO05D007726 4.3e-21 104.4 62 77.4
CiPaw.01G145900 Carya illinoinensis HOM05D000797 ORTHO05D007726 4.3e-21 104.4 63 76.2
Ca_21482_v3 Cicer arietinum L. HOM05D000797 ORTHO05D007726 4.3e-21 104.4 65 76.9
MBI19_g34790_MAGBIO Magnolia biondii HOM05D000797 ORTHO05D007726 4.3e-21 104.4 63 77.8
Potri.008G219700 Populus trichocarpa HOM05D000797 ORTHO05D007726 4.3e-21 104.4 63 77.8
ATR0796G192 Amborella trichopoda HOM05D000797 ORTHO05D007726 5.6e-21 104.0 65 72.3
PSO832G1872 Papaver somniferum HOM05D000797 ORTHO05D007726 5.6e-21 104.0 63 74.6
Psat4g026280 Pisum sativum HOM05D000797 ORTHO05D007726 5.6e-21 104.0 65 75.4
QL06p010151 Quercus lobata HOM05D000797 ORTHO05D007726 5.6e-21 104.0 63 76.2
TPR.G3182 Trifolium pratense HOM05D000797 ORTHO05D007726 5.6e-21 104.0 65 78.5
Atru.chr4.2892 Acer truncatum HOM05D000797 ORTHO05D007726 7.4e-21 103.6 63 81.0
Sabra10G0007300 Salix brachista HOM05D000797 ORTHO05D007726 7.4e-21 103.6 63 76.2
Thecc.04G288000 Theobroma cacao HOM05D000797 ORTHO05D007726 7.4e-21 103.6 61 77.0
TAR362G0149 Trochodendron aralioides HOM05D001727 ORTHO05D007726 7.4e-21 103.6 63 76.2
arahy.Tifrunner.gnm1.ann1.YC35GQ Arachis hypogaea HOM05D004309 ORTHO05D007726 9.6e-21 103.2 65 72.3
Cc03_g01610 Coffea canephora HOM05D000797 ORTHO05D007726 9.6e-21 103.2 63 74.6
Eucgr.H03953 Eucalyptus grandis HOM05D000797 ORTHO05D007726 9.6e-21 103.2 63 76.2
SEGI_36599 Sequoiadendron giganteum HOM05D000797 ORTHO05D007726 9.6e-21 103.2 65 73.8
TWI73G1204 Tripterygium wilfordii HOM05D000797 ORTHO05D007726 9.6e-21 103.2 63 81.0
vmacro08180 Vaccinium macrocarpon HOM05D000797 ORTHO05D007726 9.6e-21 103.2 65 73.8
ECA246G2476 Erigeron canadensis HOM05D000797 ORTHO05D007726 1.3e-20 102.8 63 76.2
SGA_v2.0_scaffold67G22605 Striga asiatica HOM05D000797 ORTHO05D007726 1.3e-20 102.8 63 76.2
Lalb_Chr12g0196651 Lupinus albus HOM05D000797 ORTHO05D007726 1.6e-20 102.4 65 75.4
Potri.010G011300 Populus trichocarpa HOM05D000797 ORTHO05D007726 1.6e-20 102.4 63 74.6
Sed0017832 Sechium edule HOM05D000797 ORTHO05D007726 1.6e-20 102.4 63 74.6
TWI09G1463 Tripterygium wilfordii HOM05D000797 ORTHO05D007726 1.6e-20 102.4 63 79.4
CAN.G1137.1 Capsicum annuum HOM05D000797 ORTHO05D007726 2.1e-20 102.1 67 65.7
Duzib212G0824 Durio zibethinus HOM05D000797 ORTHO05D007726 2.1e-20 102.1 63 73.0
Peaxi162Scf00065g01524 Petunia axillaris HOM05D000797 ORTHO05D007726 2.1e-20 102.1 62 71.0
Aqoxy5G00779 Aquilegia oxysepala HOM05D000797 ORTHO05D007726 2.8e-20 101.7 63 74.6
AUR62032016 Chenopodium quinoa HOM05D000797 ORTHO05D007726 2.8e-20 101.7 63 74.6
MELO3C006679.2 Cucumis melo HOM05D000797 ORTHO05D007726 2.8e-20 101.7 63 76.2
CsaV3_3G014830 Cucumis sativus L. HOM05D000797 ORTHO05D007726 2.8e-20 101.7 63 74.6
Hma1.2p1_0804F.1_g221000 Hydrangea macrophylla HOM05D000797 ORTHO05D007726 2.8e-20 101.7 63 74.6
Hma1.2p1_0804F.1_g221010 Hydrangea macrophylla HOM05D000797 ORTHO05D007726 2.8e-20 101.7 63 74.6
PSO210G3438 Papaver somniferum HOM05D000797 ORTHO05D007726 2.8e-20 101.7 63 73.0
MSTRG.10111 Avicennia marina HOM05D000797 ORTHO05D007726 3.7e-20 101.3 63 73.0
EL10Ac3g06632 Beta vulgaris HOM05D000797 ORTHO05D007726 4.8e-20 100.9 63 74.6
AUR62018093 Chenopodium quinoa HOM05D000797 ORTHO05D007726 8.1e-20 100.1 63 74.6
Ciclev10004761m.g Citrus clementina HOM05D000797 ORTHO05D007726 8.1e-20 100.1 63 74.6
Rhsim04G0224800 Rhododendron simsii HOM05D000797 ORTHO05D007726 8.1e-20 100.1 65 73.8
VMungo1215G0560 Vigna mungo HOM05D000797 ORTHO05D007726 8.1e-20 100.1 65 72.3
Glyma.17G028000 Glycine max HOM05D000797 ORTHO05D007726 1.1e-19 99.8 65 72.3
Os01g0314100 Oryza sativa ssp. japonica HOM05D000797 ORTHO05D007726 1.1e-19 99.8 65 73.8
Phvul.003G106700 Phaseolus vulgaris HOM05D000797 ORTHO05D007726 1.1e-19 99.8 65 70.8
PGR004G0333 Punica granatum HOM05D000797 ORTHO05D007726 1.1e-19 99.8 63 73.0
unitig_748.g8725 Utricularia gibba HOM05D000797 ORTHO05D007726 1.1e-19 99.8 63 71.4
Migut.G00134 Erythranthe guttata HOM05D000797 ORTHO05D007726 1.4e-19 99.4 63 68.3
HanXRQChr17g0536081 Helianthus annuus HOM05D000797 ORTHO05D007726 1.8e-19 99.0 63 73.0
GSVIVG01035121001 Vitis vinifera HOM05D000797 ORTHO05D007726 2.4e-19 98.6 63 73.0
Gohir.A09G237700 Gossypium hirsutum HOM05D000797 ORTHO05D007726 4.0e-19 97.8 63 71.4
Gohir.D09G238600 Gossypium hirsutum HOM05D000797 ORTHO05D007726 4.0e-19 97.8 63 71.4
Gorai.006G261300 Gossypium raimondii HOM05D000797 ORTHO05D007726 4.0e-19 97.8 63 71.4
Lsat_1_v5_gn_3_24121 Lactuca sativa HOM05D000797 ORTHO05D007726 4.0e-19 97.8 63 69.8
SalBow2G1825 Salvia bowleyana HOM05D000797 ORTHO05D007726 4.0e-19 97.8 63 69.8
Ah.04g153650 Amaranthus hybridus HOM05D000797 ORTHO05D007726 5.3e-19 97.4 63 71.4
Solyc01g066520.3 Solanum lycopersicum HOM05D000797 ORTHO05D007726 5.3e-19 97.4 64 70.3
Zm00001eb130640 Zea mays HOM05D000797 ORTHO05D007726 5.3e-19 97.4 65 72.3
SMO356G0665 Selaginella moellendorffii HOM05D000797 ORTHO05D007726 6.9e-19 97.1 65 66.2
Sopen01g028100 Solanum pennellii HOM05D000797 ORTHO05D007726 6.9e-19 97.1 64 68.8
PGSC0003DMG400011330 Solanum tuberosum HOM05D000797 ORTHO05D007726 6.9e-19 97.1 64 68.8
Glyma.07G246000 Glycine max HOM05D000797 ORTHO05D007726 9.0e-19 96.7 65 70.8
MD13G1165700 Malus domestica HOM05D000797 ORTHO05D007726 1.5e-18 95.9 63 69.8
HanXRQChr03g0089531 Helianthus annuus HOM05D000797 ORTHO05D007726 2.0e-18 95.5 61 73.8
Lj6A680T85 Lonicera japonica HOM05D000797 ORTHO05D007726 2.0e-18 95.5 63 68.3
Nitab4.5_0000695g0030 Nicotiana tabacum HOM05D000797 ORTHO05D007726 2.0e-18 95.5 62 69.4
Nitab4.5_0005312g0020 Nicotiana tabacum HOM05D000797 ORTHO05D007726 2.0e-18 95.5 64 65.6
CDE12G0277 Ceratophyllum demersum HOM05D000797 ORTHO05D007726 7.6e-18 93.6 59 72.9
Hund20525 Selenicereus undatus HOM05D000797 ORTHO05D007726 7.6e-18 93.6 63 68.3
HPP92_002152 Vanilla planifolia HOM05D000797 ORTHO05D007726 1.0e-17 93.2 58 70.7
Mapoly0127s0040 Marchantia polymorpha HOM05D000797 ORTHO05D007726 2.2e-17 92.0 65 60.0
Sc13g0003290 Simmondsia chinensis HOM05D000797 ORTHO05D007726 2.2e-17 92.0 63 68.3
Actinidia19577 Actinidia chinensis HOM05D000797 ORTHO05D007726 1.2e-15 86.3 52 76.9
DCAR_027056 Daucus carota HOM05D004309 ORTHO05D005588 7.9e-15 83.6 55 65.5
Pp3c7_200 Physcomitrium patens HOM05D000797 ORTHO05D007726 8.2e-12 73.6 48 64.6
PRCOL_00005061 Prasinoderma coloniale HOM05D000797 ORTHO05D007726 4.0e-11 71.2 66 50.0
Cre04.g228350 Chlamydomonas reinhardtii HOM05D000797 ORTHO05D007726 1.2e-07 59.7 48 52.1
CBR_g54237 Chara braunii HOM05D000797 ORTHO05D004867 3.9e-06 54.7 65 43.1


User provided reference genes

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