Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g47864 Brassica carinata HOM05D000052 ORTHO05D095519 5.3e-37 157.1 77 100.0
Thhalv10021469m.g Eutrema salsugineum HOM05D000052 ORTHO05D000046 9.7e-15 83.2 42 97.6
Sp3g04870 Schrenkiella parvula HOM05D000052 ORTHO05D000046 9.7e-15 83.2 42 97.6
BcaC09g47863 Brassica carinata HOM05D000052 ORTHO05D000046 2.2e-14 82.0 42 95.2
BcaC09g47865 Brassica carinata HOM05D000052 ORTHO05D000046 2.2e-14 82.0 42 95.2
BolC1t05649H Brassica oleracea HOM05D000052 ORTHO05D000046 4.8e-14 80.9 42 92.9
BraA01t04461Z Brassica rapa HOM05D000052 ORTHO05D000046 1.4e-13 79.3 42 92.9
AL3G16740 Arabidopsis lyrata HOM05D000052 ORTHO05D000046 2.4e-13 78.6 42 90.5
AT3G05950 Arabidopsis thaliana HOM05D000052 ORTHO05D000046 3.1e-13 78.2 42 90.5
Carub.0003s0536 Capsella rubella HOM05D000052 ORTHO05D000046 5.3e-13 77.4 42 88.1
CARHR080440 Cardamine hirsuta HOM05D000052 ORTHO05D000046 9.1e-13 76.6 42 88.1
Carub.0003s0343 Capsella rubella HOM05D000052 ORTHO05D000046 2.6e-12 75.1 45 75.6
AT3G04180 Arabidopsis thaliana HOM05D000052 ORTHO05D000046 2.9e-11 71.6 42 78.6
CARHR078330 Cardamine hirsuta HOM05D000052 ORTHO05D000046 2.9e-11 71.6 42 78.6
CARHR078320 Cardamine hirsuta HOM05D000052 ORTHO05D000046 6.5e-11 70.5 42 78.6
AL3G14150 Arabidopsis lyrata HOM05D000052 ORTHO05D000046 8.5e-11 70.1 42 76.2
CARHR078350 Cardamine hirsuta HOM05D000052 ORTHO05D000046 1.9e-10 68.9 63 63.5
AT3G04190 Arabidopsis thaliana HOM05D000052 ORTHO05D000046 3.2e-10 68.2 42 73.8
Aa31LG5G16410 Aethionema arabicum HOM05D000052 ORTHO05D000046 4.2e-10 67.8 62 61.3
AL3G14100 Arabidopsis lyrata HOM05D000052 ORTHO05D000046 9.4e-10 66.6 42 73.8
CARHR078340 Cardamine hirsuta HOM05D000052 ORTHO05D000046 9.4e-10 66.6 42 73.8
AT3G04200 Arabidopsis thaliana HOM05D000052 ORTHO05D000046 4.6e-09 64.3 41 75.6
Thhalv10022237m.g Eutrema salsugineum HOM05D000052 ORTHO05D000046 7.9e-09 63.5 39 82.1
AT3G04150 Arabidopsis thaliana HOM05D000052 ORTHO05D000046 1.0e-08 63.2 41 68.3
AT3G04170 Arabidopsis thaliana HOM05D000052 ORTHO05D000046 2.3e-08 62.0 53 62.3
Carub.0003s0340 Capsella rubella HOM05D000052 ORTHO05D000046 6.7e-08 60.5 43 69.8
AL3G14140 Arabidopsis lyrata HOM05D000052 ORTHO05D000046 8.8e-08 60.1 42 64.3
Carub.0003s0344 Capsella rubella HOM05D000052 ORTHO05D000046 1.5e-07 59.3 41 70.7
Aa31LG5G14690 Aethionema arabicum HOM05D000052 ORTHO05D000046 2.6e-07 58.5 61 54.1
AL3G14060 Arabidopsis lyrata HOM05D000052 ORTHO05D000046 4.4e-07 57.8 35 77.1
Potri.004G179800 Populus trichocarpa HOM05D000052 ORTHO05D000046 4.4e-07 57.8 34 79.4
Potri.004G179811 Populus trichocarpa HOM05D000052 ORTHO05D000046 4.4e-07 57.8 34 79.4
Potri.004G179833 Populus trichocarpa HOM05D000052 ORTHO05D000046 4.4e-07 57.8 34 79.4
Potri.004G179844 Populus trichocarpa HOM05D000052 ORTHO05D000046 4.4e-07 57.8 34 79.4
Potri.004G179855 Populus trichocarpa HOM05D000052 ORTHO05D000046 4.4e-07 57.8 34 79.4
Potri.004G179888 Populus trichocarpa HOM05D000052 ORTHO05D000046 4.4e-07 57.8 34 79.4
Potri.004G179900 Populus trichocarpa HOM05D000052 ORTHO05D000046 4.4e-07 57.8 34 79.4
Potri.004G180100 Populus trichocarpa HOM05D000052 ORTHO05D000046 4.4e-07 57.8 34 79.4
Potri.013G051600 Populus trichocarpa HOM05D000052 ORTHO05D000046 4.8e-06 54.3 42 69.0
Potri.013G051700 Populus trichocarpa HOM05D000052 ORTHO05D000046 4.8e-06 54.3 42 69.0
QL05p048704 Quercus lobata HOM05D000052 ORTHO05D000046 8.2e-06 53.5 32 75.0
QL05p048719 Quercus lobata HOM05D000052 ORTHO05D000046 8.2e-06 53.5 32 75.0
QL05p048733 Quercus lobata HOM05D000052 ORTHO05D000046 8.2e-06 53.5 32 75.0
QL05p048742 Quercus lobata HOM05D000052 ORTHO05D037437 8.2e-06 53.5 32 75.0


User provided reference genes

Program Settings