Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g47825 Brassica carinata HOM05D012802 ORTHO05D014772 2.0e-49 198.7 99 100.0
BolC1t05694H Brassica oleracea HOM05D012802 ORTHO05D014772 7.2e-47 190.3 94 100.0
BNapus_Darmor_BZH_scaffold_114p00070 Brassica napus HOM05D012802 ORTHO05D014772 2.7e-46 188.3 94 97.9
BraSC132t45503Z Brassica rapa HOM05D012802 ORTHO05D014772 2.7e-46 188.3 94 97.9
BcaB04g21448 Brassica carinata HOM05D012802 ORTHO05D014772 1.2e-41 172.9 93 90.3
Sp3g04290 Schrenkiella parvula HOM05D012802 ORTHO05D014772 2.3e-40 168.7 93 86.0
Carub.0003s0472 Capsella rubella HOM05D012802 ORTHO05D014772 2.5e-39 165.2 93 83.9
AL304U10010 Arabidopsis lyrata HOM05D012802 ORTHO05D014772 3.2e-39 164.9 93 83.9
Thhalv10022221m.g Eutrema salsugineum HOM05D012802 ORTHO05D014772 2.1e-38 162.2 93 83.9
AT3G05440 Arabidopsis thaliana HOM05D012802 ORTHO05D014772 3.6e-38 161.4 93 82.8
CARHR079780 Cardamine hirsuta HOM05D012802 ORTHO05D014772 3.0e-37 158.3 93 82.8
Aa31LG5G15940 Aethionema arabicum HOM05D012802 ORTHO05D014772 1.8e-29 132.5 94 67.0
AL304U10040 Arabidopsis lyrata HOM05D017090 ORTHO05D018449 1.2e-17 93.2 49 87.8
AL3G16000 Arabidopsis lyrata HOM05D017090 ORTHO05D018449 1.2e-17 93.2 86 59.3
Aqoxy2G03021 Aquilegia oxysepala HOM05D000865 ORTHO05D000739 1.4e-10 69.7 88 36.4
TAR362G0271 Trochodendron aralioides HOM05D000865 ORTHO05D000739 1.0e-08 63.5 88 35.2
Dinv29770 Davidia involucrata HOM05D000865 ORTHO05D000739 6.6e-08 60.8 88 33.0
Dinv30790 Davidia involucrata HOM05D000865 ORTHO05D000739 8.6e-08 60.5 90 37.8
PSO832G1537 Papaver somniferum HOM05D000865 ORTHO05D000739 2.5e-07 58.9 90 32.2
THA.LOC104805887 Tarenaya hassleriana HOM05D000865 ORTHO05D000739 5.6e-07 57.8 90 32.2
PSO591G0270 Papaver somniferum HOM05D000865 ORTHO05D000739 9.5e-07 57.0 90 31.1
Gohir.A11G266500 Gossypium hirsutum HOM05D000865 ORTHO05D000739 1.2e-06 56.6 87 31.0
Gohir.D11G276800 Gossypium hirsutum HOM05D000865 ORTHO05D000739 1.2e-06 56.6 87 31.0
Gorai.007G298900 Gossypium raimondii HOM05D000865 ORTHO05D000739 1.2e-06 56.6 87 31.0
THA.LOC104820822 Tarenaya hassleriana HOM05D000865 ORTHO05D000739 1.2e-06 56.6 89 31.5
Thecc.05G311200 Theobroma cacao HOM05D000865 ORTHO05D000739 1.6e-06 56.2 88 29.5
TAR633G1600 Trochodendron aralioides HOM05D000865 ORTHO05D000739 1.6e-06 56.2 88 30.7
Gohir.D11G309700 Gossypium hirsutum HOM05D000865 ORTHO05D000739 2.1e-06 55.8 88 30.7
Gorai.007G341700 Gossypium raimondii HOM05D000865 ORTHO05D000739 2.1e-06 55.8 88 30.7
Gohir.A11G295000 Gossypium hirsutum HOM05D000865 ORTHO05D000739 2.8e-06 55.5 88 30.7
TAR636G2581 Trochodendron aralioides HOM05D000865 ORTHO05D000739 2.8e-06 55.5 87 35.6
Cc00_g10550 Coffea canephora HOM05D000865 ORTHO05D000739 3.6e-06 55.1 91 31.9
Rhsim07G0186500 Rhododendron simsii HOM05D000865 ORTHO05D000739 3.6e-06 55.1 86 34.9
Duzib177G0415 Durio zibethinus HOM05D000865 ORTHO05D000739 4.7e-06 54.7 88 34.1
HanXRQChr03g0080801 Helianthus annuus HOM05D000865 ORTHO05D000739 6.2e-06 54.3 85 34.1
PSO675G0756 Papaver somniferum HOM05D000865 ORTHO05D000739 6.2e-06 54.3 91 29.7
CANSAT54G1245 Cannabis sativa HOM05D000865 ORTHO05D000739 8.1e-06 53.9 87 29.9
Nn4g25898 Nelumbo nucifera HOM05D000865 ORTHO05D000739 8.1e-06 53.9 88 29.5


User provided reference genes

Program Settings