Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g47563 Brassica carinata HOM05D002960 ORTHO05D095078 1.6e-28 129.4 106 100.0
AL2G41600 Arabidopsis lyrata HOM05D002960 ORTHO05D003632 3.6e-12 75.1 158 50.6
C06p28790 Brassica napus HOM05D002960 ORTHO05D003632 3.6e-12 75.1 126 48.4
Aa31LG4G250 Aethionema arabicum HOM05D002960 ORTHO05D003632 5.2e-11 71.2 163 50.3
A07p26400 Brassica napus HOM05D002960 ORTHO05D003632 1.5e-10 69.7 126 46.8
BraA07t30284Z Brassica rapa HOM05D002960 ORTHO05D003632 1.5e-10 69.7 126 46.8
BcaC03g16012 Brassica carinata HOM05D002960 ORTHO05D024096 5.8e-10 67.8 52 76.9
C02p37670 Brassica napus HOM05D002960 ORTHO05D024096 5.8e-10 67.8 52 76.9
BolC6t38049H Brassica oleracea HOM05D002960 ORTHO05D003632 7.6e-10 67.4 126 46.0
CiPaw.04G140400 Carya illinoinensis HOM05D002960 ORTHO05D003632 2.2e-09 65.9 161 38.5
Thhalv10018223m.g Eutrema salsugineum HOM05D002960 ORTHO05D003632 1.9e-08 62.8 97 45.4
C06p54330 Brassica napus HOM05D002960 ORTHO05D003632 3.2e-08 62.0 160 49.4
BolC6t40444H Brassica oleracea HOM05D002960 ORTHO05D003632 3.2e-08 62.0 160 49.4
TPR.G20789 Trifolium pratense HOM05D002960 ORTHO05D003632 4.1e-08 61.6 162 41.4
BraA02t07381Z Brassica rapa HOM05D002960 ORTHO05D024096 7.1e-08 60.8 35 85.7
THA.LOC104811944 Tarenaya hassleriana HOM05D002960 ORTHO05D003632 7.1e-08 60.8 125 40.8
QL11p003257 Quercus lobata HOM05D002960 ORTHO05D003632 1.2e-07 60.1 159 37.1
CARHR074540 Cardamine hirsuta HOM05D002960 ORTHO05D003632 2.1e-07 59.3 97 42.3
Potri.004G072200 Populus trichocarpa HOM05D002960 ORTHO05D003632 2.1e-07 59.3 107 41.1
Sp5g35840 Schrenkiella parvula HOM05D002960 ORTHO05D003632 2.7e-07 58.9 97 43.3
PGR042G1381 Punica granatum HOM05D002960 ORTHO05D003632 3.5e-07 58.5 158 39.2
Gohir.D12G255700 Gossypium hirsutum HOM05D002960 ORTHO05D003632 4.6e-07 58.2 107 40.2
Gorai.008G273800 Gossypium raimondii HOM05D002960 ORTHO05D003632 4.6e-07 58.2 107 40.2
Carub.0002s2756 Capsella rubella HOM05D002960 ORTHO05D003632 6.0e-07 57.8 97 42.3
Sabra04G0047600 Salix brachista HOM05D002960 ORTHO05D003632 7.8e-07 57.4 107 39.3
Gohir.A12G253400 Gossypium hirsutum HOM05D002960 ORTHO05D003632 1.0e-06 57.0 107 39.3
Os04g0307200 Oryza sativa ssp. japonica HOM05D002960 ORTHO05D003632 1.0e-06 57.0 51 56.9
Psat1g137760 Pisum sativum HOM05D002960 ORTHO05D003632 1.0e-06 57.0 106 37.7
TAR636G2825 Trochodendron aralioides HOM05D002960 ORTHO05D003632 1.0e-06 57.0 102 37.3
CiPaw.03G199900 Carya illinoinensis HOM05D002960 ORTHO05D003632 1.7e-06 56.2 98 49.0
Duzib205G1208 Durio zibethinus HOM05D002960 ORTHO05D003632 1.7e-06 56.2 165 36.4
MD01G1210000 Malus domestica HOM05D002960 ORTHO05D003632 1.7e-06 56.2 93 51.6
Dinv09615 Davidia involucrata HOM05D002960 ORTHO05D003632 2.3e-06 55.8 107 40.2
Manes.06G153311 Manihot esculenta HOM05D002960 ORTHO05D003632 2.3e-06 55.8 107 39.3
Duzib084G0224 Durio zibethinus HOM05D002960 ORTHO05D003632 3.9e-06 55.1 107 39.3
AT1G79940 Arabidopsis thaliana HOM05D002960 ORTHO05D003632 5.1e-06 54.7 97 40.2
HanXRQChr07g0202321 Helianthus annuus HOM05D002960 ORTHO05D003632 5.1e-06 54.7 106 35.8
Aqoxy1G00557 Aquilegia oxysepala HOM05D002960 ORTHO05D003632 6.6e-06 54.3 52 55.8
Prupe.2G302300 Prunus persica HOM05D002960 ORTHO05D003632 6.6e-06 54.3 107 37.4
Aqoxy3G00494 Aquilegia oxysepala HOM05D002960 ORTHO05D003632 8.6e-06 53.9 106 54.7
Cfa019929 Carpinus fangiana HOM05D002960 ORTHO05D003632 8.6e-06 53.9 107 36.4
Haze_05396 Corylus avellana HOM05D002960 ORTHO05D003632 8.6e-06 53.9 107 36.4


User provided reference genes

Program Settings