Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g47135 Brassica carinata HOM05D001078 ORTHO05D000927 5.2e-77 291.2 171 100.0
A07p42000 Brassica napus HOM05D001078 ORTHO05D000927 1.9e-42 176.4 146 80.1
BraA07t31730Z Brassica rapa HOM05D001078 ORTHO05D000927 1.9e-42 176.4 146 80.1
C06p50570 Brassica napus HOM05D001078 ORTHO05D000927 7.8e-41 171.0 141 83.0
BolC6t40082H Brassica oleracea HOM05D001078 ORTHO05D000927 7.8e-41 171.0 141 83.0
BcaC08g47257 Brassica carinata HOM05D001078 ORTHO05D000927 3.9e-40 168.7 141 82.3
Sp5g31530 Schrenkiella parvula HOM05D001078 ORTHO05D000927 2.8e-38 162.5 146 68.5
Thhalv10018318m.g Eutrema salsugineum HOM05D001078 ORTHO05D000927 1.7e-32 143.3 149 67.8
Carub.0002s2328 Capsella rubella HOM05D001078 ORTHO05D000927 1.8e-21 106.7 150 63.3
Thhalv10007011m.g Eutrema salsugineum HOM05D001078 ORTHO05D000927 2.6e-20 102.8 165 56.4
Aa31LG7G4880 Aethionema arabicum HOM05D001078 ORTHO05D000927 1.1e-18 97.4 175 53.7
C08p20310 Brassica napus HOM05D001078 ORTHO05D000927 1.4e-18 97.1 151 48.3
BcaB07g32064 Brassica carinata HOM05D001078 ORTHO05D000927 1.9e-18 96.7 154 53.9
BolC8t49659H Brassica oleracea HOM05D001078 ORTHO05D000927 1.2e-17 94.0 151 52.3
BcaB03g12858 Brassica carinata HOM05D001078 ORTHO05D000927 3.5e-17 92.4 155 49.0
A08p29290 Brassica napus HOM05D001078 ORTHO05D000927 6.0e-17 91.7 149 52.3
C05p19290 Brassica napus HOM05D001078 ORTHO05D000927 1.8e-16 90.1 160 54.4
BolC5t30629H Brassica oleracea HOM05D001078 ORTHO05D000927 1.8e-16 90.1 160 54.4
THA.LOC104809829 Tarenaya hassleriana HOM05D001078 ORTHO05D000927 1.8e-16 90.1 155 46.5
BraA08t34864Z Brassica rapa HOM05D001078 ORTHO05D000927 2.3e-16 89.7 152 51.3
Sp1g18380 Schrenkiella parvula HOM05D001078 ORTHO05D000927 2.3e-16 89.7 163 53.4
A06p16670 Brassica napus HOM05D001078 ORTHO05D000927 8.7e-16 87.8 159 53.5
BraA06t24774Z Brassica rapa HOM05D001078 ORTHO05D000927 8.7e-16 87.8 159 53.5
THA.LOC104813751 Tarenaya hassleriana HOM05D001078 ORTHO05D000927 4.3e-15 85.5 163 47.2
CARHR069930 Cardamine hirsuta HOM05D001078 ORTHO05D000927 1.6e-14 83.6 145 51.7
BcaC07g39048 Brassica carinata HOM05D001078 ORTHO05D000927 3.7e-14 82.4 141 50.4
Aa31LG4G6450 Aethionema arabicum HOM05D001078 ORTHO05D000927 4.8e-14 82.0 163 50.3
Carub.0001s2014 Capsella rubella HOM05D001078 ORTHO05D000927 1.2e-12 77.4 166 44.0
BcaC05g25977 Brassica carinata HOM05D001078 ORTHO05D000927 1.5e-12 77.0 150 52.0
THA.LOC104811472 Tarenaya hassleriana HOM05D001078 ORTHO05D000927 3.4e-12 75.9 162 51.2
AL1G33640 Arabidopsis lyrata HOM05D001078 ORTHO05D000927 1.9e-10 70.1 163 44.2
AT1G20670 Arabidopsis thaliana HOM05D001078 ORTHO05D000927 1.9e-10 70.1 164 40.2
BcaB07g32067 Brassica carinata HOM05D001078 ORTHO05D000927 1.6e-09 67.0 124 50.0
AT1G76380 Arabidopsis thaliana HOM05D001078 ORTHO05D000927 7.9e-09 64.7 140 51.4
BcaC06g34828 Brassica carinata HOM05D001078 ORTHO05D000927 1.8e-08 63.5 147 49.7
C07p22900 Brassica napus HOM05D001078 ORTHO05D000927 1.8e-08 63.5 147 49.7
BolC7t42829H Brassica oleracea HOM05D001078 ORTHO05D000927 1.8e-08 63.5 147 49.7
AL2G36480 Arabidopsis lyrata HOM05D001078 ORTHO05D000927 6.7e-08 61.6 94 63.8
A07p15530 Brassica napus HOM05D001078 ORTHO05D000927 8.7e-08 61.2 127 48.8
Sabra02G0006700 Salix brachista HOM05D001078 ORTHO05D000927 1.1e-07 60.8 157 46.5
BraA07t29294Z Brassica rapa HOM05D001078 ORTHO05D000927 1.3e-06 57.4 112 54.5
BcaB03g14308 Brassica carinata HOM05D001078 ORTHO05D000927 4.8e-06 55.5 151 46.4
Duzib116G0459 Durio zibethinus HOM05D001078 ORTHO05D000927 4.8e-06 55.5 157 42.7
COL.COLO4_36411 Corchorus olitorius HOM05D001078 ORTHO05D000927 6.3e-06 55.1 165 43.0


User provided reference genes

Program Settings