Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46942 Brassica carinata HOM05D007599 ORTHO05D009548 7.5e-24 113.6 87 100.0
C06p49140 Brassica napus HOM05D007599 ORTHO05D009548 7.5e-24 113.6 87 100.0
BolC6t39948H Brassica oleracea HOM05D001180 ORTHO05D001055 4.9e-23 110.9 85 100.0
BraA07t31618Z Brassica rapa HOM05D001180 ORTHO05D001055 1.2e-18 96.3 77 100.0
Sp5g30310 Schrenkiella parvula HOM05D007599 ORTHO05D009548 4.7e-18 94.4 87 86.2
A07p40760 Brassica napus HOM05D001180 ORTHO05D001055 5.2e-17 90.9 74 100.0
Thhalv10019387m.g Eutrema salsugineum HOM05D007599 ORTHO05D009548 2.2e-15 85.5 87 56.3
BolC6t38400H Brassica oleracea HOM05D007599 ORTHO05D009548 1.9e-14 82.4 88 81.8
C06p32780 Brassica napus HOM05D007599 ORTHO05D009548 3.2e-14 81.6 85 81.2
A07p29010 Brassica napus HOM05D007599 ORTHO05D009548 6.0e-13 77.4 84 79.8
BraA07t30541Z Brassica rapa HOM05D007599 ORTHO05D009548 6.0e-13 77.4 84 79.8
Carub.0002s0362 Capsella rubella HOM05D007599 ORTHO05D009548 1.7e-12 75.9 85 83.5
BcaNung06629 Brassica carinata HOM05D007599 ORTHO05D009548 3.0e-12 75.1 83 81.9
BcaB02g07013 Brassica carinata HOM05D007599 ORTHO05D009548 5.1e-12 74.3 84 81.0
CARHR050820 Cardamine hirsuta HOM05D007599 ORTHO05D009548 1.1e-11 73.2 87 75.9
AL2G14680 Arabidopsis lyrata HOM05D007599 ORTHO05D009548 7.3e-11 70.5 84 51.2
AT1G61570 Arabidopsis thaliana HOM05D007599 ORTHO05D009548 6.2e-10 67.4 85 67.1
Lsat_1_v5_gn_3_11180 Lactuca sativa HOM05D007599 ORTHO05D009548 1.4e-09 66.2 86 47.7
EL10Ac5g12394 Beta vulgaris HOM05D007599 ORTHO05D009548 1.8e-09 65.9 84 45.2
AUR62007084 Chenopodium quinoa HOM05D007599 ORTHO05D009548 1.8e-09 65.9 84 51.2
AUR62019947 Chenopodium quinoa HOM05D007599 ORTHO05D009548 1.8e-09 65.9 84 51.2
Sopen10g024670 Solanum pennellii HOM05D007599 ORTHO05D009548 2.4e-09 65.5 85 43.5
Rhsim07G0075900 Rhododendron simsii HOM05D007599 ORTHO05D009548 1.5e-08 62.8 84 73.8
unitig_62.g23260 Utricularia gibba HOM05D007599 ORTHO05D009548 2.0e-08 62.4 82 43.9
Manes.01G000403 Manihot esculenta HOM05D007599 ORTHO05D009548 3.4e-08 61.6 82 75.6
Oeu029803.1 Olea europaea HOM05D007599 ORTHO05D009548 3.4e-08 61.6 85 44.7
GSVIVG01019698001 Vitis vinifera HOM05D007599 ORTHO05D009548 4.4e-08 61.2 87 47.1
BcaC08g45594 Brassica carinata HOM05D007599 ORTHO05D009548 7.6e-08 60.5 87 47.1
HanXRQChr17g0534931 Helianthus annuus HOM05D007599 ORTHO05D009548 9.9e-08 60.1 84 44.0
PSO135G0169 Papaver somniferum HOM05D007599 ORTHO05D009548 1.7e-07 59.3 90 68.9
PSO384G2353 Papaver somniferum HOM05D007599 ORTHO05D009548 1.7e-07 59.3 90 68.9
Solyc08g083380.2 Solanum lycopersicum HOM05D007599 ORTHO05D009548 1.7e-07 59.3 85 43.5
Duzib068G0772 Durio zibethinus HOM05D007599 ORTHO05D009548 2.9e-07 58.5 86 68.6
Os02g0682600 Oryza sativa ssp. japonica HOM05D007599 ORTHO05D009548 2.9e-07 58.5 85 43.5
PGSC0003DMG400012109 Solanum tuberosum HOM05D007599 ORTHO05D009548 3.8e-07 58.2 83 43.4
AagrBONN_evm.TU.Sc2ySwM_117.1837 Anthoceros agrestis HOM05D007599 ORTHO05D009548 6.4e-07 57.4 83 41.0
Cc08_g17030 Coffea canephora HOM05D007599 ORTHO05D009548 6.4e-07 57.4 82 73.2
Manes.02G000300 Manihot esculenta HOM05D007599 ORTHO05D009548 8.4e-07 57.0 82 72.0
Actinidia22230 Actinidia chinensis HOM05D007599 ORTHO05D009548 1.4e-06 56.2 85 55.3
CiPaw.12G074700 Carya illinoinensis HOM05D007599 ORTHO05D009548 1.9e-06 55.8 90 66.7
Ciclev10023088m.g Citrus clementina HOM05D007599 ORTHO05D009548 1.9e-06 55.8 86 50.0
Gohir.D12G243500 Gossypium hirsutum HOM05D007599 ORTHO05D009548 1.9e-06 55.8 84 67.9
Gorai.008G260900 Gossypium raimondii HOM05D007599 ORTHO05D009548 1.9e-06 55.8 84 67.9
Sed0012861 Sechium edule HOM05D007599 ORTHO05D009548 2.4e-06 55.5 80 41.2
Sc07g0010220 Simmondsia chinensis HOM05D007599 ORTHO05D009548 2.4e-06 55.5 90 43.3
TAR374G1499 Trochodendron aralioides HOM05D007599 ORTHO05D009548 2.4e-06 55.5 68 79.4
Migut.E00717 Erythranthe guttata HOM05D007599 ORTHO05D009548 5.4e-06 54.3 66 57.6
ClCG01G001340 Citrullus lanatus HOM05D007599 ORTHO05D009548 9.3e-06 53.5 80 41.2
Gohir.A12G242400 Gossypium hirsutum HOM05D007599 ORTHO05D009548 9.3e-06 53.5 84 46.4
Pp3c25_10700 Physcomitrium patens HOM05D007599 ORTHO05D009548 9.3e-06 53.5 83 50.6


User provided reference genes

Program Settings