Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46872 Brassica carinata HOM05D002856 ORTHO05D021802 1.8e-26 121.7 57 100.0
C01p42220 Brassica napus HOM05D002856 ORTHO05D003246 4.9e-24 113.6 67 85.1
C07p07530 Brassica napus HOM05D000711 ORTHO05D021802 2.7e-14 81.3 57 73.7
BolC7t41171H Brassica oleracea HOM05D000711 ORTHO05D021802 1.0e-13 79.3 57 71.9
C07p17370 Brassica napus HOM05D002856 ORTHO05D021802 3.0e-13 77.8 60 68.3
A04p17260 Brassica napus HOM05D002856 ORTHO05D003246 1.5e-12 75.5 57 70.2
Thhalv10023489m.g Eutrema salsugineum HOM05D002856 ORTHO05D003246 6.9e-10 66.6 53 67.9
BcaC09g49507 Brassica carinata HOM05D002856 ORTHO05D003246 2.0e-09 65.1 53 66.0
C01p35760 Brassica napus HOM05D002856 ORTHO05D003246 2.0e-09 65.1 53 66.0
BolC1t03537H Brassica oleracea HOM05D002856 ORTHO05D003246 2.0e-09 65.1 53 66.0
BraA01t02951Z Brassica rapa HOM05D002856 ORTHO05D003246 2.0e-09 65.1 53 66.0
Sp2g05450 Schrenkiella parvula HOM05D002856 ORTHO05D003246 2.0e-09 65.1 53 66.0
AL2G18080 Arabidopsis lyrata HOM05D002856 ORTHO05D003246 3.4e-09 64.3 53 66.0
BcaB04g20187 Brassica carinata HOM05D002856 ORTHO05D003246 4.5e-09 63.9 53 64.2
A01p28190 Brassica napus HOM05D002856 ORTHO05D003246 5.9e-09 63.5 53 66.0
AT1G58120 Arabidopsis thaliana HOM05D002856 ORTHO05D003246 7.7e-09 63.2 53 64.2
BolC9t54028H Brassica oleracea HOM05D002856 ORTHO05D017644 7.7e-09 63.2 53 62.3
CARHR053920 Cardamine hirsuta HOM05D002856 ORTHO05D003246 1.3e-08 62.4 53 62.3
BcaC04g22118 Brassica carinata HOM05D002856 ORTHO05D003246 1.7e-08 62.0 53 60.4
A09p18530 Brassica napus HOM05D002856 ORTHO05D003246 1.7e-08 62.0 53 60.4
C09p23140 Brassica napus HOM05D002856 ORTHO05D003246 1.7e-08 62.0 53 60.4
BolC9t55233H Brassica oleracea HOM05D002856 ORTHO05D003246 1.7e-08 62.0 53 60.4
BraA09t37479Z Brassica rapa HOM05D002856 ORTHO05D003246 1.7e-08 62.0 53 60.4
A02p34410 Brassica napus HOM05D002856 ORTHO05D017644 2.2e-08 61.6 53 60.4
BraA02t08452Z Brassica rapa HOM05D002856 ORTHO05D017644 2.2e-08 61.6 53 60.4
Carub.0002s0649 Capsella rubella HOM05D002856 ORTHO05D003246 2.2e-08 61.6 53 64.2
BcaB01g03465 Brassica carinata HOM05D000039 ORTHO05D000370 7.2e-07 56.6 31 83.9
BcaB04g17075 Brassica carinata HOM05D002856 ORTHO05D021802 7.2e-07 56.6 31 83.9
Aa31LG2G10970 Aethionema arabicum HOM05D002856 ORTHO05D003246 9.4e-07 56.2 53 60.4


User provided reference genes

Program Settings