Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46815 Brassica carinata HOM05D042178 ORTHO05D039558 7.6e-73 276.9 129 100.0
C06p53990 Brassica napus HOM05D000209 ORTHO05D000129 5.0e-40 167.9 92 87.0
C06p53120 Brassica napus HOM05D042178 ORTHO05D039558 1.5e-39 166.4 92 84.8
A07p45150 Brassica napus HOM05D000209 ORTHO05D000129 2.2e-27 125.9 71 84.5
BcaC08g47488 Brassica carinata HOM05D042178 ORTHO05D000129 8.6e-24 114.0 123 54.5
BcaC06g36637 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-21 106.3 92 66.3
BcaC06g36638 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-21 106.3 92 66.3
BolC7t40602H Brassica oleracea HOM05D000209 ORTHO05D000129 1.8e-21 106.3 92 66.3
BcaC08g46165 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-17 93.2 84 60.7
C06p42890 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-17 93.2 84 60.7
BraA07t32018Z Brassica rapa HOM05D000209 ORTHO05D000129 1.3e-16 90.1 90 55.6
BcaC06g30886 Brassica carinata HOM05D000209 ORTHO05D000129 2.5e-15 85.9 81 56.8
BcaB02g07277 Brassica carinata HOM05D000209 ORTHO05D000129 6.2e-14 81.3 89 58.4
AL3G27510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.3e-11 73.6 82 48.8
Thhalv10009753m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.2e-11 72.8 91 42.9
C06p42110 Brassica napus HOM05D000209 ORTHO05D000129 2.9e-11 72.4 80 51.2
CARHR092000 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.9e-11 71.6 83 39.8
AL3G33370 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.4e-11 71.2 87 46.0
AL275U10020 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.3e-11 70.9 95 45.3
AL3G33690 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.3e-11 70.9 102 46.1
Carub.0004s0575 Capsella rubella HOM05D000209 ORTHO05D000129 8.3e-11 70.9 82 51.2
Carub.0003s2963 Capsella rubella HOM05D000209 ORTHO05D000129 1.4e-10 70.1 90 43.3
AL3G29670 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.4e-10 69.3 82 41.5
AL3G33700 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.1e-10 68.6 83 50.6
AT3G20030 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.0e-10 67.8 99 46.5
BolC6t39213H Brassica oleracea HOM05D000209 ORTHO05D000129 7.0e-10 67.8 81 50.6
BraA06t27254Z Brassica rapa HOM05D000209 ORTHO05D000129 7.0e-10 67.8 83 47.0
BcaB04g19044 Brassica carinata HOM05D000209 ORTHO05D000129 9.2e-10 67.4 89 42.7
AL1G39630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-09 67.0 82 46.3
AT3G16740 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.2e-09 67.0 82 39.0
A06p43760 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-09 67.0 83 47.0
Carub.0003s1761 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-09 67.0 83 41.0
Carub.0001s2536 Capsella rubella HOM05D000209 ORTHO05D000129 1.6e-09 66.6 81 49.4
Carub.0003s1975 Capsella rubella HOM05D000209 ORTHO05D000129 1.6e-09 66.6 99 43.4
BcaC09g48938 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-09 66.2 95 43.2
C01p44310 Brassica napus HOM05D000209 ORTHO05D000129 2.0e-09 66.2 95 43.2
AT3G17480 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.7e-09 65.9 98 41.8
BolC1t04392H Brassica oleracea HOM05D000209 ORTHO05D000129 2.7e-09 65.9 95 43.2
CARHR088870 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.7e-09 65.9 87 46.0
AL2G18650 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.6e-09 65.1 115 39.1
AT2G17830 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.6e-09 65.1 82 42.7
AT3G17320 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.6e-09 65.1 96 41.7
Carub.0003s1362 Capsella rubella HOM05D000209 ORTHO05D000129 6.0e-09 64.7 96 41.7
Carub.0003s2032 Capsella rubella HOM05D000209 ORTHO05D000129 6.0e-09 64.7 89 49.4
BcaC06g34071 Brassica carinata HOM05D000209 ORTHO05D000129 7.8e-09 64.3 83 44.6
BcaC09g48650 Brassica carinata HOM05D000209 ORTHO05D000129 7.8e-09 64.3 85 42.4
BolC7t43814H Brassica oleracea HOM05D000209 ORTHO05D000129 7.8e-09 64.3 83 44.6
BraA07t31068Z Brassica rapa HOM05D000209 ORTHO05D000129 7.8e-09 64.3 81 45.7
BcaC02g07401 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-08 63.9 91 42.9
A03p41270 Brassica napus HOM05D000209 ORTHO05D000129 1.0e-08 63.9 89 40.4
BraA03t13281Z Brassica rapa HOM05D000209 ORTHO05D000129 1.0e-08 63.9 89 40.4
A07p34400 Brassica napus HOM05D000209 ORTHO05D000129 1.3e-08 63.5 81 45.7
Carub.0001s1047 Capsella rubella HOM05D000209 ORTHO05D000129 1.3e-08 63.5 83 48.2
Carub.0003s3197 Capsella rubella HOM05D000209 ORTHO05D000129 1.3e-08 63.5 86 43.0
CARHR260760 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.3e-08 63.5 85 42.4
BcaB07g32803 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-08 63.2 93 38.7
A03p41290 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-08 63.2 89 41.6
BraA03t13283Z Brassica rapa HOM05D000209 ORTHO05D000129 1.7e-08 63.2 89 41.6
CARHR134370 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.7e-08 63.2 87 43.7
BcaB01g02719 Brassica carinata HOM05D000209 ORTHO05D000129 2.3e-08 62.8 87 42.5
BraA04t18465Z Brassica rapa HOM05D000209 ORTHO05D000129 2.3e-08 62.8 89 43.8
AL1G21870 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.0e-08 62.4 82 45.1
BolC5t33690H Brassica oleracea HOM05D000209 ORTHO05D000129 3.0e-08 62.4 92 38.0
CARHR092630 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.0e-08 62.4 98 40.8
CARHR140970 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.0e-08 62.4 110 34.5
CARHR213520 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.0e-08 62.4 92 39.1
Thhalv10023848m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.0e-08 62.4 82 42.7
AL1G35700 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.9e-08 62.0 88 39.8
AT2G18780 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.9e-08 62.0 99 38.4
BraA03t13297Z Brassica rapa HOM05D000209 ORTHO05D000129 3.9e-08 62.0 79 48.1
AL3G53140 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.0e-08 61.6 102 40.2
AL7G17020 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.0e-08 61.6 73 45.2
AT5G60560 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.0e-08 61.6 87 44.8
CARHR092620 Cardamine hirsuta HOM05D000209 ORTHO05D000129 6.6e-08 61.2 93 43.0
AT1G24800 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.6e-08 60.8 100 43.0
AT1G24881 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.6e-08 60.8 100 43.0
AT1G25055 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.6e-08 60.8 100 43.0
AT1G25150 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.6e-08 60.8 100 43.0
AT1G25211 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.6e-08 60.8 100 43.0
CARHR223800 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.6e-08 60.8 85 42.4
AL3G25930 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.1e-07 60.5 79 46.8
AL3G40130 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.1e-07 60.5 80 38.8
BcaB06g25776 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-07 60.5 88 38.6
C07p41000 Brassica napus HOM05D000209 ORTHO05D000129 1.1e-07 60.5 89 43.8
BolC7t44630H Brassica oleracea HOM05D000209 ORTHO05D000129 1.1e-07 60.5 89 43.8
BraA10t43735Z Brassica rapa HOM05D000209 ORTHO05D000129 1.1e-07 60.5 87 44.8
BcaC05g28838 Brassica carinata HOM05D000209 ORTHO05D000129 1.5e-07 60.1 92 37.0
C03p50730 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-07 60.1 79 45.6
BolC9t58027H Brassica oleracea HOM05D000209 ORTHO05D000129 1.9e-07 59.7 87 43.7
Thhalv10009814m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.9e-07 59.7 87 36.8
BolC3t17361H Brassica oleracea HOM05D000209 ORTHO05D000129 2.5e-07 59.3 79 45.6
AL3G29750 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.3e-07 58.9 77 39.0
BcaC04g19787 Brassica carinata HOM05D000209 ORTHO05D000129 4.3e-07 58.5 84 45.2
BraA03t12579Z Brassica rapa HOM05D000209 ORTHO05D000129 4.3e-07 58.5 86 41.9
AT3G13680 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.3e-07 57.8 82 42.7
BcaC06g34070 Brassica carinata HOM05D000209 ORTHO05D000129 7.3e-07 57.8 75 42.7
A01p38090 Brassica napus HOM05D000209 ORTHO05D000129 7.3e-07 57.8 82 41.5
A06p43770 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-06 57.0 83 42.2
C06p45010 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-06 57.0 57 49.1
BraA01t04017Z Brassica rapa HOM05D000209 ORTHO05D000129 1.2e-06 57.0 82 43.9
Carub.0003s1310 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-06 57.0 82 40.2
CARHR107830 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.2e-06 57.0 98 31.6
AL7G39300 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.6e-06 56.6 86 38.4
Carub.0006s2303 Capsella rubella HOM05D000209 ORTHO05D000129 1.6e-06 56.6 80 36.2
AT3G17620 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.1e-06 56.2 85 41.2
BcaB04g20819 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-06 56.2 75 38.7
BolC1t04790H Brassica oleracea HOM05D000209 ORTHO05D000129 2.1e-06 56.2 84 40.5
Thhalv10022089m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.1e-06 56.2 88 36.4
Thhalv10024142m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.1e-06 56.2 82 41.5
AT3G24580 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.8e-06 55.8 80 37.5
AT5G42460 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.8e-06 55.8 82 37.8
BcaB04g20882 Brassica carinata HOM05D000209 ORTHO05D000129 2.8e-06 55.8 80 41.2
C01p48270 Brassica napus HOM05D000209 ORTHO05D000129 2.8e-06 55.8 84 40.5
Thhalv10000638m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.8e-06 55.8 87 41.4
Thhalv10021925m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.8e-06 55.8 98 35.7
AL3G25710 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-06 55.5 82 40.2
BcaC09g48335 Brassica carinata HOM05D000209 ORTHO05D000129 3.6e-06 55.5 92 39.1
C01p51240 Brassica napus HOM05D000209 ORTHO05D000129 3.6e-06 55.5 92 39.1
BolC1t05079H Brassica oleracea HOM05D000209 ORTHO05D000129 3.6e-06 55.5 92 39.1
BolC3t16425H Brassica oleracea HOM05D000209 ORTHO05D000129 3.6e-06 55.5 86 41.9
Thhalv10001171m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.6e-06 55.5 81 44.4
AL3G53160 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.7e-06 55.1 83 44.6
A03p36190 Brassica napus HOM05D000209 ORTHO05D000129 4.7e-06 55.1 82 39.0
BraA03t12790Z Brassica rapa HOM05D000209 ORTHO05D000129 4.7e-06 55.1 82 39.0
BraA06t27255Z Brassica rapa HOM05D000209 ORTHO05D000129 4.7e-06 55.1 83 41.0
Carub.0003s1313 Capsella rubella HOM05D000209 ORTHO05D000129 4.7e-06 55.1 82 39.0
BolC6t39559H Brassica oleracea HOM05D000209 ORTHO05D000129 6.2e-06 54.7 42 59.5
Carub.0003s2294 Capsella rubella HOM05D000209 ORTHO05D000129 6.2e-06 54.7 79 39.2
AL3G51580 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.1e-06 54.3 89 37.1
BcaB04g18933 Brassica carinata HOM05D000209 ORTHO05D000129 8.1e-06 54.3 81 42.0
CARHR026350 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.1e-06 54.3 85 42.4


User provided reference genes

Program Settings