Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46797 Brassica carinata HOM05D000889 ORTHO05D000693 1.7e-42 175.6 89 100.0
BcaB03g15082 Brassica carinata HOM05D000889 ORTHO05D000693 3.1e-25 118.2 57 100.0
BcaB03g15083 Brassica carinata HOM05D000889 ORTHO05D000693 3.1e-25 118.2 57 100.0
BolC6t39827H Brassica oleracea HOM05D000889 ORTHO05D000693 3.4e-19 98.2 56 83.9
A07p39630 Brassica napus HOM05D000889 ORTHO05D000693 2.2e-18 95.5 56 83.9
BraA07t31512Z Brassica rapa HOM05D000889 ORTHO05D000693 2.2e-18 95.5 56 83.9
BcaC08g46796 Brassica carinata HOM05D000889 ORTHO05D000693 2.8e-18 95.1 56 82.1
C06p47920 Brassica napus HOM05D000889 ORTHO05D000693 2.8e-18 95.1 56 82.1
AT1G73780 Arabidopsis thaliana HOM05D000889 ORTHO05D000693 4.5e-16 87.8 56 73.2
BcaC03g15461 Brassica carinata HOM05D000889 ORTHO05D000693 1.1e-14 83.2 56 69.6
C02p31420 Brassica napus HOM05D000889 ORTHO05D000693 1.1e-14 83.2 56 69.6
BolC2t09175H Brassica oleracea HOM05D000889 ORTHO05D000693 1.1e-14 83.2 56 69.6
AL2G33590 Arabidopsis lyrata HOM05D000889 ORTHO05D000693 1.5e-14 82.8 56 69.6
Carub.0002s2053 Capsella rubella HOM05D000889 ORTHO05D000693 3.3e-14 81.6 57 70.2
A02p18890 Brassica napus HOM05D000889 ORTHO05D000693 5.5e-14 80.9 56 69.6
BraA02t06933Z Brassica rapa HOM05D000889 ORTHO05D000693 9.5e-14 80.1 56 69.6
Sp5g28970 Schrenkiella parvula HOM05D004624 ORTHO05D005357 2.1e-13 79.0 56 67.9
Thhalv10019361m.g Eutrema salsugineum HOM05D000889 ORTHO05D000693 6.1e-13 77.4 56 69.6
Aa31LG4G4110 Aethionema arabicum HOM05D000889 ORTHO05D000693 1.4e-12 76.3 56 66.1
CARHR066860 Cardamine hirsuta HOM05D000889 ORTHO05D000693 8.9e-12 73.6 56 64.3
BcaB05g24813 Brassica carinata HOM05D000889 ORTHO05D000693 5.7e-11 70.9 56 60.7
THA.LOC109116626 Tarenaya hassleriana HOM05D000889 ORTHO05D000693 1.9e-06 55.8 60 48.3


User provided reference genes

Program Settings