Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46750 Brassica carinata HOM05D000535 ORTHO05D000427 1.6e-61 239.2 115 100.0
BolC6t39785H Brassica oleracea HOM05D000535 ORTHO05D000427 1.2e-58 229.6 116 97.4
C06p47450 Brassica napus HOM05D000535 ORTHO05D000427 3.2e-54 214.9 116 89.7
BolC6t39788H Brassica oleracea HOM05D000535 ORTHO05D000427 3.2e-54 214.9 116 89.7
C06p47490 Brassica napus HOM05D000535 ORTHO05D000427 4.6e-53 211.1 116 87.9
BcaB03g15046 Brassica carinata HOM05D000535 ORTHO05D000427 2.3e-52 208.8 116 87.1
BcaB03g15045 Brassica carinata HOM05D000535 ORTHO05D000427 6.6e-52 207.2 116 87.1
A07p39270 Brassica napus HOM05D000535 ORTHO05D000427 5.3e-49 197.6 116 85.3
BraA07t31474Z Brassica rapa HOM05D000535 ORTHO05D000427 5.3e-49 197.6 116 85.3
BcaC08g46753 Brassica carinata HOM05D000535 ORTHO05D000427 9.3e-46 186.8 96 90.6
BcaB07g33694 Brassica carinata HOM05D000535 ORTHO05D000427 8.7e-28 127.1 116 60.3
BolC2t09143H Brassica oleracea HOM05D000535 ORTHO05D000427 4.3e-27 124.8 117 59.8
BolC6t39780H Brassica oleracea HOM05D000535 ORTHO05D000427 4.3e-27 124.8 116 58.6
C02p30960 Brassica napus HOM05D000535 ORTHO05D000427 7.4e-27 124.0 117 59.8
C02p31000 Brassica napus HOM05D000535 ORTHO05D000427 1.3e-26 123.2 115 54.8
BcaC08g46745 Brassica carinata HOM05D000535 ORTHO05D000427 2.1e-26 122.5 116 57.8
BcaB03g15040 Brassica carinata HOM05D000535 ORTHO05D000427 2.8e-26 122.1 116 56.9
C06p47420 Brassica napus HOM05D000535 ORTHO05D000427 4.8e-26 121.3 116 57.8
BolC2t09148H Brassica oleracea HOM05D000535 ORTHO05D000427 1.8e-25 119.4 115 53.0
BolC6t39783H Brassica oleracea HOM05D000535 ORTHO05D000427 2.4e-25 119.0 116 56.0
A07p39220 Brassica napus HOM05D000535 ORTHO05D000427 3.1e-25 118.6 116 58.6
BraA07t31472Z Brassica rapa HOM05D000535 ORTHO05D000427 3.1e-25 118.6 116 58.6
BcaC08g46748 Brassica carinata HOM05D000535 ORTHO05D000427 4.1e-25 118.2 116 56.0
C06p47430 Brassica napus HOM05D000535 ORTHO05D000427 1.5e-24 116.3 112 55.4
BolC6t39781H Brassica oleracea HOM05D000535 ORTHO05D000427 2.6e-24 115.5 112 54.5
BcaB03g15042 Brassica carinata HOM05D000535 ORTHO05D000427 1.3e-23 113.2 118 56.8
A07p39230 Brassica napus HOM05D000535 ORTHO05D000427 1.3e-23 113.2 112 55.4
BcaC08g46747 Brassica carinata HOM05D000535 ORTHO05D000427 1.7e-23 112.8 112 53.6
BraA07t31473Z Brassica rapa HOM05D000535 ORTHO05D000427 1.9e-22 109.4 118 54.2
BcaB03g15044 Brassica carinata HOM05D000535 ORTHO05D000427 5.5e-22 107.8 118 52.5
A02p18600 Brassica napus HOM05D000535 ORTHO05D000427 7.2e-22 107.5 117 54.7
BolC2t09133H Brassica oleracea HOM05D000535 ORTHO05D000427 7.2e-22 107.5 116 54.3
BraA02t06900Z Brassica rapa HOM05D000535 ORTHO05D000427 7.2e-22 107.5 117 54.7
A02p18650 Brassica napus HOM05D000535 ORTHO05D000427 9.3e-22 107.1 118 54.2
BolC9t55136H Brassica oleracea HOM05D000535 ORTHO05D000427 9.3e-22 107.1 102 54.9
BraA02t06908Z Brassica rapa HOM05D000535 ORTHO05D000427 9.3e-22 107.1 118 54.2
BcaC04g22195 Brassica carinata HOM05D000535 ORTHO05D000427 1.6e-21 106.3 102 54.9
BolC2t09139H Brassica oleracea HOM05D000535 ORTHO05D000427 1.6e-21 106.3 118 53.4
A07p39240 Brassica napus HOM05D000535 ORTHO05D000427 2.1e-21 105.9 118 54.2
BraA09t37420Z Brassica rapa HOM05D000535 ORTHO05D000427 7.9e-21 104.0 102 52.9
C09p22220 Brassica napus HOM05D000535 ORTHO05D000427 1.3e-20 103.2 102 53.9
BraA07t31471Z Brassica rapa HOM05D000535 ORTHO05D000427 3.0e-20 102.1 109 53.2
A02p18610 Brassica napus HOM05D000535 ORTHO05D000427 3.3e-19 98.6 117 50.4
A02p18660 Brassica napus HOM05D000535 ORTHO05D000427 4.3e-19 98.2 111 50.5
A09p17870 Brassica napus HOM05D000535 ORTHO05D000427 4.3e-19 98.2 106 50.9
BraA02t06909Z Brassica rapa HOM05D000535 ORTHO05D000427 4.3e-19 98.2 111 50.5
C02p30930 Brassica napus HOM05D000535 ORTHO05D000427 7.4e-19 97.4 111 50.5
BolC2t09134H Brassica oleracea HOM05D000535 ORTHO05D000427 1.3e-18 96.7 119 52.1
BcaC08g46752 Brassica carinata HOM05D000535 ORTHO05D000427 2.2e-18 95.9 116 52.6
BolC6t39786H Brassica oleracea HOM05D000535 ORTHO05D000427 2.2e-18 95.9 116 52.6
BcaB03g12616 Brassica carinata HOM05D000535 ORTHO05D000427 3.1e-17 92.0 116 46.6
A02p18640 Brassica napus HOM05D000535 ORTHO05D000427 4.1e-17 91.7 104 49.0
AL2G33060 Arabidopsis lyrata HOM05D000535 ORTHO05D000427 6.9e-17 90.9 117 48.7
C02p30890 Brassica napus HOM05D000535 ORTHO05D000427 5.9e-16 87.8 111 48.6
BolC2t09142H Brassica oleracea HOM05D000535 ORTHO05D000427 1.3e-15 86.7 114 43.0
C02p30760 Brassica napus HOM05D000535 ORTHO05D000427 3.8e-15 85.1 117 48.7
AT1G73260 Arabidopsis thaliana HOM05D000535 ORTHO05D000427 1.4e-14 83.2 117 48.7
C02p30970 Brassica napus HOM05D000535 ORTHO05D000427 2.5e-14 82.4 117 45.3
BcaB07g31187 Brassica carinata HOM05D000115 ORTHO05D000427 3.2e-14 82.0 67 55.2
C06p47480 Brassica napus HOM05D000535 ORTHO05D000427 5.5e-14 81.3 105 47.6
Carub.0002s2005 Capsella rubella HOM05D000535 ORTHO05D000427 1.6e-13 79.7 117 47.0
C02p30820 Brassica napus HOM05D000535 ORTHO05D000427 6.1e-13 77.8 91 48.4
Sp5g28240 Schrenkiella parvula HOM05D000535 ORTHO05D000427 6.1e-13 77.8 118 43.2
BraA08t32905Z Brassica rapa HOM05D000535 ORTHO05D000427 1.8e-12 76.3 116 42.2
Aa31LG4G3540 Aethionema arabicum HOM05D000535 ORTHO05D000427 3.0e-12 75.5 115 46.1
Sp5g28230 Schrenkiella parvula HOM05D000535 ORTHO05D000427 5.1e-12 74.7 117 45.3
BraA07t30625Z Brassica rapa HOM05D000535 ORTHO05D000427 8.8e-12 73.9 114 45.6
BolC2t09147H Brassica oleracea HOM05D000535 ORTHO05D000427 1.1e-11 73.6 104 43.3
BcaC08g45656 Brassica carinata HOM05D000535 ORTHO05D000427 1.5e-11 73.2 117 45.3
A07p29870 Brassica napus HOM05D000535 ORTHO05D000427 1.5e-11 73.2 115 45.2
C06p34120 Brassica napus HOM05D000535 ORTHO05D000427 1.5e-11 73.2 117 45.3
C06p47400 Brassica napus HOM05D000535 ORTHO05D000427 2.0e-11 72.8 115 45.2
BcaB03g15038 Brassica carinata HOM05D000535 ORTHO05D000427 3.3e-11 72.0 112 46.4
BolC6t38525H Brassica oleracea HOM05D000535 ORTHO05D000427 3.3e-11 72.0 115 45.2
BcaB03g15702 Brassica carinata HOM05D000535 ORTHO05D000427 5.7e-11 71.2 115 45.2
C06p34110 Brassica napus HOM05D000535 ORTHO05D000427 9.7e-11 70.5 115 44.3
Thhalv10019151m.g Eutrema salsugineum HOM05D000535 ORTHO05D000427 1.3e-10 70.1 116 44.0
BcaB03g15704 Brassica carinata HOM05D000535 ORTHO05D000427 2.2e-10 69.3 115 44.3
BraA07t31470Z Brassica rapa HOM05D000535 ORTHO05D000427 2.2e-10 69.3 115 44.3
BcaC08g45653 Brassica carinata HOM05D000535 ORTHO05D000427 3.7e-10 68.6 115 43.5
CARHR066280 Cardamine hirsuta HOM05D000535 ORTHO05D000427 4.8e-10 68.2 110 43.6
BcaB03g15701 Brassica carinata HOM05D000535 ORTHO05D000427 6.3e-10 67.8 117 43.6
BcaC08g45655 Brassica carinata HOM05D000535 ORTHO05D000427 6.3e-10 67.8 117 43.6
C02p30950 Brassica napus HOM05D000535 ORTHO05D000427 6.3e-10 67.8 90 46.7
A07p39210 Brassica napus HOM05D000535 ORTHO05D000427 8.2e-10 67.4 115 43.5
THA.LOC104811423 Tarenaya hassleriana HOM05D000535 ORTHO05D000427 1.4e-09 66.6 118 39.8
Aa31LG4G3570 Aethionema arabicum HOM05D000535 ORTHO05D000427 9.1e-09 63.9 117 38.5
Aa31LG4G3560 Aethionema arabicum HOM05D000535 ORTHO05D000427 1.2e-08 63.5 111 38.7
BraA02t06907Z Brassica rapa HOM05D000535 ORTHO05D000427 2.6e-08 62.4 76 46.1
A02p18680 Brassica napus HOM05D000535 ORTHO05D000427 1.0e-07 60.5 82 52.4
BraA02t06910Z Brassica rapa HOM05D000535 ORTHO05D000427 1.0e-07 60.5 82 52.4
BolC2t09141H Brassica oleracea HOM05D000535 ORTHO05D000427 1.7e-07 59.7 51 58.8
BolC2t09149H Brassica oleracea HOM05D000535 ORTHO05D000427 2.2e-07 59.3 91 46.2
C02p30880 Brassica napus HOM05D014798 ORTHO05D000427 2.5e-06 55.8 43 55.8
THA.LOC104813238 Tarenaya hassleriana HOM05D000535 ORTHO05D000427 2.5e-06 55.8 118 33.1
BcaC08g46744 Brassica carinata HOM05D000535 ORTHO05D000427 4.2e-06 55.1 115 40.9


User provided reference genes

Program Settings