Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-47 192.2 93 100.0
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 1.8e-31 139.0 69 100.0
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 1.8e-31 139.0 69 100.0
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 8.3e-29 130.2 78 80.8
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 8.3e-29 130.2 78 80.8
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 9.2e-28 126.7 78 79.5
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 3.5e-27 124.8 78 76.9
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 4.6e-27 124.4 78 78.2
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 4.6e-27 124.4 78 78.2
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 5.6e-25 117.5 78 74.4
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 7.3e-25 117.1 88 65.9
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 2.8e-24 115.2 78 70.5
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 2.8e-24 115.2 78 69.2
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 8.9e-23 110.2 81 65.4
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 8.9e-23 110.2 81 65.4
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 2.9e-21 105.1 69 73.9
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 2.9e-21 105.1 69 73.9
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 6.6e-18 94.0 80 61.2
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 8.6e-18 93.6 61 72.1
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 8.6e-18 93.6 61 72.1
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 3.3e-17 91.7 64 65.6
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 9.6e-17 90.1 64 67.2
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 2.8e-16 88.6 80 56.2
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 2.4e-15 85.5 81 53.1
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 5.2e-15 84.3 61 70.5
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 8.9e-15 83.6 66 63.6
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 5.8e-14 80.9 80 53.8
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 2.2e-13 79.0 80 50.0
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 2.2e-13 79.0 80 50.0
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 6.4e-13 77.4 80 47.5
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 6.4e-13 77.4 80 47.5
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 6.4e-13 77.4 63 66.7
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 6.4e-13 77.4 63 66.7
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 6.4e-13 77.4 63 66.7
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 8.4e-13 77.0 66 62.1
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-12 76.3 80 47.5
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-12 76.3 80 48.8
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 4.2e-12 74.7 64 62.5
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 5.4e-12 74.3 71 57.7
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 5.4e-12 74.3 71 57.7
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 7.1e-12 73.9 80 47.5
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 7.1e-12 73.9 80 47.5
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 9.3e-12 73.6 71 57.7
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 9.3e-12 73.6 71 57.7
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 9.3e-12 73.6 71 57.7
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-11 73.2 64 60.9
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 1.2e-11 73.2 71 57.7
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 1.2e-11 73.2 64 60.9
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 1.2e-11 73.2 71 57.7
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 1.6e-11 72.8 66 51.5
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 1.6e-11 72.8 66 51.5
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 1.6e-11 72.8 66 51.5
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 1.6e-11 72.8 66 51.5
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 1.6e-11 72.8 66 51.5
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 1.6e-11 72.8 66 51.5
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 2.1e-11 72.4 71 56.3
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 3.5e-11 71.6 79 54.4
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 6.0e-11 70.9 57 57.9
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-10 69.7 68 55.9
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-10 69.7 68 55.9
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-10 69.7 68 55.9
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 1.3e-10 69.7 81 53.1
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 2.5e-09 65.5 65 56.9
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 2.5e-09 65.5 65 56.9
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 2.5e-09 65.5 65 56.9
C06p46620 Brassica napus HOM05D007344 ORTHO05D009010 2.5e-09 65.5 43 69.8
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 2.5e-09 65.5 65 56.9
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 2.5e-09 65.5 65 56.9
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 2.5e-09 65.5 71 45.1
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 2.8e-08 62.0 66 56.1
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 4.8e-08 61.2 80 47.5
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 4.8e-08 61.2 80 46.2
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 8.1e-08 60.5 67 53.7
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 8.1e-08 60.5 67 53.7
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 1.8e-07 59.3 67 49.3
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 1.8e-07 59.3 67 49.3
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 1.8e-07 59.3 67 49.3
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 5.3e-07 57.8 67 50.7
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 5.3e-07 57.8 67 50.7


User provided reference genes

Program Settings