Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46627 Brassica carinata HOM05D010479 ORTHO05D007393 1.7e-85 319.3 165 100.0
BolC6t39652H Brassica oleracea HOM05D010479 ORTHO05D007393 1.5e-84 316.2 165 98.8
BraA07t31373Z Brassica rapa HOM05D010479 ORTHO05D007393 4.1e-79 298.1 165 93.3
C06p45990 Brassica napus HOM05D004678 ORTHO05D005880 6.5e-77 290.8 153 98.0
A07p38090 Brassica napus HOM05D004678 ORTHO05D005880 3.5e-70 268.5 149 92.6
BcaB03g14909 Brassica carinata HOM05D010479 ORTHO05D007393 1.5e-65 253.1 171 83.0
BcaB03g14911 Brassica carinata HOM05D010479 ORTHO05D007393 1.5e-65 253.1 171 83.0
Thhalv10019217m.g Eutrema salsugineum HOM05D010479 ORTHO05D007393 4.6e-62 241.5 175 76.6
Sp5g26980 Schrenkiella parvula HOM05D010479 ORTHO05D007393 1.8e-58 229.6 175 73.7
AL2G31520 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 1.4e-50 203.4 175 70.9
CARHR064730 Cardamine hirsuta HOM05D010479 ORTHO05D007393 1.4e-50 203.4 177 71.2
AT1G71910 Arabidopsis thaliana HOM05D010479 ORTHO05D007393 5.2e-50 201.4 175 69.7
BcaB03g14910 Brassica carinata HOM05D010479 ORTHO05D007393 3.4e-49 198.7 119 88.2
BraA07t30685Z Brassica rapa HOM05D001833 ORTHO05D001776 2.1e-46 189.5 175 67.4
Carub.0002s1869 Capsella rubella HOM05D010479 ORTHO05D007393 3.5e-46 188.7 180 63.3
BcaC03g15309 Brassica carinata HOM05D010479 ORTHO05D007393 6.0e-46 188.0 170 69.4
BolC2t08970H Brassica oleracea HOM05D010479 ORTHO05D007393 6.0e-46 188.0 170 69.4
A07p30490 Brassica napus HOM05D001833 ORTHO05D001776 8.1e-43 177.6 175 65.1
BcaB05g24691 Brassica carinata HOM05D010479 ORTHO05D007393 1.1e-42 177.2 172 64.5
BcaB03g15625 Brassica carinata HOM05D010479 ORTHO05D007393 1.8e-42 176.4 170 63.5
C06p35260 Brassica napus HOM05D001833 ORTHO05D001776 2.3e-42 176.0 174 64.9
BcaB03g15626 Brassica carinata HOM05D010479 ORTHO05D007393 1.3e-37 160.2 173 62.4
BcaC08g45747 Brassica carinata HOM05D010479 ORTHO05D007393 1.3e-37 160.2 173 62.4
C02p29210 Brassica napus HOM05D004678 ORTHO05D005880 1.3e-37 160.2 175 61.7
AL106U10030 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 2.1e-30 136.3 116 69.8
BraA02t06800Z Brassica rapa HOM05D004678 ORTHO05D005880 6.6e-29 131.3 169 56.8
A02p17560 Brassica napus HOM05D004678 ORTHO05D005880 3.3e-28 129.0 136 62.5
Aa31LG4G8710 Aethionema arabicum HOM05D010479 ORTHO05D007393 5.6e-28 128.3 165 53.3
THA.LOC104810516 Tarenaya hassleriana HOM05D010479 ORTHO05D007393 1.6e-22 110.2 174 48.9
BolC6t38631H Brassica oleracea HOM05D001833 ORTHO05D001776 1.0e-21 107.5 94 71.3
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 1.1e-10 70.9 173 36.4
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 7.6e-09 64.7 165 33.3
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 1.3e-08 63.9 185 33.5
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 1.1e-07 60.8 165 38.2
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 5.5e-07 58.5 173 31.2
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 7.1e-07 58.2 166 33.1
THA.LOC104809743 Tarenaya hassleriana HOM05D000010 ORTHO05D000063 7.1e-07 58.2 162 37.7
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 1.2e-06 57.4 161 34.8


User provided reference genes

Program Settings