Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 2.7e-103 378.6 186 100.0
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 1.1e-101 373.2 186 97.8
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 9.6e-101 370.2 186 96.8
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 1.4e-99 366.3 186 95.2
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 1.2e-98 363.2 186 94.6
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 5.8e-90 334.3 181 89.0
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.2e-87 326.6 181 85.6
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.2e-87 326.6 181 85.6
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 6.7e-86 320.9 182 85.2
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 6.7e-86 320.9 182 85.2
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 1.5e-85 319.7 181 84.0
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 3.3e-85 318.5 184 82.6
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 1.6e-84 316.2 181 83.4
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 3.7e-84 315.1 182 84.1
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 4.0e-83 311.6 181 82.9
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 9.0e-83 310.5 182 83.0
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 9.0e-83 310.5 182 83.0
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 2.2e-81 305.8 181 79.0
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 4.2e-80 301.6 181 81.8
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 5.5e-80 301.2 180 77.8
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 4.8e-76 288.1 199 76.9
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 2.4e-67 259.2 188 65.4
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 1.2e-66 256.9 188 64.4
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 1.3e-65 253.4 189 64.6
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 1.7e-65 253.1 189 65.1
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 6.5e-65 251.1 181 65.2
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 1.4e-64 250.0 184 64.1
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 1.9e-64 249.6 183 62.8
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 3.2e-64 248.8 169 67.5
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 3.2e-64 248.8 184 64.1
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 1.2e-63 246.9 181 65.2
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 2.7e-63 245.7 184 63.0
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 6.1e-63 244.6 183 65.6
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 7.9e-63 244.2 186 64.5
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 7.9e-63 244.2 170 67.6
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 1.0e-62 243.8 170 66.5
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 1.8e-62 243.0 185 62.2
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 3.9e-62 241.9 186 63.4
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 3.9e-62 241.9 186 63.4
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 6.7e-62 241.1 181 63.0
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 6.7e-62 241.1 185 63.2
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 8.8e-62 240.7 174 62.6
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 1.1e-61 240.4 183 64.5
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 1.5e-61 240.0 177 65.0
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 2.0e-61 239.6 196 61.2
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 3.3e-61 238.8 183 64.5
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 3.3e-61 238.8 172 65.1
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 5.7e-61 238.0 188 61.2
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 5.7e-61 238.0 181 62.4
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 5.7e-61 238.0 181 61.9
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 5.7e-61 238.0 180 63.9
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 7.4e-61 237.7 173 62.4
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 7.4e-61 237.7 184 62.5
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 1.7e-60 236.5 182 62.1
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 2.8e-60 235.7 183 63.4
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 3.7e-60 235.3 181 63.0
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 4.8e-60 235.0 181 63.0
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 8.2e-60 234.2 188 60.6
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 3.1e-59 232.3 181 60.2
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 4.1e-59 231.9 179 61.5
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 4.1e-59 231.9 186 60.8
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 4.1e-59 231.9 182 63.7
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 4.1e-59 231.9 177 61.6
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 6.9e-59 231.1 177 62.7
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 6.9e-59 231.1 177 62.1
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 6.9e-59 231.1 182 61.5
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 9.1e-59 230.7 178 62.9
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 9.1e-59 230.7 181 63.5
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 9.1e-59 230.7 177 63.8
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 1.2e-58 230.3 184 62.5
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 1.2e-58 230.3 177 62.1
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 1.5e-58 229.9 184 59.8
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 3.4e-58 228.8 185 57.3
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 4.5e-58 228.4 180 61.7
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 7.7e-58 227.6 163 65.0
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 7.7e-58 227.6 184 62.0
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 7.7e-58 227.6 182 60.4
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.7e-57 226.5 181 61.3
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.2e-57 226.1 182 58.2
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 3.8e-57 225.3 182 58.2
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 5.0e-57 224.9 185 59.5
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 6.5e-57 224.6 180 60.0
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 1.4e-56 223.4 181 58.0
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.5e-56 222.6 172 59.9
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 3.2e-56 222.2 178 60.1
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 3.2e-56 222.2 148 66.9
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 4.2e-56 221.9 188 58.0
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 7.2e-56 221.1 148 64.2
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 2.7e-55 219.2 148 65.5
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 3.6e-55 218.8 153 64.1
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 4.7e-55 218.4 155 64.5
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 6.1e-55 218.0 186 55.4
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 1.4e-54 216.9 181 59.7
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 2.3e-54 216.1 182 56.0
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 7.4e-53 211.1 182 54.4
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 1.7e-52 209.9 183 56.3
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 1.1e-51 207.2 180 51.1
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 5.3e-51 204.9 171 57.9
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 7.0e-51 204.5 204 51.5
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 2.0e-50 203.0 185 55.1
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 2.6e-50 202.6 175 60.0
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 3.5e-50 202.2 182 53.8
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 7.7e-50 201.1 174 57.5
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 1.0e-49 200.7 177 55.4
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 2.5e-48 196.1 183 55.2
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 9.4e-48 194.1 163 57.1
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 1.1e-43 180.6 169 52.1
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 4.1e-43 178.7 166 51.8
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 1.3e-41 173.7 181 48.1
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 1.6e-39 166.8 143 61.5
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 1.6e-39 166.8 165 50.3
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 2.1e-39 166.4 159 49.7
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 3.7e-36 155.6 118 64.4
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.2e-34 150.6 157 45.9
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.2e-34 150.6 157 45.9
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 2.7e-34 149.4 119 65.5
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 1.7e-33 146.7 131 59.5
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 3.8e-33 145.6 111 62.2
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 8.5e-33 144.4 150 44.7
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.7e-31 139.4 107 65.4
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 1.8e-30 136.7 107 63.6
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 1.7e-28 130.2 118 57.6
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 1.2e-26 124.0 154 40.3
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 6.3e-20 101.7 70 61.4
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 5.4e-19 98.6 154 34.4
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 3.5e-18 95.9 74 56.8
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 5.9e-18 95.1 71 59.2
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.3e-17 94.0 104 44.2
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 8.6e-17 91.3 90 52.2
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 1.1e-16 90.9 86 48.8
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.9e-16 90.1 67 58.2
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 1.5e-13 80.5 61 63.9
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 8.3e-12 74.7 73 58.9
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 7.8e-10 68.2 115 40.9
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.9e-08 63.5 143 21.7


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