Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 4.8e-82 307.8 152 100.0
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 4.8e-82 307.8 152 100.0
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 5.9e-56 221.1 118 94.1
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 7.7e-48 194.1 150 69.3
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 5.5e-46 188.0 141 73.0
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.0e-44 182.2 150 64.7
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.6e-40 169.9 150 60.0
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.9e-39 165.6 151 58.9
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.1e-37 159.5 151 57.6
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 2.0e-35 152.9 148 56.1
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 1.2e-32 143.7 148 48.0
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 2.7e-32 142.5 148 48.0
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 1.0e-31 140.6 151 47.0
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 1.3e-31 140.2 114 64.9
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.3e-31 140.2 140 57.9
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 2.9e-31 139.0 148 47.3
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.8e-31 138.7 148 48.0
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 3.8e-31 138.7 148 47.3
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 1.9e-30 136.3 150 51.3
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 3.2e-30 135.6 148 46.6
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 7.2e-30 134.4 151 48.3
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 7.2e-30 134.4 151 48.3
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 9.4e-30 134.0 148 46.6
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 9.4e-30 134.0 148 46.6
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 2.7e-29 132.5 148 48.0
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 3.6e-29 132.1 151 45.0
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-28 130.2 148 45.3
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 1.4e-28 130.2 148 45.3
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.3e-28 129.4 149 44.3
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.3e-28 129.4 148 46.6
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 3.0e-28 129.0 150 46.0
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 3.0e-28 129.0 150 46.0
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 3.0e-28 129.0 148 44.6
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 3.0e-28 129.0 148 44.6
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.0e-27 126.3 150 43.3
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 5.7e-27 124.8 142 47.2
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 5.7e-27 124.8 142 47.2
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.7e-26 122.1 149 43.6
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 1.1e-25 120.6 151 45.7
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 1.1e-25 120.6 151 45.7
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 9.1e-25 117.5 147 42.2
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 9.1e-25 117.5 149 43.0
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 2.9e-23 112.5 151 45.7
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 5.0e-23 111.7 149 40.3
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 1.6e-21 106.7 136 44.9
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 1.6e-21 106.7 159 39.6
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 8.0e-21 104.4 132 41.7
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 1.8e-20 103.2 148 39.9
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.3e-20 102.8 124 44.4
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 2.3e-20 102.8 136 41.2
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 4.0e-20 102.1 136 41.2
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 4.0e-20 102.1 136 41.2
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 5.2e-20 101.7 83 59.0
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 8.8e-20 100.9 136 41.2
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 8.8e-20 100.9 136 41.2
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 8.8e-20 100.9 136 41.2
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-19 100.1 112 44.6
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.6e-19 99.4 131 41.2
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 4.4e-19 98.6 136 40.4
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 7.5e-19 97.8 146 40.4
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 9.8e-19 97.4 114 43.0
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 2.8e-18 95.9 148 34.5
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 3.7e-18 95.5 136 39.7
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 6.3e-18 94.7 59 69.5
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 1.8e-17 93.2 101 45.5
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 2.3e-15 86.3 123 40.7
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 5.0e-15 85.1 119 41.2
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-14 83.6 151 36.4
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.1e-13 79.7 64 53.1
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.0e-12 77.4 85 45.9
BcaB03g15526 Brassica carinata HOM05D007954 ORTHO05D010124 1.3e-10 70.5 55 69.1
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 1.8e-09 66.6 88 42.0
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 9.2e-09 64.3 56 48.2
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 7.8e-08 61.2 112 35.7


User provided reference genes

Program Settings