Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46219 Brassica carinata HOM05D000123 ORTHO05D000064 3.4e-50 201.4 106 100.0
BcaB03g15144 Brassica carinata HOM05D000123 ORTHO05D000064 1.4e-48 196.1 103 100.0
A07p34500 Brassica napus HOM05D000123 ORTHO05D000064 1.3e-41 172.9 107 88.8
BolC6t39226H Brassica oleracea HOM05D000123 ORTHO05D000064 7.0e-40 167.2 105 89.5
BcaC08g46224 Brassica carinata HOM05D000123 ORTHO05D000064 2.7e-39 165.2 105 88.6
C06p42010 Brassica napus HOM05D000123 ORTHO05D000064 2.7e-39 165.2 105 88.6
AT1G67970 Arabidopsis thaliana HOM05D000123 ORTHO05D000064 7.5e-34 147.1 103 76.7
AL2G26950 Arabidopsis lyrata HOM05D000123 ORTHO05D000064 1.6e-31 139.4 103 76.7
BcaB05g24326 Brassica carinata HOM05D000123 ORTHO05D000064 1.7e-30 136.0 103 76.7
BolC2t08496H Brassica oleracea HOM05D000123 ORTHO05D000064 2.6e-26 122.1 103 67.0
A02p14580 Brassica napus HOM05D000123 ORTHO05D000064 4.9e-25 117.9 103 66.0
BcaC03g14890 Brassica carinata HOM05D000123 ORTHO05D000064 5.4e-24 114.4 103 66.0
C02p23650 Brassica napus HOM05D000123 ORTHO05D000064 5.4e-24 114.4 103 66.0
Sp5g22990 Schrenkiella parvula HOM05D000123 ORTHO05D000064 3.3e-21 105.1 103 61.2
Aa31LG1G13380 Aethionema arabicum HOM05D000123 ORTHO05D000064 4.0e-19 98.2 106 58.5
Carub.0002s1446 Capsella rubella HOM05D000123 ORTHO05D000064 5.8e-18 94.4 104 54.8
THA.LOC104825575 Tarenaya hassleriana HOM05D000123 ORTHO05D000064 1.7e-17 92.8 102 52.9
Thhalv10018723m.g Eutrema salsugineum HOM05D000123 ORTHO05D000064 4.1e-16 88.2 72 73.6
CARHR060620 Cardamine hirsuta HOM05D000123 ORTHO05D000064 1.0e-14 83.6 105 53.3
Ciclev10015541m.g Citrus clementina HOM05D000123 ORTHO05D000064 2.7e-07 58.9 105 41.0
MD13G1018800 Malus domestica HOM05D000123 ORTHO05D000064 1.7e-06 56.2 102 37.3
Potri.010G104300 Populus trichocarpa HOM05D000123 ORTHO05D000064 5.1e-06 54.7 102 39.2


User provided reference genes

Program Settings