Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46127 Brassica carinata HOM05D000005 ORTHO05D000449 1.1e-110 403.3 202 100.0
A07p33660 Brassica napus HOM05D000005 ORTHO05D000449 6.7e-100 367.5 202 86.6
C06p40220 Brassica napus HOM05D000005 ORTHO05D005456 1.5e-91 339.7 179 94.4
BcaB03g15226 Brassica carinata HOM05D000005 ORTHO05D000449 1.6e-69 266.5 233 62.7
CARHR175060 Cardamine hirsuta HOM05D000005 ORTHO05D000449 3.3e-22 109.4 135 44.4
Carub.0008s0141 Capsella rubella HOM05D000005 ORTHO05D000449 1.5e-19 100.5 140 45.0
Carub.0008s0139 Capsella rubella HOM05D000005 ORTHO05D000449 4.9e-18 95.5 132 43.2
Carub.0008s0143 Capsella rubella HOM05D000005 ORTHO05D000449 3.2e-17 92.8 149 40.9
Sp2g11310 Schrenkiella parvula HOM05D000005 ORTHO05D000449 5.5e-17 92.0 150 36.7
AT5G46510 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 2.1e-16 90.1 114 45.6
AL8G11910 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 3.5e-16 89.4 128 42.2
AT5G46520 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 1.0e-15 87.8 143 40.6
AT5G40060 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 2.3e-15 86.7 132 37.9
BcaC06g31469 Brassica carinata HOM05D000005 ORTHO05D000449 1.5e-14 84.0 159 36.5
AT5G46260 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 1.9e-14 83.6 164 40.9
AT5G46270 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 3.3e-14 82.8 155 37.4
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 4.3e-14 82.4 108 42.6
BcaC06g31471 Brassica carinata HOM05D000005 ORTHO05D000449 5.7e-14 82.0 113 37.2
CARHR175170 Cardamine hirsuta HOM05D000005 ORTHO05D019744 7.4e-14 81.6 138 37.7
A06p45900 Brassica napus HOM05D000005 ORTHO05D000449 2.1e-13 80.1 132 35.6
AL8G12190 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 1.4e-12 77.4 147 38.8
CARHR175160 Cardamine hirsuta HOM05D000005 ORTHO05D019744 1.8e-12 77.0 83 45.8
BcaC06g34374 Brassica carinata HOM05D000005 ORTHO05D000449 3.1e-12 76.3 129 37.2
AL8G11940 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 1.5e-11 73.9 127 37.8
BolC7t43520H Brassica oleracea HOM05D000005 ORTHO05D000449 3.4e-11 72.8 117 35.0
C07p29700 Brassica napus HOM05D000005 ORTHO05D000449 4.5e-11 72.4 114 32.5
Thhalv10003136m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 5.8e-11 72.0 114 41.2
AT5G46500 Arabidopsis thaliana HOM05D000005 ORTHO05D019744 1.0e-10 71.2 151 38.4
Carub.0006s2040 Capsella rubella HOM05D000005 ORTHO05D000449 1.0e-10 71.2 128 35.9
AT4G08450 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 1.3e-10 70.9 113 33.6
AT5G22690 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 1.3e-10 70.9 132 34.1
C02p47400 Brassica napus HOM05D000005 ORTHO05D000449 1.3e-10 70.9 135 36.3
C09p28630 Brassica napus HOM05D000005 ORTHO05D000449 2.2e-10 70.1 123 36.6
BcaB07g30834 Brassica carinata HOM05D000005 ORTHO05D000449 6.5e-10 68.6 188 29.8
BcaB07g33583 Brassica carinata HOM05D000005 ORTHO05D000449 6.5e-10 68.6 131 36.6
BcaC03g16852 Brassica carinata HOM05D000005 ORTHO05D000449 6.5e-10 68.6 135 34.8
CARHR175260 Cardamine hirsuta HOM05D000005 ORTHO05D000449 6.5e-10 68.6 130 33.1
A09p22360 Brassica napus HOM05D000005 ORTHO05D000449 5.5e-09 65.5 123 35.8
AL6G42230 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 7.1e-09 65.1 88 38.6
BcaB07g30836 Brassica carinata HOM05D000005 ORTHO05D000449 7.1e-09 65.1 161 34.2
BcaB07g30835 Brassica carinata HOM05D000005 ORTHO05D000449 9.3e-09 64.7 159 29.6
BcaC01g00216 Brassica carinata HOM05D000005 ORTHO05D000449 3.5e-08 62.8 165 30.9
BolC3t19953H Brassica oleracea HOM05D000005 ORTHO05D000449 3.5e-08 62.8 165 30.9
C03p77010 Brassica napus HOM05D000005 ORTHO05D040495 6.1e-08 62.0 134 32.8
CARHR116330 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.0e-07 61.2 139 30.9
A02p29940 Brassica napus HOM05D000005 ORTHO05D000449 1.3e-07 60.8 135 31.9
BraA09t37839Z Brassica rapa HOM05D000005 ORTHO05D000449 1.3e-07 60.8 123 34.1
AL8G11920 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 1.8e-07 60.5 113 38.1
CARHR175090 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.8e-07 60.5 82 39.0
Carub.0005s0692 Capsella rubella HOM05D000005 ORTHO05D000449 3.0e-07 59.7 138 33.3
Thhalv10001229m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 5.1e-07 58.9 71 47.9
BraA02t08057Z Brassica rapa HOM05D000005 ORTHO05D000449 3.3e-06 56.2 112 30.4


User provided reference genes

Program Settings