Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g45736 Brassica carinata HOM05D000209 ORTHO05D000129 3.2e-33 144.4 69 100.0
BcaB04g17084 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-17 92.8 60 70.0
BcaC08g44085 Brassica carinata HOM05D000209 ORTHO05D000129 1.9e-17 92.0 60 73.3
BcaB02g10951 Brassica carinata HOM05D000209 ORTHO05D000129 3.5e-16 87.8 60 68.3
BcaC08g43521 Brassica carinata HOM05D000209 ORTHO05D000129 3.5e-16 87.8 60 68.3
BcaC01g01386 Brassica carinata HOM05D000209 ORTHO05D000129 4.6e-16 87.4 60 68.3
C03p91460 Brassica napus HOM05D000209 ORTHO05D000129 4.6e-16 87.4 60 68.3
BolC3t21464H Brassica oleracea HOM05D000209 ORTHO05D000129 4.6e-16 87.4 60 68.3
BraA08t32214Z Brassica rapa HOM05D000209 ORTHO05D000129 2.3e-15 85.1 60 66.7
A05p18360 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-15 84.7 60 63.3
BraA05t20726Z Brassica rapa HOM05D000209 ORTHO05D000129 3.0e-15 84.7 60 63.3
BcaB02g10890 Brassica carinata HOM05D000209 ORTHO05D000129 3.9e-15 84.3 60 65.0
BcaB04g17085 Brassica carinata HOM05D000209 ORTHO05D000129 3.9e-15 84.3 61 65.6
BolC6t38624H Brassica oleracea HOM05D000209 ORTHO05D000129 3.9e-15 84.3 38 100.0
BcaC08g44082 Brassica carinata HOM05D000209 ORTHO05D000129 5.1e-15 84.0 60 65.0
BcaB01g02527 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-14 82.8 62 64.5
C06p14860 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-14 82.4 61 65.6
BolC6t36664H Brassica oleracea HOM05D000209 ORTHO05D000129 1.5e-14 82.4 61 65.6
A08p01610 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-14 82.0 60 63.3
AL3G30600 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.5e-14 81.6 60 63.3
BcaNung01175 Brassica carinata HOM05D000209 ORTHO05D000129 5.6e-14 80.5 61 63.9
BolC6t36595H Brassica oleracea HOM05D001962 ORTHO05D002236 1.3e-13 79.3 64 62.5
AL4G15010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.8e-13 77.4 60 60.0
AT3G17540 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-12 76.3 61 59.0
BcaB02g10950 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-12 76.3 60 56.7
Carub.0004s0385 Capsella rubella HOM05D000209 ORTHO05D000129 1.8e-12 75.5 60 58.3
BcaB04g17082 Brassica carinata HOM05D000209 ORTHO05D000129 4.0e-12 74.3 60 58.3
A05p18310 Brassica napus HOM05D000209 ORTHO05D000129 4.0e-12 74.3 61 62.3
BraA05t20724Z Brassica rapa HOM05D000209 ORTHO05D000129 4.0e-12 74.3 61 62.3
Carub.0004s0386 Capsella rubella HOM05D000209 ORTHO05D000129 6.9e-12 73.6 60 58.3
BcaB02g10954 Brassica carinata HOM05D000209 ORTHO05D000129 9.0e-12 73.2 60 58.3
AL3G30320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-11 72.4 60 58.3
CARHR092860 Cardamine hirsuta HOM05D000209 ORTHO05D000129 9.9e-11 69.7 60 56.7
AT2G24510 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.4e-10 66.6 55 56.4
AT3G17265 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.4e-09 63.9 59 52.5
Sp3g21250 Schrenkiella parvula HOM05D000209 ORTHO05D000129 5.4e-09 63.9 64 56.2
BraA01t03277Z Brassica rapa HOM05D000209 ORTHO05D000129 7.1e-09 63.5 64 51.6
BcaB04g20440 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-08 62.4 63 54.0
Thhalv10015377m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.7e-08 61.6 61 49.2
BcaC02g12696 Brassica carinata HOM05D000209 ORTHO05D000129 3.5e-08 61.2 64 54.7
BolC6t35986H Brassica oleracea HOM05D000209 ORTHO05D000129 3.5e-08 61.2 59 54.2
Thhalv10022377m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.5e-08 61.2 61 49.2
AL3G30570 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.6e-08 60.8 62 48.4
Carub.0003s1724 Capsella rubella HOM05D000209 ORTHO05D000129 4.6e-08 60.8 62 54.8
Thhalv10003403m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.9e-08 60.1 59 52.5
Thhalv10022393m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.9e-08 60.1 60 50.0
AT3G17530 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.0e-07 59.7 60 46.7
BcaB04g20836 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-07 59.7 69 44.9
Thhalv10021918m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.3e-07 58.5 63 52.4
A05p30170 Brassica napus HOM05D000209 ORTHO05D000129 3.9e-07 57.8 64 50.0
BolC6t35985H Brassica oleracea HOM05D000209 ORTHO05D000129 5.1e-07 57.4 60 50.0
Thhalv10026768m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.1e-07 57.4 64 46.9
AT3G25460 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.7e-07 57.0 63 49.2
Sp7g11920 Schrenkiella parvula HOM05D000209 ORTHO05D000129 6.7e-07 57.0 65 52.3
AL3G30310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.7e-07 56.6 60 48.3
AT2G04920 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.7e-07 56.6 63 52.4
BcaC02g12818 Brassica carinata HOM05D000209 ORTHO05D000129 8.7e-07 56.6 64 53.1
A01p36780 Brassica napus HOM05D000209 ORTHO05D000129 8.7e-07 56.6 62 45.2
C04p01670 Brassica napus HOM05D000209 ORTHO05D000129 8.7e-07 56.6 64 53.1
BolC4t21819H Brassica oleracea HOM05D000209 ORTHO05D000129 8.7e-07 56.6 64 53.1
BolC4t21842H Brassica oleracea HOM05D000209 ORTHO05D000129 8.7e-07 56.6 64 53.1
BraA01t03739Z Brassica rapa HOM05D000209 ORTHO05D000129 8.7e-07 56.6 62 45.2
AL3G37010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-06 55.8 75 48.0
AL3G42550 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-06 55.8 63 52.4
Carub.0002s0776 Capsella rubella HOM05D000209 ORTHO05D000129 1.5e-06 55.8 61 50.8
CARHR099220 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.5e-06 55.8 62 45.2
AL3G42740 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.9e-06 55.5 61 54.1
BcaC01g00572 Brassica carinata HOM05D000209 ORTHO05D000129 1.9e-06 55.5 66 45.5
C01p40140 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-06 55.5 71 45.1
C03p81480 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-06 55.5 66 45.5
BolC3t20419H Brassica oleracea HOM05D000209 ORTHO05D000129 1.9e-06 55.5 66 45.5
BraA05t21857Z Brassica rapa HOM05D000209 ORTHO05D000129 1.9e-06 55.5 65 47.7
Thhalv10002915m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.5e-06 55.1 60 41.7
AT1G25141 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.3e-06 54.7 65 47.7
AT3G22730 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.3e-06 54.7 62 48.4
C06p09130 Brassica napus HOM05D000209 ORTHO05D000129 3.3e-06 54.7 42 61.9
Thhalv10002981m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.3e-06 54.7 66 50.0
BcaB04g19128 Brassica carinata HOM05D000209 ORTHO05D000129 4.3e-06 54.3 71 42.3
BcaC01g03226 Brassica carinata HOM05D000209 ORTHO05D000129 4.3e-06 54.3 64 48.4
BcaC09g48713 Brassica carinata HOM05D000209 ORTHO05D000129 4.3e-06 54.3 62 43.5
C03p54560 Brassica napus HOM05D000209 ORTHO05D000129 4.3e-06 54.3 64 48.4
BolC3t17743H Brassica oleracea HOM05D000209 ORTHO05D000129 4.3e-06 54.3 64 48.4
BraA03t13547Z Brassica rapa HOM05D000209 ORTHO05D000129 4.3e-06 54.3 64 48.4
Carub.0003s1721 Capsella rubella HOM05D000209 ORTHO05D000129 4.3e-06 54.3 60 50.0
Carub.0003s1727 Capsella rubella HOM05D000209 ORTHO05D000129 4.3e-06 54.3 62 45.2
Thhalv10002795m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.3e-06 54.3 65 50.8
Thhalv10022026m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.3e-06 54.3 55 52.7
AL4G22690 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.6e-06 53.9 65 50.8
Carub.0002s0273 Capsella rubella HOM05D000209 ORTHO05D000129 5.6e-06 53.9 61 50.8
Thhalv10027248m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.6e-06 53.9 61 47.5
A01p35620 Brassica napus HOM05D000209 ORTHO05D000129 7.4e-06 53.5 60 45.0
BraA01t03643Z Brassica rapa HOM05D000209 ORTHO05D000129 7.4e-06 53.5 60 45.0
A09p46090 Brassica napus HOM05D000209 ORTHO05D000129 9.6e-06 53.1 63 47.6
BolC4t21828H Brassica oleracea HOM05D000209 ORTHO05D000129 9.6e-06 53.1 64 50.0
CARHR092830 Cardamine hirsuta HOM05D000209 ORTHO05D000129 9.6e-06 53.1 63 46.0
Thhalv10023095m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 9.6e-06 53.1 55 49.1


User provided reference genes

Program Settings